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The map label for this gene is 182680124

Identifier: 182680124

GI number: 182680124

Start: 3664395

End: 3664904

Strand: Reverse

Name: 182680124

Synonym: Bind_3221

Alternate gene names: NA

Gene position: 3664904-3664395 (Counterclockwise)

Preceding gene: 182680125

Following gene: 182680123

Centisome position: 87.88

GC content: 64.51

Gene sequence:

>510_bases
ATGGACGGAATTCGCTTCCCCGCGGCAGGGCGCATCGGCCTTCCGACAATCATGGCCCTATCAGCGCTCGCTGGCTGTGC
CGTCGCCCCGCAAGCCCCTTCGCAACCGCTCGTCGCCGCGCGGGCCTTGCAGATCGATCCCGAAGCGGCGCGCGGCTTGA
TTTCGACCTACCGGGGTGAGCGGGGACTGGCTCCCGTCAGGCTCGATCCCACCTTGCGGACATTGGCGCAGGATCAGGCC
GATGCCATGGCGAAGGCGGATCATTTGAGCCATGAGGTGCAAGGACCGCTGTCGACAAGGCTCGCGCGGGCGCGGCTTGC
CCAGGCGACGGCTGTGGAAAATGTTTCAGCGGGTTATGCGACGACGCAAGCGGTTTTCGTCGGCTGGTGTCGTTCGCCGG
CCCATAATGCCAATCTGCTCGATCCGGCCATGCGCCGGATGGGCATAGCGGCGGCGGAAGCACCGGGCACACGCTATAAA
TTCTATTGGGCCTTGGTCATGACGGATTGA

Upstream 100 bases:

>100_bases
TCCGCCGATGCGGAAACAGCCGATAGCCCCTCGATCACCGATTTGCAGAAAGCCGAAGTGCTGCTTCAACGCGCTGGCAA
CGGGCGCTGAACTCCCGCGC

Downstream 100 bases:

>100_bases
CGGTCATCGTAGCGTCGGCTTTGACTCTCAGGATCTGTCGGAGATGACGCTTATGCCCGTGACCTTGCTTGAACGGCGCC
GTATTGAGGCGGAATTCATC

Product: SCP-like extracellular

Products: NA

Alternate protein names: Allergen V5/Tpx-1 Family Protein; Allergen V5/Tpx-1 ; SCP-Like Extracellular Protein; Allergen V5/Tpx-1-Like Protein

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MDGIRFPAAGRIGLPTIMALSALAGCAVAPQAPSQPLVAARALQIDPEAARGLISTYRGERGLAPVRLDPTLRTLAQDQA
DAMAKADHLSHEVQGPLSTRLARARLAQATAVENVSAGYATTQAVFVGWCRSPAHNANLLDPAMRRMGIAAAEAPGTRYK
FYWALVMTD

Sequences:

>Translated_169_residues
MDGIRFPAAGRIGLPTIMALSALAGCAVAPQAPSQPLVAARALQIDPEAARGLISTYRGERGLAPVRLDPTLRTLAQDQA
DAMAKADHLSHEVQGPLSTRLARARLAQATAVENVSAGYATTQAVFVGWCRSPAHNANLLDPAMRRMGIAAAEAPGTRYK
FYWALVMTD
>Mature_169_residues
MDGIRFPAAGRIGLPTIMALSALAGCAVAPQAPSQPLVAARALQIDPEAARGLISTYRGERGLAPVRLDPTLRTLAQDQA
DAMAKADHLSHEVQGPLSTRLARARLAQATAVENVSAGYATTQAVFVGWCRSPAHNANLLDPAMRRMGIAAAEAPGTRYK
FYWALVMTD

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17876; Mature: 17876

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGIRFPAAGRIGLPTIMALSALAGCAVAPQAPSQPLVAARALQIDPEAARGLISTYRGE
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHEECCHHHHHHHHHHHCCC
RGLAPVRLDPTLRTLAQDQADAMAKADHLSHEVQGPLSTRLARARLAQATAVENVSAGYA
CCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCH
TTQAVFVGWCRSPAHNANLLDPAMRRMGIAAAEAPGTRYKFYWALVMTD
HHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHCCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MDGIRFPAAGRIGLPTIMALSALAGCAVAPQAPSQPLVAARALQIDPEAARGLISTYRGE
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHEECCHHHHHHHHHHHCCC
RGLAPVRLDPTLRTLAQDQADAMAKADHLSHEVQGPLSTRLARARLAQATAVENVSAGYA
CCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCH
TTQAVFVGWCRSPAHNANLLDPAMRRMGIAAAEAPGTRYKFYWALVMTD
HHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA