| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182680121
Identifier: 182680121
GI number: 182680121
Start: 3662253
End: 3662687
Strand: Reverse
Name: 182680121
Synonym: Bind_3218
Alternate gene names: NA
Gene position: 3662687-3662253 (Counterclockwise)
Preceding gene: 182680122
Following gene: 182680120
Centisome position: 87.83
GC content: 57.7
Gene sequence:
>435_bases ATGGCACATTGGCTGATCAAGAGCGAGCCGAACAAATGGTCCTGGGATGACCAGGTCAAGGCCGCGCGCGAGGGAACCTT CTGGAACGGCGTGCGCAATCACCTCGCCAAGCAGCATTTGATGGCGATGAAAGTCGGCGAACAGGTCTTTTTCTATCATT CCAATATCGGCAAGGCGGTCGTCGGCATCGCCGAGGTCATCAAACCTTATTATCCGGATCCCTCCGATGCGACCGGCAAA TTCGGTATGGTGGATGTCAGGGCGCGCCAGCCTTTCGCCAAACCGGTGACGCTTGAGGCGATCAAGGCGGATCCCCGGCT CTCCGACATGATCCTCGTCAATAATTCCAGGCTGTCGGTGCAGCCGGTCACGGATGAGGAATGGACGATCATTTGCGGCC TCGGCGAGCCGGGAAAAGTCTATGCCTTCGCCTGA
Upstream 100 bases:
>100_bases TGGGTGTCGACGAAGCGATTGCCACCTTGCTGGCGCGTCCATCCAAGGCGGAACTGGCGGGTTTTTGAGGAACGCGGCGC GGTTTAGGAGCTAGGCACGG
Downstream 100 bases:
>100_bases GAAGAGTTGACGCGGAAATGTCTCGCGGGCACATGAAGGATCGAAATGCTCGTGCGACTGGTCGTCAGGAACGATCGTCC GCACGTTTTCCGATATTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MAHWLIKSEPNKWSWDDQVKAAREGTFWNGVRNHLAKQHLMAMKVGEQVFFYHSNIGKAVVGIAEVIKPYYPDPSDATGK FGMVDVRARQPFAKPVTLEAIKADPRLSDMILVNNSRLSVQPVTDEEWTIICGLGEPGKVYAFA
Sequences:
>Translated_144_residues MAHWLIKSEPNKWSWDDQVKAAREGTFWNGVRNHLAKQHLMAMKVGEQVFFYHSNIGKAVVGIAEVIKPYYPDPSDATGK FGMVDVRARQPFAKPVTLEAIKADPRLSDMILVNNSRLSVQPVTDEEWTIICGLGEPGKVYAFA >Mature_143_residues AHWLIKSEPNKWSWDDQVKAAREGTFWNGVRNHLAKQHLMAMKVGEQVFFYHSNIGKAVVGIAEVIKPYYPDPSDATGKF GMVDVRARQPFAKPVTLEAIKADPRLSDMILVNNSRLSVQPVTDEEWTIICGLGEPGKVYAFA
Specific function: Unknown
COG id: COG2947
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI83267861, Length=167, Percent_Identity=33.5329341317365, Blast_Score=91, Evalue=4e-19, Organism=Homo sapiens, GI40806221, Length=167, Percent_Identity=33.5329341317365, Blast_Score=91, Evalue=4e-19, Organism=Homo sapiens, GI7661804, Length=167, Percent_Identity=33.5329341317365, Blast_Score=91, Evalue=4e-19, Organism=Homo sapiens, GI83267859, Length=82, Percent_Identity=41.4634146341463, Blast_Score=72, Evalue=2e-13, Organism=Homo sapiens, GI40806219, Length=82, Percent_Identity=41.4634146341463, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16172; Mature: 16041
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHWLIKSEPNKWSWDDQVKAAREGTFWNGVRNHLAKQHLMAMKVGEQVFFYHSNIGKAV CCCEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHH VGIAEVIKPYYPDPSDATGKFGMVDVRARQPFAKPVTLEAIKADPRLSDMILVNNSRLSV HHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCEEEEEECCEEEE QPVTDEEWTIICGLGEPGKVYAFA EECCCCCEEEEEECCCCCEEEEEC >Mature Secondary Structure AHWLIKSEPNKWSWDDQVKAAREGTFWNGVRNHLAKQHLMAMKVGEQVFFYHSNIGKAV CCEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHH VGIAEVIKPYYPDPSDATGKFGMVDVRARQPFAKPVTLEAIKADPRLSDMILVNNSRLSV HHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCEEEEEECCEEEE QPVTDEEWTIICGLGEPGKVYAFA EECCCCCEEEEEECCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA