| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182680065
Identifier: 182680065
GI number: 182680065
Start: 3609603
End: 3610457
Strand: Reverse
Name: 182680065
Synonym: Bind_3161
Alternate gene names: NA
Gene position: 3610457-3609603 (Counterclockwise)
Preceding gene: 182680066
Following gene: 182680064
Centisome position: 86.58
GC content: 60.12
Gene sequence:
>855_bases GTGGCGGCGATTTACTGGCTGAACTTCGATCTTGGCCGGACCTTTGGCTTGGTCGGCTTGATATTTCTTTCTCTCCTTCA GCCAGCCCGCGCCGCGATGCCAGCCTCCTGCCCGGCGCAGGGGGAAAAGACTGGCACGGTCACGGAGATCGACGAGCAAC TGGACATTGCCTTGGCGGATGGCACGCGGCTCGGCCTTGTCGGCATCGAGCCGCCACGCCCGACCGCTCTCGATGGAGCC CTCGATTCGAAAATCCGGGATCAGCTGCGCGCCTGGCTTTTGGACCATGAGGTGACTTATGTGCCTGCGGGCAATGGGCC TGACCGCTGGGGGCGAGTGCCGGCCTTCGTTTTTGCGCCGGCGGGCGAGGGGATGATTTCGGTTAATGAGGCGCTGCTCG ATGCCGGTTTCGCTCGTTATTTGCCCGGTGAGGCGGCCCATATCTGTCATGCCCGCCTGTTGGCCGCGGAGGCGGGTGCG CGCGAGGCGACGCTTGGTATTTGGCGAGATCCGTATTATGCGATAATTGATACAGGGAAACCTGCAATTTTTGAGGGAAA GGATGGGGCTCTCGCTCTCGTCGAGGGAAAAGTGACGCGAATCGCGCCGACGCGGTTTCGGACACGATTATATCTCGGTT CGAATGGGCCGCATGTTTTTACGATCACGGTGATACAGCGCGATATCAAGATGTTTGAGGCCGCGGGAATGCATGTGAGC CGATTGTTGGGCCAGACCCTGCGGGTCAGGGGGCTTCTTGATCTATCATTCGGTCCGGAGATCGAGGTGAGTCGTCCCGA TGCGCTCGAAATTATAGGCGAGGCGGCAAAAGCTCCTTCGGGCTTGGGGCGCTGA
Upstream 100 bases:
>100_bases GGAAACCGTTGCTCTATCCTGCTGAGCTACCGGGAGATAAGCTGCGCCGTAAAGCTTTGTCCAAGGTTCCTTAGCATATT TCCTTGAATGGACCAATGGC
Downstream 100 bases:
>100_bases CGCTTGCGGGGCTTGCTGTTTTCTCCCTTTGGCAAGTCCAGTTGTGTCCCCTCGCGCGGGTTGTGCTGCCTTGAGCTTGA CCGGTTGGCCTCGCGGCCTC
Product: nuclease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MAAIYWLNFDLGRTFGLVGLIFLSLLQPARAAMPASCPAQGEKTGTVTEIDEQLDIALADGTRLGLVGIEPPRPTALDGA LDSKIRDQLRAWLLDHEVTYVPAGNGPDRWGRVPAFVFAPAGEGMISVNEALLDAGFARYLPGEAAHICHARLLAAEAGA REATLGIWRDPYYAIIDTGKPAIFEGKDGALALVEGKVTRIAPTRFRTRLYLGSNGPHVFTITVIQRDIKMFEAAGMHVS RLLGQTLRVRGLLDLSFGPEIEVSRPDALEIIGEAAKAPSGLGR
Sequences:
>Translated_284_residues MAAIYWLNFDLGRTFGLVGLIFLSLLQPARAAMPASCPAQGEKTGTVTEIDEQLDIALADGTRLGLVGIEPPRPTALDGA LDSKIRDQLRAWLLDHEVTYVPAGNGPDRWGRVPAFVFAPAGEGMISVNEALLDAGFARYLPGEAAHICHARLLAAEAGA REATLGIWRDPYYAIIDTGKPAIFEGKDGALALVEGKVTRIAPTRFRTRLYLGSNGPHVFTITVIQRDIKMFEAAGMHVS RLLGQTLRVRGLLDLSFGPEIEVSRPDALEIIGEAAKAPSGLGR >Mature_283_residues AAIYWLNFDLGRTFGLVGLIFLSLLQPARAAMPASCPAQGEKTGTVTEIDEQLDIALADGTRLGLVGIEPPRPTALDGAL DSKIRDQLRAWLLDHEVTYVPAGNGPDRWGRVPAFVFAPAGEGMISVNEALLDAGFARYLPGEAAHICHARLLAAEAGAR EATLGIWRDPYYAIIDTGKPAIFEGKDGALALVEGKVTRIAPTRFRTRLYLGSNGPHVFTITVIQRDIKMFEAAGMHVSR LLGQTLRVRGLLDLSFGPEIEVSRPDALEIIGEAAKAPSGLGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30507; Mature: 30375
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: PS50830 TNASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAIYWLNFDLGRTFGLVGLIFLSLLQPARAAMPASCPAQGEKTGTVTEIDEQLDIALAD CEEEEEEECCHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCEEECCCEEEEEEC GTRLGLVGIEPPRPTALDGALDSKIRDQLRAWLLDHEVTYVPAGNGPDRWGRVPAFVFAP CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEEC AGEGMISVNEALLDAGFARYLPGEAAHICHARLLAAEAGAREATLGIWRDPYYAIIDTGK CCCCEEEHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEECCC PAIFEGKDGALALVEGKVTRIAPTRFRTRLYLGSNGPHVFTITVIQRDIKMFEAAGMHVS CEEEECCCCCEEEEECCEEEECCCEEEEEEEECCCCCEEEEEEEEHHHHHHHHHCCHHHH RLLGQTLRVRGLLDLSFGPEIEVSRPDALEIIGEAAKAPSGLGR HHHHHHHHEEEEEEECCCCCEEECCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AAIYWLNFDLGRTFGLVGLIFLSLLQPARAAMPASCPAQGEKTGTVTEIDEQLDIALAD EEEEEEECCHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCEEECCCEEEEEEC GTRLGLVGIEPPRPTALDGALDSKIRDQLRAWLLDHEVTYVPAGNGPDRWGRVPAFVFAP CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEEC AGEGMISVNEALLDAGFARYLPGEAAHICHARLLAAEAGAREATLGIWRDPYYAIIDTGK CCCCEEEHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEECCC PAIFEGKDGALALVEGKVTRIAPTRFRTRLYLGSNGPHVFTITVIQRDIKMFEAAGMHVS CEEEECCCCCEEEEECCEEEECCCEEEEEEEECCCCCEEEEEEEEHHHHHHHHHCCHHHH RLLGQTLRVRGLLDLSFGPEIEVSRPDALEIIGEAAKAPSGLGR HHHHHHHHEEEEEEECCCCCEEECCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA