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The map label for this gene is yfgC [H]

Identifier: 182680064

GI number: 182680064

Start: 3608055

End: 3609599

Strand: Reverse

Name: yfgC [H]

Synonym: Bind_3160

Alternate gene names: 182680064

Gene position: 3609599-3608055 (Counterclockwise)

Preceding gene: 182680065

Following gene: 182680062

Centisome position: 86.56

GC content: 62.07

Gene sequence:

>1545_bases
TTGCGGGGCTTGCTGTTTTCTCCCTTTGGCAAGTCCAGTTGTGTCCCCTCGCGCGGGTTGTGCTGCCTTGAGCTTGACCG
GTTGGCCTCGCGGCCTCGCAGTTTTGCGGTCTTGTTTTTCGTCTGCAGCCTTTGTGGCTGCGCGCCGATCGTGCCGCCGG
CAGCACCCCCTGCTGCGACCGGTGTACCCGTCGCAGCGCCGCGCACCATTGCACCGGAATCGCCGGTTTCGGCCGAGCAC
AAGCGGATGGTCGCCATGTTCGATGGCGAATATCACCATGCCGCGGCGGAACATTATCTCAATGAAGTGCTGGTGAAATT
GGCGCGGGCTGGCGCGGCCTCCGATCCGAATCTGCCCTACCGCGTCACTTTGTTGAATTCACCGACCGTCAACGCCTTCG
CCTTGCCGCCGAATGATCTCTATGTGACGCGCGGCCTCCTGGCGCTCGCCAATGATACCTCGGAAGTCGCGGCGGTCATG
GCGCATGAGATCAGCCACATCACCGCGCGCCATGCCATGCAGCGCGCGGAGGAGGAACGCCGCGCCGCCGTGATCAGCAA
GGCGGCCGCCATCATTCAGAACAAGCAGCGCGGCCAGGAAGTCGAAGCCGTGGCGAAGCGTACTCTGGCGCGCTTCTCGC
GACAGCAGGAGCTCGACGCCGATCAAAGCGGCATCCGGATCATCGCCAAGGCGGGTTATGATCCTTATGGCGCGTCGCGT
TTTCTGAGCGCGCTTGGTCGCTCGACGGAGTTGCGCAATGCCTTGATCGGCCAGGGCGGCGGCGACAGGCTGGACATTCT
GGCAACGCATCCCTCGACGCCGGAACGTGTTGAACAGGCGATCGCGGCGGCCCGCCAGATCGGTGCGCCGGGCATTGGCT
CGACAGGGCGTAACAGCTATCTCTCCGCGATCAACGGCGTGATGTTTGGCGATGATCCCGCCAATGGCGCGATCCGTGGC
CTGAAATTCATTCATCCCCGGTTGGGATTCGGCTTTGTCGCGCCAGAAGGATTCATGCTGGAAAATTCGGCTCAGGCCGT
GCTCGGCATTGCTGCTGGCGGCAATGAGGCCTTGCGGCTCGACAGCGTCAAGCTGCCCCAGACGACCGCGCTCGAAACCT
ATGCCAATTCCGGCTGGATCGACGGCCTCATTGCGTCCTCTCTCACGCCTGTCACGGTGGATGGCGCGCCCGCTTTGCTC
GCCCACGCGGAAGCCGGTGAATGGCATTTCCGCATTGCCGTCATTCGTTTCGACACGCAGCAGGTCTATCGTCTGATCTT
CGCGACACGGGTCATGACCGATGATGCCGAGCGCCGCTTCCAAGCCTCGATCGATTCGTTTCACCGAATCTCGCCGGAGG
AAGCGCGTGGCGTCCACCCCTTGCATATTGAGATCGTCACCGCCGAGGCTGGCGATACGCCGGAAACCATGGCGAAGAAA
ATGGTCGTGCCCAATCGCCCGCTGGATTATTTCCTGTTGATCAATGGCCGCGAGCCGGACTCTGTTTTGCGACCTGACGA
GCGTTACAAGATCGTCGTCGAATGA

Upstream 100 bases:

>100_bases
TGATCTATCATTCGGTCCGGAGATCGAGGTGAGTCGTCCCGATGCGCTCGAAATTATAGGCGAGGCGGCAAAAGCTCCTT
CGGGCTTGGGGCGCTGACGC

Downstream 100 bases:

>100_bases
AAAAAGCGGGAGCTATGCCCCCGCTTTTTCCTGGATAGAGATTTGATTGAAATCTAGAGATCCCGGAAAAATCCCCTGGC
TTAGTTTTCCTTCTGCGGCG

Product: peptidase M48 Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 514; Mature: 514

Protein sequence:

>514_residues
MRGLLFSPFGKSSCVPSRGLCCLELDRLASRPRSFAVLFFVCSLCGCAPIVPPAAPPAATGVPVAAPRTIAPESPVSAEH
KRMVAMFDGEYHHAAAEHYLNEVLVKLARAGAASDPNLPYRVTLLNSPTVNAFALPPNDLYVTRGLLALANDTSEVAAVM
AHEISHITARHAMQRAEEERRAAVISKAAAIIQNKQRGQEVEAVAKRTLARFSRQQELDADQSGIRIIAKAGYDPYGASR
FLSALGRSTELRNALIGQGGGDRLDILATHPSTPERVEQAIAAARQIGAPGIGSTGRNSYLSAINGVMFGDDPANGAIRG
LKFIHPRLGFGFVAPEGFMLENSAQAVLGIAAGGNEALRLDSVKLPQTTALETYANSGWIDGLIASSLTPVTVDGAPALL
AHAEAGEWHFRIAVIRFDTQQVYRLIFATRVMTDDAERRFQASIDSFHRISPEEARGVHPLHIEIVTAEAGDTPETMAKK
MVVPNRPLDYFLLINGREPDSVLRPDERYKIVVE

Sequences:

>Translated_514_residues
MRGLLFSPFGKSSCVPSRGLCCLELDRLASRPRSFAVLFFVCSLCGCAPIVPPAAPPAATGVPVAAPRTIAPESPVSAEH
KRMVAMFDGEYHHAAAEHYLNEVLVKLARAGAASDPNLPYRVTLLNSPTVNAFALPPNDLYVTRGLLALANDTSEVAAVM
AHEISHITARHAMQRAEEERRAAVISKAAAIIQNKQRGQEVEAVAKRTLARFSRQQELDADQSGIRIIAKAGYDPYGASR
FLSALGRSTELRNALIGQGGGDRLDILATHPSTPERVEQAIAAARQIGAPGIGSTGRNSYLSAINGVMFGDDPANGAIRG
LKFIHPRLGFGFVAPEGFMLENSAQAVLGIAAGGNEALRLDSVKLPQTTALETYANSGWIDGLIASSLTPVTVDGAPALL
AHAEAGEWHFRIAVIRFDTQQVYRLIFATRVMTDDAERRFQASIDSFHRISPEEARGVHPLHIEIVTAEAGDTPETMAKK
MVVPNRPLDYFLLINGREPDSVLRPDERYKIVVE
>Mature_514_residues
MRGLLFSPFGKSSCVPSRGLCCLELDRLASRPRSFAVLFFVCSLCGCAPIVPPAAPPAATGVPVAAPRTIAPESPVSAEH
KRMVAMFDGEYHHAAAEHYLNEVLVKLARAGAASDPNLPYRVTLLNSPTVNAFALPPNDLYVTRGLLALANDTSEVAAVM
AHEISHITARHAMQRAEEERRAAVISKAAAIIQNKQRGQEVEAVAKRTLARFSRQQELDADQSGIRIIAKAGYDPYGASR
FLSALGRSTELRNALIGQGGGDRLDILATHPSTPERVEQAIAAARQIGAPGIGSTGRNSYLSAINGVMFGDDPANGAIRG
LKFIHPRLGFGFVAPEGFMLENSAQAVLGIAAGGNEALRLDSVKLPQTTALETYANSGWIDGLIASSLTPVTVDGAPALL
AHAEAGEWHFRIAVIRFDTQQVYRLIFATRVMTDDAERRFQASIDSFHRISPEEARGVHPLHIEIVTAEAGDTPETMAKK
MVVPNRPLDYFLLINGREPDSVLRPDERYKIVVE

Specific function: Unknown

COG id: COG4784

COG function: function code R; Putative Zn-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=158, Percent_Identity=28.4810126582279, Blast_Score=75, Evalue=8e-15,
Organism=Saccharomyces cerevisiae, GI6322940, Length=218, Percent_Identity=24.3119266055046, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 55360; Mature: 55360

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: PS00732 RIBOSOMAL_S16

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGLLFSPFGKSSCVPSRGLCCLELDRLASRPRSFAVLFFVCSLCGCAPIVPPAAPPAAT
CCCCEECCCCCCCCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
GVPVAAPRTIAPESPVSAEHKRMVAMFDGEYHHAAAEHYLNEVLVKLARAGAASDPNLPY
CCCCCCCCCCCCCCCCCHHHCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE
RVTLLNSPTVNAFALPPNDLYVTRGLLALANDTSEVAAVMAHEISHITARHAMQRAEEER
EEEEECCCCCEEEECCCCCEEHHCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAAVISKAAAIIQNKQRGQEVEAVAKRTLARFSRQQELDADQSGIRIIAKAGYDPYGASR
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHH
FLSALGRSTELRNALIGQGGGDRLDILATHPSTPERVEQAIAAARQIGAPGIGSTGRNSY
HHHHHCCCHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHH
LSAINGVMFGDDPANGAIRGLKFIHPRLGFGFVAPEGFMLENSAQAVLGIAAGGNEALRL
HHHHCCCEECCCCCCCHHHHHHHHCCCCCCCEECCCCEEEECCCCEEEEEECCCCCEEEE
DSVKLPQTTALETYANSGWIDGLIASSLTPVTVDGAPALLAHAEAGEWHFRIAVIRFDTQ
CCCCCCCHHHHHHHCCCCCHHHHHHCCCCCEEECCCCCEEEECCCCCEEEEEEEEEECHH
QVYRLIFATRVMTDDAERRFQASIDSFHRISPEEARGVHPLHIEIVTAEAGDTPETMAKK
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHCCCCEEEEEEEEECCCCCHHHHHHH
MVVPNRPLDYFLLINGREPDSVLRPDERYKIVVE
CCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEC
>Mature Secondary Structure
MRGLLFSPFGKSSCVPSRGLCCLELDRLASRPRSFAVLFFVCSLCGCAPIVPPAAPPAAT
CCCCEECCCCCCCCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
GVPVAAPRTIAPESPVSAEHKRMVAMFDGEYHHAAAEHYLNEVLVKLARAGAASDPNLPY
CCCCCCCCCCCCCCCCCHHHCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE
RVTLLNSPTVNAFALPPNDLYVTRGLLALANDTSEVAAVMAHEISHITARHAMQRAEEER
EEEEECCCCCEEEECCCCCEEHHCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAAVISKAAAIIQNKQRGQEVEAVAKRTLARFSRQQELDADQSGIRIIAKAGYDPYGASR
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHH
FLSALGRSTELRNALIGQGGGDRLDILATHPSTPERVEQAIAAARQIGAPGIGSTGRNSY
HHHHHCCCHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHH
LSAINGVMFGDDPANGAIRGLKFIHPRLGFGFVAPEGFMLENSAQAVLGIAAGGNEALRL
HHHHCCCEECCCCCCCHHHHHHHHCCCCCCCEECCCCEEEECCCCEEEEEECCCCCEEEE
DSVKLPQTTALETYANSGWIDGLIASSLTPVTVDGAPALLAHAEAGEWHFRIAVIRFDTQ
CCCCCCCHHHHHHHCCCCCHHHHHHCCCCCEEECCCCCEEEECCCCCEEEEEEEEEECHH
QVYRLIFATRVMTDDAERRFQASIDSFHRISPEEARGVHPLHIEIVTAEAGDTPETMAKK
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHCCCCEEEEEEEEECCCCCHHHHHHH
MVVPNRPLDYFLLINGREPDSVLRPDERYKIVVE
CCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]