Definition Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome.
Accession NC_010581
Length 4,170,153

Click here to switch to the map view.

The map label for this gene is 182679956

Identifier: 182679956

GI number: 182679956

Start: 3474950

End: 3475909

Strand: Reverse

Name: 182679956

Synonym: Bind_3051

Alternate gene names: NA

Gene position: 3475909-3474950 (Counterclockwise)

Preceding gene: 182679957

Following gene: 182679953

Centisome position: 83.35

GC content: 52.92

Gene sequence:

>960_bases
ATGCTTTCCCGGACGGCTGATAATCTCTTCTGGCTTGCCCGCTATGTCGAGCGGGCTGATTTTCTCGCCCGCGTCATCGA
CGCGACGCAAAGGTTGAGCGCCTTGCCGACGACTTATGTCAGTACCGGCACCGAATGGGAAAGTGCGCTCGAATCCTCCG
GCGCGGCGGAAGGGTTTCGCGCCAAATATGAGACGATCGAGGCGGCGCGCGTCGTTGATTATCTCACTTTCTCGGCGGAT
AATCCGTCCTCGATCCGGAATTGTCTTGAATTTGCCAGAGCCAATGCCCGTTCCGTGCGAACCGCTTTGACACATGAGAC
CTGGGAAGCCATCAATGGGGCTTGGATCGAACTGAAACGGTTCGAGGGCACCAATCTCGCCAAGGGCCATTACGATCGCG
AGGAACTCTCCATATTCCTCGATTTCGTGAAAAAGACCTCACTCGATTATGACGGCACCGCCTATCGCACCATGCTGCGC
AATGATGCCTATTGGTTCTCGCGGCTTGGTTTGTATATCGAACGTGCCGACAATACGGCGCGTATTCTCGACGTCAAATA
TCACGTGCTGCTGCCAGAGGATGAGGAAGTCGGCGGCTCGCTCGATTATTTCCAATGGGCAGGCATTTTGCGCGCGGTGT
CAGCACTCACGGCATATCATTGGGTTTATCGTGAGACGATCAAGCCCTGGCGCATCGCTGATTTGTTGATCCTCAAGAAG
GAAATGCCGCGCTCTTTGATTTCTTGCTATGACAATATCTGTCATTTCCTCGATCAGATTTCTAGCGCCTATGGCCATAA
TGGGGCGGCCCAAAGGCAGGCGCATCTCGTGATGGAACGGCTATCGAAAGCGACGACCAAAGAGATTTTCCAGATGGGTC
TGCATGAATTCATCACGGCTTTCGTCGAAGATAATAGTCTTCTTGGTCAGACGATCAGCGAGCAATATTTGTTCAATTAG

Upstream 100 bases:

>100_bases
GTCTGATGCTCTCGTTGCGATGTCGAAAGAGTCTCCTTCCGCGTCACAATTCCGCATGATGTAAACGCATTGTTTTGTAA
ACAGGTCACCAAGGCACGCC

Downstream 100 bases:

>100_bases
AACATTGGCCGAAAAGCTAAGATCAAGGGTCGCGGATCGTGACCCATGGCCCCTTCCTTGTGTCTTCGCTTTTTCAGTGT
GAGCGACAATTCAAGAGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MLSRTADNLFWLARYVERADFLARVIDATQRLSALPTTYVSTGTEWESALESSGAAEGFRAKYETIEAARVVDYLTFSAD
NPSSIRNCLEFARANARSVRTALTHETWEAINGAWIELKRFEGTNLAKGHYDREELSIFLDFVKKTSLDYDGTAYRTMLR
NDAYWFSRLGLYIERADNTARILDVKYHVLLPEDEEVGGSLDYFQWAGILRAVSALTAYHWVYRETIKPWRIADLLILKK
EMPRSLISCYDNICHFLDQISSAYGHNGAAQRQAHLVMERLSKATTKEIFQMGLHEFITAFVEDNSLLGQTISEQYLFN

Sequences:

>Translated_319_residues
MLSRTADNLFWLARYVERADFLARVIDATQRLSALPTTYVSTGTEWESALESSGAAEGFRAKYETIEAARVVDYLTFSAD
NPSSIRNCLEFARANARSVRTALTHETWEAINGAWIELKRFEGTNLAKGHYDREELSIFLDFVKKTSLDYDGTAYRTMLR
NDAYWFSRLGLYIERADNTARILDVKYHVLLPEDEEVGGSLDYFQWAGILRAVSALTAYHWVYRETIKPWRIADLLILKK
EMPRSLISCYDNICHFLDQISSAYGHNGAAQRQAHLVMERLSKATTKEIFQMGLHEFITAFVEDNSLLGQTISEQYLFN
>Mature_319_residues
MLSRTADNLFWLARYVERADFLARVIDATQRLSALPTTYVSTGTEWESALESSGAAEGFRAKYETIEAARVVDYLTFSAD
NPSSIRNCLEFARANARSVRTALTHETWEAINGAWIELKRFEGTNLAKGHYDREELSIFLDFVKKTSLDYDGTAYRTMLR
NDAYWFSRLGLYIERADNTARILDVKYHVLLPEDEEVGGSLDYFQWAGILRAVSALTAYHWVYRETIKPWRIADLLILKK
EMPRSLISCYDNICHFLDQISSAYGHNGAAQRQAHLVMERLSKATTKEIFQMGLHEFITAFVEDNSLLGQTISEQYLFN

Specific function: Unknown

COG id: COG2307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36596; Mature: 36596

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSRTADNLFWLARYVERADFLARVIDATQRLSALPTTYVSTGTEWESALESSGAAEGFR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHCCCCHHHH
AKYETIEAARVVDYLTFSADNPSSIRNCLEFARANARSVRTALTHETWEAINGAWIELKR
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEE
FEGTNLAKGHYDREELSIFLDFVKKTSLDYDGTAYRTMLRNDAYWFSRLGLYIERADNTA
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHEEECCCCE
RILDVKYHVLLPEDEEVGGSLDYFQWAGILRAVSALTAYHWVYRETIKPWRIADLLILKK
EEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
EMPRSLISCYDNICHFLDQISSAYGHNGAAQRQAHLVMERLSKATTKEIFQMGLHEFITA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVEDNSLLGQTISEQYLFN
HHCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MLSRTADNLFWLARYVERADFLARVIDATQRLSALPTTYVSTGTEWESALESSGAAEGFR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHCCCCHHHH
AKYETIEAARVVDYLTFSADNPSSIRNCLEFARANARSVRTALTHETWEAINGAWIELKR
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEE
FEGTNLAKGHYDREELSIFLDFVKKTSLDYDGTAYRTMLRNDAYWFSRLGLYIERADNTA
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHEEECCCCE
RILDVKYHVLLPEDEEVGGSLDYFQWAGILRAVSALTAYHWVYRETIKPWRIADLLILKK
EEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
EMPRSLISCYDNICHFLDQISSAYGHNGAAQRQAHLVMERLSKATTKEIFQMGLHEFITA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVEDNSLLGQTISEQYLFN
HHCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA