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The map label for this gene is rlpA [H]

Identifier: 182679953

GI number: 182679953

Start: 3472182

End: 3472532

Strand: Reverse

Name: rlpA [H]

Synonym: Bind_3048

Alternate gene names: 182679953

Gene position: 3472532-3472182 (Counterclockwise)

Preceding gene: 182679956

Following gene: 182679951

Centisome position: 83.27

GC content: 56.98

Gene sequence:

>351_bases
ATGGTTGGGTCATTCCACATTCCAGATGGAGGCTTATTTTTGAGGAAACTTGTCATTTCTGCGGTATTTCTATTCACGGC
TGCGAATATAGCTTACGCGGAAGGCTTGCACGGGAAAGCGTCTTATTATCATGCGCGTGGGGCTGTCGGCTGCGCGCATC
GCACGTTGCCCTTCGGCACGCATGTGCGCGTCACCAATCTCGCCAATCAACGTGCGACGACGCTCGTGGTCAATGACCGG
GGGCCCTATATCAAGGGGCGCGTGATCGATGTCTCGGTGAATGCTGCCGAGGCGCTCGGTTTCCGACATGCGGGCCTGGC
GCCGGTCAAGGTCGATGTCCTGCCGAATTGA

Upstream 100 bases:

>100_bases
AATATGCTGCAATGCACAAATATAGTGTTGTATGGATTTATAACACAATACATTGCCCTTTTATCATCATAGAGTGCTGT
CAAAAGCCGCCTCCGCCCGA

Downstream 100 bases:

>100_bases
AGCAGTAACTAGTGAGATCACCGAAAACTCTATGGGGGAGCGCGCGGTGCCTGAGAGCCGTAGCCTCCCAAACGTCCGGT
TTCGAGACCGCCTCTTTAGA

Product: rare lipoprotein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MVGSFHIPDGGLFLRKLVISAVFLFTAANIAYAEGLHGKASYYHARGAVGCAHRTLPFGTHVRVTNLANQRATTLVVNDR
GPYIKGRVIDVSVNAAEALGFRHAGLAPVKVDVLPN

Sequences:

>Translated_116_residues
MVGSFHIPDGGLFLRKLVISAVFLFTAANIAYAEGLHGKASYYHARGAVGCAHRTLPFGTHVRVTNLANQRATTLVVNDR
GPYIKGRVIDVSVNAAEALGFRHAGLAPVKVDVLPN
>Mature_116_residues
MVGSFHIPDGGLFLRKLVISAVFLFTAANIAYAEGLHGKASYYHARGAVGCAHRTLPFGTHVRVTNLANQRATTLVVNDR
GPYIKGRVIDVSVNAAEALGFRHAGLAPVKVDVLPN

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rlpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009009
- InterPro:   IPR005728
- InterPro:   IPR022438
- InterPro:   IPR012997 [H]

Pfam domain/function: PF03330 DPBB_1 [H]

EC number: NA

Molecular weight: Translated: 12365; Mature: 12365

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGSFHIPDGGLFLRKLVISAVFLFTAANIAYAEGLHGKASYYHARGAVGCAHRTLPFGT
CCCCEECCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEEECCCCCCCCCCCCCCCC
HVRVTNLANQRATTLVVNDRGPYIKGRVIDVSVNAAEALGFRHAGLAPVKVDVLPN
EEEEEECCCCCEEEEEECCCCCEEEEEEEEEECCHHHHCCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MVGSFHIPDGGLFLRKLVISAVFLFTAANIAYAEGLHGKASYYHARGAVGCAHRTLPFGT
CCCCEECCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEEECCCCCCCCCCCCCCCC
HVRVTNLANQRATTLVVNDRGPYIKGRVIDVSVNAAEALGFRHAGLAPVKVDVLPN
EEEEEECCCCCEEEEEECCCCCEEEEEEEEEECCHHHHCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]