Definition Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome.
Accession NC_010581
Length 4,170,153

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The map label for this gene is yghO [H]

Identifier: 182679916

GI number: 182679916

Start: 3425261

End: 3426391

Strand: Reverse

Name: yghO [H]

Synonym: Bind_3011

Alternate gene names: 182679916

Gene position: 3426391-3425261 (Counterclockwise)

Preceding gene: 182679917

Following gene: 182679914

Centisome position: 82.16

GC content: 57.65

Gene sequence:

>1131_bases
ATGATCGAGATCCTTCCCGTCGACGGGATTTTGCGTTTCCTGGCCTTTTGTCGTCTGCCGCGTCAGCTTTATCGTGGCAA
GCCAGGCTTTGCAGCCTCGCTGGATGCCGAGCGCTGGACCCTCCACGCCAAGAAACTCAACCCGCATTTCAAACTCGTTG
AATCGCAAGCTTGGCTTGCCCGCAAGGACGGGCAATGGGTCGGGCGCATCCAGGCGCAGGTCTATCATGAGGATTATGCA
CCGCGCGAGGCTTCGCGCGGGCAATTCGGCAGCCTCGATGCGATCGACGATCAAGCCGTGGTCGATGCTCTTCTGGAAAC
AGCGGAAAACTGGGTGAGACAACGGGGCCAGCAGGTGATGCATGGCCCCTTCTCGCCGTCCATCAATGGCGAATTGGGCT
TGCTGATCGAGGGATTCCAGGCGACCCCCATGGTGTTGATGCCCTGGCACCCTCCTTATCTGCAAGCCTTGGTTGAGGCC
CGTGGTTATCACAAGGCCCGTGATTTGATCTCCTACCGCTATGCGATCAGTGATGCGGAAAAGATCGACCGGCCAAGCGT
CGCCGAGCGTCCCGAATGGCGAGACCGACTGCGCATCCGCGCTATTGATTTCAAAAATCTCGATGCTGAGGTCACGACCC
TCGTCGATATTTTCAATGACGCCTGGGCCGAGAATTGGGGCTTCGTGCCGATGACCCATGCCGAATTGATGTCGAGCGCG
GAAGCTCTGAAATATGTGACACCGGCCGAGGGGAGTTTCATCATCGAGCTTGATGGTGAGCCGCAGGCCTTTGGCGTGAT
CCTGCTCAATCTCTTCGAACTGACCGAAGGATTCGACGGTCGCTTGCTGCCATTCAATTTTGCCCGGCTCGCCTGGCGCT
TGCGGAAACATGTCTATAAAACCGGCCGCCTCGCTTTGCTCGGCGTGCGGCGTGGTTTGCATCGGAAGACGGCGGGTGGC
GCTGTCCTTTTCGCCTTTATCGAAGAAGCCAGAAGACGCAGCCGCAAACATGCGCTCGAACAGATCGAATTTGGCTGGGT
GCTCGAGGATAATATGGCGATCCGCCGGCCGATCGAATGGGCTGGTTCCAAGATCGATAAGGTGCACCGCGTCTATGAGA
AGGCGCTTTAA

Upstream 100 bases:

>100_bases
CAGCGCCGCTGGCTAAAACCATCAGATCGGCGATGGGTGTCTTGTTCGCAACCGAGTTTGCGCGCCATAACGTTCTCGCC
ATCCGCCGAAAGATGTGGGT

Downstream 100 bases:

>100_bases
AACCTGTGTACGCTCAGGTGGCTCTTCCTTGGCCTATAGGCCTATGCCGATGCGCAATCGTGACAAAGCCCGGCGATCTC
CATGATCCGCGTTCGTGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MIEILPVDGILRFLAFCRLPRQLYRGKPGFAASLDAERWTLHAKKLNPHFKLVESQAWLARKDGQWVGRIQAQVYHEDYA
PREASRGQFGSLDAIDDQAVVDALLETAENWVRQRGQQVMHGPFSPSINGELGLLIEGFQATPMVLMPWHPPYLQALVEA
RGYHKARDLISYRYAISDAEKIDRPSVAERPEWRDRLRIRAIDFKNLDAEVTTLVDIFNDAWAENWGFVPMTHAELMSSA
EALKYVTPAEGSFIIELDGEPQAFGVILLNLFELTEGFDGRLLPFNFARLAWRLRKHVYKTGRLALLGVRRGLHRKTAGG
AVLFAFIEEARRRSRKHALEQIEFGWVLEDNMAIRRPIEWAGSKIDKVHRVYEKAL

Sequences:

>Translated_376_residues
MIEILPVDGILRFLAFCRLPRQLYRGKPGFAASLDAERWTLHAKKLNPHFKLVESQAWLARKDGQWVGRIQAQVYHEDYA
PREASRGQFGSLDAIDDQAVVDALLETAENWVRQRGQQVMHGPFSPSINGELGLLIEGFQATPMVLMPWHPPYLQALVEA
RGYHKARDLISYRYAISDAEKIDRPSVAERPEWRDRLRIRAIDFKNLDAEVTTLVDIFNDAWAENWGFVPMTHAELMSSA
EALKYVTPAEGSFIIELDGEPQAFGVILLNLFELTEGFDGRLLPFNFARLAWRLRKHVYKTGRLALLGVRRGLHRKTAGG
AVLFAFIEEARRRSRKHALEQIEFGWVLEDNMAIRRPIEWAGSKIDKVHRVYEKAL
>Mature_376_residues
MIEILPVDGILRFLAFCRLPRQLYRGKPGFAASLDAERWTLHAKKLNPHFKLVESQAWLARKDGQWVGRIQAQVYHEDYA
PREASRGQFGSLDAIDDQAVVDALLETAENWVRQRGQQVMHGPFSPSINGELGLLIEGFQATPMVLMPWHPPYLQALVEA
RGYHKARDLISYRYAISDAEKIDRPSVAERPEWRDRLRIRAIDFKNLDAEVTTLVDIFNDAWAENWGFVPMTHAELMSSA
EALKYVTPAEGSFIIELDGEPQAFGVILLNLFELTEGFDGRLLPFNFARLAWRLRKHVYKTGRLALLGVRRGLHRKTAGG
AVLFAFIEEARRRSRKHALEQIEFGWVLEDNMAIRRPIEWAGSKIDKVHRVYEKAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016181 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43095; Mature: 43095

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEILPVDGILRFLAFCRLPRQLYRGKPGFAASLDAERWTLHAKKLNPHFKLVESQAWLA
CEEEECHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHEEEHHHCCCCCEEECCHHHHH
RKDGQWVGRIQAQVYHEDYAPREASRGQFGSLDAIDDQAVVDALLETAENWVRQRGQQVM
HCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHH
HGPFSPSINGELGLLIEGFQATPMVLMPWHPPYLQALVEARGYHKARDLISYRYAISDAE
CCCCCCCCCCCEEEEEECCCCCCEEEECCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCHH
KIDRPSVAERPEWRDRLRIRAIDFKNLDAEVTTLVDIFNDAWAENWGFVPMTHAELMSSA
HCCCCCCCCCCCHHHCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHH
EALKYVTPAEGSFIIELDGEPQAFGVILLNLFELTEGFDGRLLPFNFARLAWRLRKHVYK
HHHHEECCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
TGRLALLGVRRGLHRKTAGGAVLFAFIEEARRRSRKHALEQIEFGWVLEDNMAIRRPIEW
CCCEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHCCHHH
AGSKIDKVHRVYEKAL
HCHHHHHHHHHHHHCC
>Mature Secondary Structure
MIEILPVDGILRFLAFCRLPRQLYRGKPGFAASLDAERWTLHAKKLNPHFKLVESQAWLA
CEEEECHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHEEEHHHCCCCCEEECCHHHHH
RKDGQWVGRIQAQVYHEDYAPREASRGQFGSLDAIDDQAVVDALLETAENWVRQRGQQVM
HCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHH
HGPFSPSINGELGLLIEGFQATPMVLMPWHPPYLQALVEARGYHKARDLISYRYAISDAE
CCCCCCCCCCCEEEEEECCCCCCEEEECCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCHH
KIDRPSVAERPEWRDRLRIRAIDFKNLDAEVTTLVDIFNDAWAENWGFVPMTHAELMSSA
HCCCCCCCCCCCHHHCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHH
EALKYVTPAEGSFIIELDGEPQAFGVILLNLFELTEGFDGRLLPFNFARLAWRLRKHVYK
HHHHEECCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
TGRLALLGVRRGLHRKTAGGAVLFAFIEEARRRSRKHALEQIEFGWVLEDNMAIRRPIEW
CCCEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHCCHHH
AGSKIDKVHRVYEKAL
HCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]