BacMap

Definition	Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome.
Accession	NC_010581
Length	4,170,153

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The map label for this gene is bdhA [H]

Identifier: 182679914

GI number: 182679914

Start: 3423779

End: 3424564

Strand: Reverse

Name: bdhA [H]

Synonym: Bind_3009

Alternate gene names: 182679914

Gene position: 3424564-3423779 (Counterclockwise)

Preceding gene: 182679916

Following gene: 182679913

Centisome position: 82.12

GC content: 58.27

Gene sequence:

>786_bases
ATGAGCTTGAAATCACGCAATGCCCTCGTCACCGGCTCGACAAGCGGTATTGGTCTTGCGATCGCCCGGACATTTGCGCG
GGAAGGCGCCAATGTGACGATCAATGGCTTCGGTGATGCGGCGGCCATCGAAACCGAACGCGCTGCGATCGAGAAGGAAT
TCGGCGTCAAGGCCTTCTATTCGGATGCCGACATGACCAAGCCCGAGGCGATCCGCGCCATGGTCAAGGAAGCTAAGGAG
AGACTGGGCTCTCTCGATATTCTTGTGAACAATGCCGGGATCCAGCACGTCTCGCCCATCGAGGATTTTCCGCTCGAGAA
ATGGGATCAGATCATAGCGATCAATCTTTCCGCGGCGTTTCATGGAATTGCTGCCGCCATTCCCGGCATGAAGGCGCGCC
ATTGGGGCCGCATTATCTCGACCGCTTCGGCCCATTCCCTGGTCGCCTCGCCGTTCAAATCCGCCTATGTCTCGGCTAAG
CATGGCATTGTGGGGCTGACCCAAACAGCGGCGCTCGAACTCGCGACCTCGGGCATCACGGTCAATTGCATTTCGCCGGG
CTATGTCTGGACACCGCTCGTCGAGAAGCAGATCCCCGACACGATGAAAGCCCGCAATCTCAGCCGTGACGAAGTCATCA
ATAACGTCATTCTAGCGGCACAGCCGACCAAACAATTCGTGACGGCCGACCAGGTTGCGTCCCTCGCCCTTTATCTTTGT
TCGGATGCGGCGGCGCAGATCACGGGCTCCAATCTGGTGATCGATGGCGGGTGGACAGCGGCTTGA

Upstream 100 bases:

>100_bases
GGCTTTTTCATTCTAACTGAAAGAATAGAACTGAGAGTAGTGGAGTCACGATAATAAGGCCTGAGTGTGAAGATCATTCG
GCTTAAAATGGGGGGAATGA

Downstream 100 bases:

>100_bases
TGTCAGACAGGTTTGAAGGCTGCGGAGTCCGTATGTTGGAGCAGGATCATGGGATTATGACAGAGGGGCGAAACGCCAAG
AGTGTCCTTGTTGATGCCCC

Product: 3-hydroxybutyrate dehydrogenase

Products: NA

Alternate protein names: BDH; 3-hydroxybutyrate dehydrogenase; 3-HBDH [H]

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MSLKSRNALVTGSTSGIGLAIARTFAREGANVTINGFGDAAAIETERAAIEKEFGVKAFYSDADMTKPEAIRAMVKEAKE
RLGSLDILVNNAGIQHVSPIEDFPLEKWDQIIAINLSAAFHGIAAAIPGMKARHWGRIISTASAHSLVASPFKSAYVSAK
HGIVGLTQTAALELATSGITVNCISPGYVWTPLVEKQIPDTMKARNLSRDEVINNVILAAQPTKQFVTADQVASLALYLC
SDAAAQITGSNLVIDGGWTAA

Sequences:

>Translated_261_residues
MSLKSRNALVTGSTSGIGLAIARTFAREGANVTINGFGDAAAIETERAAIEKEFGVKAFYSDADMTKPEAIRAMVKEAKE
RLGSLDILVNNAGIQHVSPIEDFPLEKWDQIIAINLSAAFHGIAAAIPGMKARHWGRIISTASAHSLVASPFKSAYVSAK
HGIVGLTQTAALELATSGITVNCISPGYVWTPLVEKQIPDTMKARNLSRDEVINNVILAAQPTKQFVTADQVASLALYLC
SDAAAQITGSNLVIDGGWTAA
>Mature_260_residues
SLKSRNALVTGSTSGIGLAIARTFAREGANVTINGFGDAAAIETERAAIEKEFGVKAFYSDADMTKPEAIRAMVKEAKER
LGSLDILVNNAGIQHVSPIEDFPLEKWDQIIAINLSAAFHGIAAAIPGMKARHWGRIISTASAHSLVASPFKSAYVSAKH
GIVGLTQTAALELATSGITVNCISPGYVWTPLVEKQIPDTMKARNLSRDEVINNVILAAQPTKQFVTADQVASLALYLCS
DAAAQITGSNLVIDGGWTAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI66933014, Length=236, Percent_Identity=33.0508474576271, Blast_Score=117, Evalue=9e-27,
Organism=Homo sapiens, GI32483357, Length=265, Percent_Identity=30.9433962264151, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI31542939, Length=201, Percent_Identity=31.3432835820896, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI15277342, Length=263, Percent_Identity=30.0380228136882, Blast_Score=98, Evalue=8e-21,
Organism=Homo sapiens, GI20149619, Length=250, Percent_Identity=32, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI19923817, Length=270, Percent_Identity=27.7777777777778, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI5031737, Length=259, Percent_Identity=29.7297297297297, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI4504505, Length=262, Percent_Identity=28.6259541984733, Blast_Score=91, Evalue=8e-19,
Organism=Homo sapiens, GI59889578, Length=237, Percent_Identity=29.1139240506329, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI142976729, Length=212, Percent_Identity=30.6603773584906, Blast_Score=89, Evalue=4e-18,
Organism=Homo sapiens, GI33667109, Length=194, Percent_Identity=35.0515463917526, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI4758504, Length=209, Percent_Identity=31.1004784688995, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI126723191, Length=183, Percent_Identity=32.7868852459016, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI7705925, Length=266, Percent_Identity=27.8195488721804, Blast_Score=82, Evalue=7e-16,
Organism=Homo sapiens, GI7657478, Length=193, Percent_Identity=27.979274611399, Blast_Score=81, Evalue=7e-16,
Organism=Homo sapiens, GI224922801, Length=175, Percent_Identity=29.7142857142857, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI40254992, Length=249, Percent_Identity=26.9076305220884, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI10190704, Length=255, Percent_Identity=25.4901960784314, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI126723750, Length=260, Percent_Identity=27.3076923076923, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI7706318, Length=194, Percent_Identity=27.8350515463918, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI210032110, Length=235, Percent_Identity=26.3829787234043, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI4503817, Length=196, Percent_Identity=27.0408163265306, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI223718074, Length=196, Percent_Identity=28.0612244897959, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI4503301, Length=209, Percent_Identity=26.7942583732057, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI83715985, Length=194, Percent_Identity=29.3814432989691, Blast_Score=68, Evalue=7e-12,
Organism=Escherichia coli, GI87082100, Length=259, Percent_Identity=38.2239382239382, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI1787335, Length=258, Percent_Identity=33.7209302325581, Blast_Score=133, Evalue=1e-32,
Organism=Escherichia coli, GI87082160, Length=260, Percent_Identity=33.8461538461538, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1788459, Length=257, Percent_Identity=33.852140077821, Blast_Score=124, Evalue=8e-30,
Organism=Escherichia coli, GI1790717, Length=265, Percent_Identity=31.3207547169811, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1789378, Length=266, Percent_Identity=32.7067669172932, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI1789208, Length=267, Percent_Identity=29.2134831460674, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI2367175, Length=255, Percent_Identity=30.9803921568627, Blast_Score=95, Evalue=6e-21,
Organism=Escherichia coli, GI1789057, Length=259, Percent_Identity=29.7297297297297, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1787905, Length=258, Percent_Identity=28.6821705426357, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI1786812, Length=262, Percent_Identity=29.0076335877863, Blast_Score=88, Evalue=7e-19,
Organism=Escherichia coli, GI2367365, Length=262, Percent_Identity=28.6259541984733, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1786701, Length=187, Percent_Identity=28.3422459893048, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1787820, Length=182, Percent_Identity=27.4725274725275, Blast_Score=66, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI25147288, Length=259, Percent_Identity=30.5019305019305, Blast_Score=110, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI17555706, Length=259, Percent_Identity=28.957528957529, Blast_Score=101, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17560676, Length=261, Percent_Identity=29.1187739463602, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17564282, Length=193, Percent_Identity=30.5699481865285, Blast_Score=91, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI17561402, Length=276, Percent_Identity=28.9855072463768, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17538486, Length=268, Percent_Identity=29.8507462686567, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI71994604, Length=258, Percent_Identity=26.7441860465116, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI71994600, Length=261, Percent_Identity=26.0536398467433, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17538182, Length=215, Percent_Identity=33.0232558139535, Blast_Score=85, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17562910, Length=273, Percent_Identity=28.9377289377289, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17538480, Length=269, Percent_Identity=28.6245353159851, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17551412, Length=257, Percent_Identity=27.2373540856031, Blast_Score=80, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI17559104, Length=263, Percent_Identity=32.319391634981, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17560150, Length=273, Percent_Identity=27.4725274725275, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17562904, Length=272, Percent_Identity=28.6764705882353, Blast_Score=77, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI193204405, Length=196, Percent_Identity=34.1836734693878, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17568967, Length=265, Percent_Identity=27.1698113207547, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17562908, Length=268, Percent_Identity=30.2238805970149, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17560332, Length=196, Percent_Identity=32.1428571428571, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI193203115, Length=195, Percent_Identity=27.1794871794872, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI72000259, Length=272, Percent_Identity=27.2058823529412, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI193203117, Length=197, Percent_Identity=26.9035532994924, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI115534694, Length=257, Percent_Identity=24.9027237354086, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17562990, Length=269, Percent_Identity=28.2527881040892, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17508895, Length=197, Percent_Identity=26.3959390862944, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17562906, Length=268, Percent_Identity=29.8507462686567, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17560220, Length=264, Percent_Identity=28.030303030303, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17544670, Length=271, Percent_Identity=26.1992619926199, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71982365, Length=204, Percent_Identity=27.4509803921569, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17563726, Length=271, Percent_Identity=26.9372693726937, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17531453, Length=269, Percent_Identity=28.996282527881, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17555612, Length=254, Percent_Identity=29.9212598425197, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI32563809, Length=268, Percent_Identity=27.2388059701493, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17507613, Length=268, Percent_Identity=27.2388059701493, Blast_Score=68, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17567345, Length=259, Percent_Identity=22.7799227799228, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17565030, Length=266, Percent_Identity=27.8195488721804, Blast_Score=66, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=252, Percent_Identity=28.1746031746032, Blast_Score=86, Evalue=5e-18,
Organism=Saccharomyces cerevisiae, GI6322227, Length=211, Percent_Identity=25.5924170616114, Blast_Score=72, Evalue=6e-14,
Organism=Saccharomyces cerevisiae, GI6324126, Length=197, Percent_Identity=25.8883248730964, Blast_Score=72, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6323882, Length=256, Percent_Identity=26.171875, Blast_Score=70, Evalue=3e-13,
Organism=Drosophila melanogaster, GI21355319, Length=263, Percent_Identity=30.0380228136882, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24644339, Length=260, Percent_Identity=30.3846153846154, Blast_Score=106, Evalue=2e-23,
Organism=Drosophila melanogaster, GI23397609, Length=263, Percent_Identity=30.7984790874525, Blast_Score=100, Evalue=7e-22,
Organism=Drosophila melanogaster, GI28571526, Length=260, Percent_Identity=30, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24639444, Length=260, Percent_Identity=28.0769230769231, Blast_Score=91, Evalue=8e-19,
Organism=Drosophila melanogaster, GI21357041, Length=259, Percent_Identity=28.1853281853282, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI18859837, Length=212, Percent_Identity=31.1320754716981, Blast_Score=88, Evalue=7e-18,
Organism=Drosophila melanogaster, GI17737361, Length=204, Percent_Identity=29.9019607843137, Blast_Score=85, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24643142, Length=260, Percent_Identity=27.6923076923077, Blast_Score=78, Evalue=7e-15,
Organism=Drosophila melanogaster, GI24640442, Length=189, Percent_Identity=29.6296296296296, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21358495, Length=256, Percent_Identity=26.171875, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21355631, Length=170, Percent_Identity=27.6470588235294, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21357673, Length=265, Percent_Identity=27.1698113207547, Blast_Score=71, Evalue=9e-13,
Organism=Drosophila melanogaster, GI28574402, Length=191, Percent_Identity=28.2722513089005, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24584744, Length=191, Percent_Identity=28.2722513089005, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24644337, Length=197, Percent_Identity=26.9035532994924, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI281364892, Length=167, Percent_Identity=28.1437125748503, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI28571387, Length=248, Percent_Identity=26.6129032258064, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI21356301, Length=202, Percent_Identity=24.2574257425743, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24584748, Length=189, Percent_Identity=29.6296296296296, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI161076933, Length=189, Percent_Identity=29.6296296296296, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011294
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.30 [H]

Molecular weight: Translated: 27549; Mature: 27418

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKSRNALVTGSTSGIGLAIARTFAREGANVTINGFGDAAAIETERAAIEKEFGVKAFY
CCCCCCCEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEE
SDADMTKPEAIRAMVKEAKERLGSLDILVNNAGIQHVSPIEDFPLEKWDQIIAINLSAAF
CCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHCCEEEEEEEHHHH
HGIAAAIPGMKARHWGRIISTASAHSLVASPFKSAYVSAKHGIVGLTQTAALELATSGIT
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHEEEECCEE
VNCISPGYVWTPLVEKQIPDTMKARNLSRDEVINNVILAAQPTKQFVTADQVASLALYLC
EEEECCCCEECCHHHHHCCHHHHHCCCCHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHH
SDAAAQITGSNLVIDGGWTAA
CCHHHEECCCEEEEECCCCCC
>Mature Secondary Structure 
SLKSRNALVTGSTSGIGLAIARTFAREGANVTINGFGDAAAIETERAAIEKEFGVKAFY
CCCCCCEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEE
SDADMTKPEAIRAMVKEAKERLGSLDILVNNAGIQHVSPIEDFPLEKWDQIIAINLSAAF
CCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHCCEEEEEEEHHHH
HGIAAAIPGMKARHWGRIISTASAHSLVASPFKSAYVSAKHGIVGLTQTAALELATSGIT
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHEEEECCEE
VNCISPGYVWTPLVEKQIPDTMKARNLSRDEVINNVILAAQPTKQFVTADQVASLALYLC
EEEECCCCEECCHHHHHCCHHHHHCCCCHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHH
SDAAAQITGSNLVIDGGWTAA
CCHHHEECCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9922248; 11481431 [H]