| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is yghO [H]
Identifier: 182679916
GI number: 182679916
Start: 3425261
End: 3426391
Strand: Reverse
Name: yghO [H]
Synonym: Bind_3011
Alternate gene names: 182679916
Gene position: 3426391-3425261 (Counterclockwise)
Preceding gene: 182679917
Following gene: 182679914
Centisome position: 82.16
GC content: 57.65
Gene sequence:
>1131_bases ATGATCGAGATCCTTCCCGTCGACGGGATTTTGCGTTTCCTGGCCTTTTGTCGTCTGCCGCGTCAGCTTTATCGTGGCAA GCCAGGCTTTGCAGCCTCGCTGGATGCCGAGCGCTGGACCCTCCACGCCAAGAAACTCAACCCGCATTTCAAACTCGTTG AATCGCAAGCTTGGCTTGCCCGCAAGGACGGGCAATGGGTCGGGCGCATCCAGGCGCAGGTCTATCATGAGGATTATGCA CCGCGCGAGGCTTCGCGCGGGCAATTCGGCAGCCTCGATGCGATCGACGATCAAGCCGTGGTCGATGCTCTTCTGGAAAC AGCGGAAAACTGGGTGAGACAACGGGGCCAGCAGGTGATGCATGGCCCCTTCTCGCCGTCCATCAATGGCGAATTGGGCT TGCTGATCGAGGGATTCCAGGCGACCCCCATGGTGTTGATGCCCTGGCACCCTCCTTATCTGCAAGCCTTGGTTGAGGCC CGTGGTTATCACAAGGCCCGTGATTTGATCTCCTACCGCTATGCGATCAGTGATGCGGAAAAGATCGACCGGCCAAGCGT CGCCGAGCGTCCCGAATGGCGAGACCGACTGCGCATCCGCGCTATTGATTTCAAAAATCTCGATGCTGAGGTCACGACCC TCGTCGATATTTTCAATGACGCCTGGGCCGAGAATTGGGGCTTCGTGCCGATGACCCATGCCGAATTGATGTCGAGCGCG GAAGCTCTGAAATATGTGACACCGGCCGAGGGGAGTTTCATCATCGAGCTTGATGGTGAGCCGCAGGCCTTTGGCGTGAT CCTGCTCAATCTCTTCGAACTGACCGAAGGATTCGACGGTCGCTTGCTGCCATTCAATTTTGCCCGGCTCGCCTGGCGCT TGCGGAAACATGTCTATAAAACCGGCCGCCTCGCTTTGCTCGGCGTGCGGCGTGGTTTGCATCGGAAGACGGCGGGTGGC GCTGTCCTTTTCGCCTTTATCGAAGAAGCCAGAAGACGCAGCCGCAAACATGCGCTCGAACAGATCGAATTTGGCTGGGT GCTCGAGGATAATATGGCGATCCGCCGGCCGATCGAATGGGCTGGTTCCAAGATCGATAAGGTGCACCGCGTCTATGAGA AGGCGCTTTAA
Upstream 100 bases:
>100_bases CAGCGCCGCTGGCTAAAACCATCAGATCGGCGATGGGTGTCTTGTTCGCAACCGAGTTTGCGCGCCATAACGTTCTCGCC ATCCGCCGAAAGATGTGGGT
Downstream 100 bases:
>100_bases AACCTGTGTACGCTCAGGTGGCTCTTCCTTGGCCTATAGGCCTATGCCGATGCGCAATCGTGACAAAGCCCGGCGATCTC CATGATCCGCGTTCGTGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MIEILPVDGILRFLAFCRLPRQLYRGKPGFAASLDAERWTLHAKKLNPHFKLVESQAWLARKDGQWVGRIQAQVYHEDYA PREASRGQFGSLDAIDDQAVVDALLETAENWVRQRGQQVMHGPFSPSINGELGLLIEGFQATPMVLMPWHPPYLQALVEA RGYHKARDLISYRYAISDAEKIDRPSVAERPEWRDRLRIRAIDFKNLDAEVTTLVDIFNDAWAENWGFVPMTHAELMSSA EALKYVTPAEGSFIIELDGEPQAFGVILLNLFELTEGFDGRLLPFNFARLAWRLRKHVYKTGRLALLGVRRGLHRKTAGG AVLFAFIEEARRRSRKHALEQIEFGWVLEDNMAIRRPIEWAGSKIDKVHRVYEKAL
Sequences:
>Translated_376_residues MIEILPVDGILRFLAFCRLPRQLYRGKPGFAASLDAERWTLHAKKLNPHFKLVESQAWLARKDGQWVGRIQAQVYHEDYA PREASRGQFGSLDAIDDQAVVDALLETAENWVRQRGQQVMHGPFSPSINGELGLLIEGFQATPMVLMPWHPPYLQALVEA RGYHKARDLISYRYAISDAEKIDRPSVAERPEWRDRLRIRAIDFKNLDAEVTTLVDIFNDAWAENWGFVPMTHAELMSSA EALKYVTPAEGSFIIELDGEPQAFGVILLNLFELTEGFDGRLLPFNFARLAWRLRKHVYKTGRLALLGVRRGLHRKTAGG AVLFAFIEEARRRSRKHALEQIEFGWVLEDNMAIRRPIEWAGSKIDKVHRVYEKAL >Mature_376_residues MIEILPVDGILRFLAFCRLPRQLYRGKPGFAASLDAERWTLHAKKLNPHFKLVESQAWLARKDGQWVGRIQAQVYHEDYA PREASRGQFGSLDAIDDQAVVDALLETAENWVRQRGQQVMHGPFSPSINGELGLLIEGFQATPMVLMPWHPPYLQALVEA RGYHKARDLISYRYAISDAEKIDRPSVAERPEWRDRLRIRAIDFKNLDAEVTTLVDIFNDAWAENWGFVPMTHAELMSSA EALKYVTPAEGSFIIELDGEPQAFGVILLNLFELTEGFDGRLLPFNFARLAWRLRKHVYKTGRLALLGVRRGLHRKTAGG AVLFAFIEEARRRSRKHALEQIEFGWVLEDNMAIRRPIEWAGSKIDKVHRVYEKAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43095; Mature: 43095
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEILPVDGILRFLAFCRLPRQLYRGKPGFAASLDAERWTLHAKKLNPHFKLVESQAWLA CEEEECHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHEEEHHHCCCCCEEECCHHHHH RKDGQWVGRIQAQVYHEDYAPREASRGQFGSLDAIDDQAVVDALLETAENWVRQRGQQVM HCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHH HGPFSPSINGELGLLIEGFQATPMVLMPWHPPYLQALVEARGYHKARDLISYRYAISDAE CCCCCCCCCCCEEEEEECCCCCCEEEECCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCHH KIDRPSVAERPEWRDRLRIRAIDFKNLDAEVTTLVDIFNDAWAENWGFVPMTHAELMSSA HCCCCCCCCCCCHHHCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHH EALKYVTPAEGSFIIELDGEPQAFGVILLNLFELTEGFDGRLLPFNFARLAWRLRKHVYK HHHHEECCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH TGRLALLGVRRGLHRKTAGGAVLFAFIEEARRRSRKHALEQIEFGWVLEDNMAIRRPIEW CCCEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHCCHHH AGSKIDKVHRVYEKAL HCHHHHHHHHHHHHCC >Mature Secondary Structure MIEILPVDGILRFLAFCRLPRQLYRGKPGFAASLDAERWTLHAKKLNPHFKLVESQAWLA CEEEECHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHEEEHHHCCCCCEEECCHHHHH RKDGQWVGRIQAQVYHEDYAPREASRGQFGSLDAIDDQAVVDALLETAENWVRQRGQQVM HCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHH HGPFSPSINGELGLLIEGFQATPMVLMPWHPPYLQALVEARGYHKARDLISYRYAISDAE CCCCCCCCCCCEEEEEECCCCCCEEEECCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCHH KIDRPSVAERPEWRDRLRIRAIDFKNLDAEVTTLVDIFNDAWAENWGFVPMTHAELMSSA HCCCCCCCCCCCHHHCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHH EALKYVTPAEGSFIIELDGEPQAFGVILLNLFELTEGFDGRLLPFNFARLAWRLRKHVYK HHHHEECCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH TGRLALLGVRRGLHRKTAGGAVLFAFIEEARRRSRKHALEQIEFGWVLEDNMAIRRPIEW CCCEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHCCHHH AGSKIDKVHRVYEKAL HCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]