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The map label for this gene is yciF [H]

Identifier: 182679892

GI number: 182679892

Start: 3392392

End: 3392886

Strand: Reverse

Name: yciF [H]

Synonym: Bind_2984

Alternate gene names: 182679892

Gene position: 3392886-3392392 (Counterclockwise)

Preceding gene: 182679894

Following gene: 182679889

Centisome position: 81.36

GC content: 49.9

Gene sequence:

>495_bases
ATGGTCCATTCTGGAGGAAATTTGCGGGATCTCTTCCATAGGGAATTGAAAGATATTTATTTCGCGGAAAAACAGATTTT
ACGCGCTCTGCCAAAGATGGCACGCAACGCACAATCGAGTGAGCTTCAGCATGCTTTTGAAACTCACGCCGATGAAACGG
AACAGCAAATAGAACGCCTTGATCGCGTCTTTGAAAGCATCGGTCAATTGCCGCGCGGCAAAACCTGTGACGCCATCATC
GGCCTCCTTGATGAAGGCAAGGAGATCATGGAAGAGTTTGCGGACACCGAAGCGCTCGATCCCGGTCTTCTCGCTGCGGC
ACAAAGTGTCGAGCATTACGAGATCAGTCGCTATGGAACATTAAAGGCATGGGCAGAGCAGTTAGGGCTCACCGAAGCAG
CACAGCTCCTTGACGCGACACTTGTTGAGGAAAAGAGAATGGATGAGATCCTCACCAAAATTGCGATGGTTAGTCTCAAT
GAGCAGGCAGCTTGA

Upstream 100 bases:

>100_bases
AGAAGAGACCGGCTTGACAGAAGGAACGAGAGCTTGTTCCGCTCGTTTAACGAAGACCGATAAGATAGCTTTTCTGGATG
ATAAACGGGAGGATATGACA

Downstream 100 bases:

>100_bases
TATTTGCTGAAGAGATGACTACGGAGTGATGATCCTAACACCAATCTTGCTCGGCTTGCATTTGTAGGCACGGTTTCAGA
GCGCCATTACTGGAATAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MVHSGGNLRDLFHRELKDIYFAEKQILRALPKMARNAQSSELQHAFETHADETEQQIERLDRVFESIGQLPRGKTCDAII
GLLDEGKEIMEEFADTEALDPGLLAAAQSVEHYEISRYGTLKAWAEQLGLTEAAQLLDATLVEEKRMDEILTKIAMVSLN
EQAA

Sequences:

>Translated_164_residues
MVHSGGNLRDLFHRELKDIYFAEKQILRALPKMARNAQSSELQHAFETHADETEQQIERLDRVFESIGQLPRGKTCDAII
GLLDEGKEIMEEFADTEALDPGLLAAAQSVEHYEISRYGTLKAWAEQLGLTEAAQLLDATLVEEKRMDEILTKIAMVSLN
EQAA
>Mature_164_residues
MVHSGGNLRDLFHRELKDIYFAEKQILRALPKMARNAQSSELQHAFETHADETEQQIERLDRVFESIGQLPRGKTCDAII
GLLDEGKEIMEEFADTEALDPGLLAAAQSVEHYEISRYGTLKAWAEQLGLTEAAQLLDATLVEEKRMDEILTKIAMVSLN
EQAA

Specific function: Unknown

COG id: COG3685

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787512, Length=157, Percent_Identity=47.1337579617834, Blast_Score=131, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010287
- InterPro:   IPR012347
- InterPro:   IPR009078 [H]

Pfam domain/function: PF05974 DUF892 [H]

EC number: NA

Molecular weight: Translated: 18440; Mature: 18440

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVHSGGNLRDLFHRELKDIYFAEKQILRALPKMARNAQSSELQHAFETHADETEQQIERL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHH
DRVFESIGQLPRGKTCDAIIGLLDEGKEIMEEFADTEALDPGLLAAAQSVEHYEISRYGT
HHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LKAWAEQLGLTEAAQLLDATLVEEKRMDEILTKIAMVSLNEQAA
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVHSGGNLRDLFHRELKDIYFAEKQILRALPKMARNAQSSELQHAFETHADETEQQIERL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHH
DRVFESIGQLPRGKTCDAIIGLLDEGKEIMEEFADTEALDPGLLAAAQSVEHYEISRYGT
HHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LKAWAEQLGLTEAAQLLDATLVEEKRMDEILTKIAMVSLNEQAA
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3058546; 9097039; 9278503; 8455549 [H]