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The map label for this gene is 182679889

Identifier: 182679889

GI number: 182679889

Start: 3389257

End: 3389799

Strand: Reverse

Name: 182679889

Synonym: Bind_2981

Alternate gene names: NA

Gene position: 3389799-3389257 (Counterclockwise)

Preceding gene: 182679892

Following gene: 182679887

Centisome position: 81.29

GC content: 59.85

Gene sequence:

>543_bases
ATGGAGCGTCTTGATCGACAGGTTTGGATAAAGGCTGGGCTCGCCGCGCTCGCAGAGAATGGCCTGGCGGCCGTTCGCGT
CGAACTGCTCGCCAAGCAGTTGAAGATTACCAAAGGTAGCTTCTACTGGCATTTCGCTGACCGCCGGGAGCTGCTCTCGG
CGATGATCGAGACATGGGAGAATAACCAGACGACTGAGATCATCGCGCTGGTCGAGGCGGAAGGCGGACCATCCCACGAG
CGCTTGGAACACCTTTCCATCGCACTAACGCAACTCGACATGCAGCTCGAAGTGGCCATGCGAGGCTGGGCTGCCACCGA
CTCAGATGTCCGCCGTGTACTCCAGCGGATTGATCTTGCGCGTTGCGCCTATCTTCGGTCGATCATCGAAAGCGCTGGGG
TGCCCTCCGACGCCGCGCAGGCCCGCGCTCGGCTCGTCTATTATGCGCTGATCGGGGAACTGATGAGCGGATCGGAAGAT
TGGCTGCAAACCCATCTGGAGAGCATGGCCTTGAATCGGCCCATGATCCTGCGTTGGCCATAG

Upstream 100 bases:

>100_bases
CGAGGAGTAGATGCCAATCCATGACAACACCATACGGTAAAGTATGGTTCATATAATCTCAAAAGCTTGCCGCAATCAAT
ACGGTATCGTATGGTTTGCC

Downstream 100 bases:

>100_bases
CACTCGTTGCAATGTTACCCGTCATCTGCCTCCCAGGCGAGCTTTCGTCATCCCCACGTTTCAGCCATTCGCGCAACGCC
ATAGGCGACATGATAGAGGG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulatory Protein; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Protein TetR Family; Transcriptional Regulator Protein; TetR-Type Regulator; TetR Family Regulatory Protein

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MERLDRQVWIKAGLAALAENGLAAVRVELLAKQLKITKGSFYWHFADRRELLSAMIETWENNQTTEIIALVEAEGGPSHE
RLEHLSIALTQLDMQLEVAMRGWAATDSDVRRVLQRIDLARCAYLRSIIESAGVPSDAAQARARLVYYALIGELMSGSED
WLQTHLESMALNRPMILRWP

Sequences:

>Translated_180_residues
MERLDRQVWIKAGLAALAENGLAAVRVELLAKQLKITKGSFYWHFADRRELLSAMIETWENNQTTEIIALVEAEGGPSHE
RLEHLSIALTQLDMQLEVAMRGWAATDSDVRRVLQRIDLARCAYLRSIIESAGVPSDAAQARARLVYYALIGELMSGSED
WLQTHLESMALNRPMILRWP
>Mature_180_residues
MERLDRQVWIKAGLAALAENGLAAVRVELLAKQLKITKGSFYWHFADRRELLSAMIETWENNQTTEIIALVEAEGGPSHE
RLEHLSIALTQLDMQLEVAMRGWAATDSDVRRVLQRIDLARCAYLRSIIESAGVPSDAAQARARLVYYALIGELMSGSED
WLQTHLESMALNRPMILRWP

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20372; Mature: 20372

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERLDRQVWIKAGLAALAENGLAAVRVELLAKQLKITKGSFYWHFADRRELLSAMIETWE
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHC
NNQTTEIIALVEAEGGPSHERLEHLSIALTQLDMQLEVAMRGWAATDSDVRRVLQRIDLA
CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
RCAYLRSIIESAGVPSDAAQARARLVYYALIGELMSGSEDWLQTHLESMALNRPMILRWP
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECC
>Mature Secondary Structure
MERLDRQVWIKAGLAALAENGLAAVRVELLAKQLKITKGSFYWHFADRRELLSAMIETWE
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHC
NNQTTEIIALVEAEGGPSHERLEHLSIALTQLDMQLEVAMRGWAATDSDVRRVLQRIDLA
CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
RCAYLRSIIESAGVPSDAAQARARLVYYALIGELMSGSEDWLQTHLESMALNRPMILRWP
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA