Definition Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome.
Accession NC_010581
Length 4,170,153

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The map label for this gene is yqeB [C]

Identifier: 182679814

GI number: 182679814

Start: 3308638

End: 3308955

Strand: Reverse

Name: yqeB [C]

Synonym: Bind_2903

Alternate gene names: 182679814

Gene position: 3308955-3308638 (Counterclockwise)

Preceding gene: 182679816

Following gene: 182679813

Centisome position: 79.35

GC content: 60.38

Gene sequence:

>318_bases
ATGAGAGACGACGATCTCCTCCTGCTGGCGCAAATGTGGCGGGAAAGCGGGCGCTCCGTCGCCTTGGCGACGGTAGTCGA
AACCTGGGGATCAGCACCTCGGCCGAGCGGCAGTCATCTGGTCATCGACAGCGAAGGCCATTTTGAAGGATCGGTGTCCG
GCGGTTGCGTTGAGGCCGAGATCATTACCGAGGCCATGGATGTTTTGGAGGATGGCCGCGCGCGTCTCCTGGAATTTGGT
GTCGCCGATGAAACGGCGTGGCGCTCTGGCCTCTCTTGTGGCGGCAAGATCCGGGTTTTCGTCGAGAGGATAGATTGA

Upstream 100 bases:

>100_bases
GACGAGTATTCACTGAAATGCGTTCATCCCGAACTTGTGTCCGCCGGCTCTTCGGACAACATGAAGGGAGAGAGGTGCGG
GTTGGTGGACGGAAATGATG

Downstream 100 bases:

>100_bases
TGCGTTTGGCTTTGCTGGCGGAACTGAACGCGGCGCGCCGGGCACGCCGTCCCGTTCTGGTCATTACGGATCTTGGTTCT
GGACATCAAAGATTGATCTA

Product: hypothetical protein

Products: NA

Alternate protein names: XdhC/CoxI Family Protein; Xanthine Dehydrogenase; Carbon Monoxide Dehydrogenase Accessory Protein; XdhC And CoxI Family; Xanthine And CO Dehydrogenase Maturation Factor; Lipoprotein; Xanthine Dehydrogenase Accessory Factor XdhC/CoxI; XdhC/CoxF Family Protein; Xanthine And Co Dehydrogenase Maturation Factor; CoxI Protein; Xanthine Dehydrogenase Accessory Factor XdhC; Xanthine Dehydrogenase Accessory Factor Subfamily; XdhC Homologue; Xanthine Dehydrogenase Accessory Factor Subfamily Putative; Alcohol Dehydrogenase; XdhC Family Protein; Carbon Monoxide Dehydrogenase Accesory Protein; Xanthine/CO Dehydrogenase Maturation Factor; Xanthine/CO Dehydrogenase Maturation Protein

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MRDDDLLLLAQMWRESGRSVALATVVETWGSAPRPSGSHLVIDSEGHFEGSVSGGCVEAEIITEAMDVLEDGRARLLEFG
VADETAWRSGLSCGGKIRVFVERID

Sequences:

>Translated_105_residues
MRDDDLLLLAQMWRESGRSVALATVVETWGSAPRPSGSHLVIDSEGHFEGSVSGGCVEAEIITEAMDVLEDGRARLLEFG
VADETAWRSGLSCGGKIRVFVERID
>Mature_105_residues
MRDDDLLLLAQMWRESGRSVALATVVETWGSAPRPSGSHLVIDSEGHFEGSVSGGCVEAEIITEAMDVLEDGRARLLEFG
VADETAWRSGLSCGGKIRVFVERID

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11378; Mature: 11378

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDDDLLLLAQMWRESGRSVALATVVETWGSAPRPSGSHLVIDSEGHFEGSVSGGCVEAE
CCCCHHHHHHHHHHHCCCEEEHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCEEHHH
IITEAMDVLEDGRARLLEFGVADETAWRSGLSCGGKIRVFVERID
HHHHHHHHHHCCHHHHHHCCCCCCHHHHCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MRDDDLLLLAQMWRESGRSVALATVVETWGSAPRPSGSHLVIDSEGHFEGSVSGGCVEAE
CCCCHHHHHHHHHHHCCCEEEHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCEEHHH
IITEAMDVLEDGRARLLEFGVADETAWRSGLSCGGKIRVFVERID
HHHHHHHHHHCCHHHHHHCCCCCCHHHHCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA