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The map label for this gene is 182679816

Identifier: 182679816

GI number: 182679816

Start: 3310375

End: 3311022

Strand: Reverse

Name: 182679816

Synonym: Bind_2905

Alternate gene names: NA

Gene position: 3311022-3310375 (Counterclockwise)

Preceding gene: 182679817

Following gene: 182679814

Centisome position: 79.4

GC content: 61.42

Gene sequence:

>648_bases
ATGAGAGAACCAAAACTTCGATGTGATCCCGCCTTCGGGACGTCCGCTCATGACCAGACCGGTTGGCGCCGGGGCCGAAA
GAGTCTCGCCCTCATGCTGTGTCTTGCCGGCGGACTCGCTGCGGCTCACGCGGAAGGGACCGCCGATGCGAAGCCCGAAG
GGGCTTTTGTCCCGCCGCATCCGATTCCCGGCGAAGTCATGAAAAATTGGCCCGTCTATCCGGAATCCGCCAAAATGGCC
AATCAGCAGGGCGTGGTCATGCTGAGCGTCAAAATCTCGGCGCAGGGCGATCCCGATGATGTTCGTGTGAAGAAAAGCAG
CAATTTTCCGATTCTGGACCGTTCTGCCGTCGAGGCCGTCCGGCGCTGGCATTTCGTCGCCGCCAAGCGCGATAATGTCC
CGGTCGAGACGGAGGTGACGCTGCCGATCAATTTCTCCTTGAAGGAGGGCGAACAGCCTGCGGGGGCCAAATCCGCACCC
AATCCCACCCCGAAACCTGCCCCCAAGACGGCTGCTGCCAAAACGGTGAAACCGGCTGCTCCCAAACCCGCCGGGTCTCA
TTCCGCACCTGCGGCTTCAAAATCAGGTGCGGTGACGGATCATGCGCCCGTGGCGGATAATGGTTCCGCTGGATCCGCGC
CGCGATAA

Upstream 100 bases:

>100_bases
GAAAATCGGCTCAAGCGTTGCTGTTGACAGAAGGGGTGAAGGTTAGAAGATTATATCGGTCACCCACCTCTTCGTTTAAA
AAAGCATCGGACATATCGGC

Downstream 100 bases:

>100_bases
AAGGGCTAAGCCTGTTTCCCTTATTTCCGCCGCGTCGGCGGGCGACGGGAGAAAGTGCTTTTCGTAGGCTTTGCGCCGCC
TTGCACCGTCTCGGTCTTTT

Product: TonB family protein

Products: NA

Alternate protein names: Periplasmic Protein nB; NB-Like Protein Ferric Siderophore Transporter; NB Periplasmic Protein; Nb Family Protein

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MREPKLRCDPAFGTSAHDQTGWRRGRKSLALMLCLAGGLAAAHAEGTADAKPEGAFVPPHPIPGEVMKNWPVYPESAKMA
NQQGVVMLSVKISAQGDPDDVRVKKSSNFPILDRSAVEAVRRWHFVAAKRDNVPVETEVTLPINFSLKEGEQPAGAKSAP
NPTPKPAPKTAAAKTVKPAAPKPAGSHSAPAASKSGAVTDHAPVADNGSAGSAPR

Sequences:

>Translated_215_residues
MREPKLRCDPAFGTSAHDQTGWRRGRKSLALMLCLAGGLAAAHAEGTADAKPEGAFVPPHPIPGEVMKNWPVYPESAKMA
NQQGVVMLSVKISAQGDPDDVRVKKSSNFPILDRSAVEAVRRWHFVAAKRDNVPVETEVTLPINFSLKEGEQPAGAKSAP
NPTPKPAPKTAAAKTVKPAAPKPAGSHSAPAASKSGAVTDHAPVADNGSAGSAPR
>Mature_215_residues
MREPKLRCDPAFGTSAHDQTGWRRGRKSLALMLCLAGGLAAAHAEGTADAKPEGAFVPPHPIPGEVMKNWPVYPESAKMA
NQQGVVMLSVKISAQGDPDDVRVKKSSNFPILDRSAVEAVRRWHFVAAKRDNVPVETEVTLPINFSLKEGEQPAGAKSAP
NPTPKPAPKTAAAKTVKPAAPKPAGSHSAPAASKSGAVTDHAPVADNGSAGSAPR

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22412; Mature: 22412

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREPKLRCDPAFGTSAHDQTGWRRGRKSLALMLCLAGGLAAAHAEGTADAKPEGAFVPPH
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCC
PIPGEVMKNWPVYPESAKMANQQGVVMLSVKISAQGDPDDVRVKKSSNFPILDRSAVEAV
CCCHHHHHCCCCCCCHHHHCCCCCEEEEEEEEECCCCCCCEEEEECCCCCEECHHHHHHH
RRWHFVAAKRDNVPVETEVTLPINFSLKEGEQPAGAKSAPNPTPKPAPKTAAAKTVKPAA
HHHHHHEECCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCC
PKPAGSHSAPAASKSGAVTDHAPVADNGSAGSAPR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MREPKLRCDPAFGTSAHDQTGWRRGRKSLALMLCLAGGLAAAHAEGTADAKPEGAFVPPH
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCC
PIPGEVMKNWPVYPESAKMANQQGVVMLSVKISAQGDPDDVRVKKSSNFPILDRSAVEAV
CCCHHHHHCCCCCCCHHHHCCCCCEEEEEEEEECCCCCCCEEEEECCCCCEECHHHHHHH
RRWHFVAAKRDNVPVETEVTLPINFSLKEGEQPAGAKSAPNPTPKPAPKTAAAKTVKPAA
HHHHHHEECCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCC
PKPAGSHSAPAASKSGAVTDHAPVADNGSAGSAPR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA