Click here to switch to the map view.

The map label for this gene is yqeB [H]

Identifier: 182679813

GI number: 182679813

Start: 3307886

End: 3308638

Strand: Reverse

Name: yqeB [H]

Synonym: Bind_2902

Alternate gene names: 182679813

Gene position: 3308638-3307886 (Counterclockwise)

Preceding gene: 182679814

Following gene: 182679812

Centisome position: 79.34

GC content: 58.03

Gene sequence:

>753_bases
ATGCGTTTGGCTTTGCTGGCGGAACTGAACGCGGCGCGCCGGGCACGCCGTCCCGTTCTGGTCATTACGGATCTTGGTTC
TGGACATCAAAGATTGATCTATGCTGACGAAATCCATGCCAGTGCTTCGGAGGAAGACGCTCTGGATGTTTCCTTGAAAG
CGGCCATCGAGACGCGCTTGCAACTCGGTCAAAGCGGTGCTTTGGACCACAATGGCCATTCCCTCTTCATAGAGGTGCAT
CGGCCGCCGACGCGGTTGATCGTGATCGGCGCGGGCCATATCGCTCAGGCCCTGGTTCCATTGGCTCGTTTGACGGGTTT
TGATGTACTCATCATCGATCCACGTACGGCCTTTGCCACGCCGGAACGCTTTCCCGATGTGAGGATTGTTTCGGAATGGC
CGCAGGTCGCCCTGCAAGAACAAACGCTCGATGCGCACACGGCTATGGCTGTTCTCAGCCATGATCCGCGTATCGACGAT
CCGGCCTTGATCGAAGCGCTGAGAGCCGACTGTTTCTATATCGGCGCGCTTGGTTCGCGTAAGACGCATGACAAGCGCCA
GGACCGATTGCGCGCTGAGGGTTTTGATGAGGCGGACCTCGCGCGTATTCATGCGCCGATCGGTCTCGATATCGGAGCAG
TGAGCCCTGTGGAAATTGCCATTTCCATCATGGCTGAGATCATTGCGTCCCTCAAACAGAAGCCCGCGCGCCAACCGGAA
GCAAAGGGCGCGGTCGCGGAAGCGGCGGTATGA

Upstream 100 bases:

>100_bases
GCGCGCGTCTCCTGGAATTTGGTGTCGCCGATGAAACGGCGTGGCGCTCTGGCCTCTCTTGTGGCGGCAAGATCCGGGTT
TTCGTCGAGAGGATAGATTG

Downstream 100 bases:

>100_bases
GCCCAGTGAAATGAAATGATCCTCGGATGAATGAAAAAAAGAAGGTCGTCGCCGTCATATTGGCGGCAGGCCAGGGTCAC
CGTTTCGCCGCGACAGGTGG

Product: xanthine dehydrogenase accessory factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MRLALLAELNAARRARRPVLVITDLGSGHQRLIYADEIHASASEEDALDVSLKAAIETRLQLGQSGALDHNGHSLFIEVH
RPPTRLIVIGAGHIAQALVPLARLTGFDVLIIDPRTAFATPERFPDVRIVSEWPQVALQEQTLDAHTAMAVLSHDPRIDD
PALIEALRADCFYIGALGSRKTHDKRQDRLRAEGFDEADLARIHAPIGLDIGAVSPVEIAISIMAEIIASLKQKPARQPE
AKGAVAEAAV

Sequences:

>Translated_250_residues
MRLALLAELNAARRARRPVLVITDLGSGHQRLIYADEIHASASEEDALDVSLKAAIETRLQLGQSGALDHNGHSLFIEVH
RPPTRLIVIGAGHIAQALVPLARLTGFDVLIIDPRTAFATPERFPDVRIVSEWPQVALQEQTLDAHTAMAVLSHDPRIDD
PALIEALRADCFYIGALGSRKTHDKRQDRLRAEGFDEADLARIHAPIGLDIGAVSPVEIAISIMAEIIASLKQKPARQPE
AKGAVAEAAV
>Mature_250_residues
MRLALLAELNAARRARRPVLVITDLGSGHQRLIYADEIHASASEEDALDVSLKAAIETRLQLGQSGALDHNGHSLFIEVH
RPPTRLIVIGAGHIAQALVPLARLTGFDVLIIDPRTAFATPERFPDVRIVSEWPQVALQEQTLDAHTAMAVLSHDPRIDD
PALIEALRADCFYIGALGSRKTHDKRQDRLRAEGFDEADLARIHAPIGLDIGAVSPVEIAISIMAEIIASLKQKPARQPE
AKGAVAEAAV

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789240, Length=223, Percent_Identity=31.8385650224215, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR017695
- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 27079; Mature: 27079

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLALLAELNAARRARRPVLVITDLGSGHQRLIYADEIHASASEEDALDVSLKAAIETRL
CCEEEEHHHHHHHHHCCCEEEEEECCCCCEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHH
QLGQSGALDHNGHSLFIEVHRPPTRLIVIGAGHIAQALVPLARLTGFDVLIIDPRTAFAT
HCCCCCCCCCCCCEEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCCEEEEECCCCCCCC
PERFPDVRIVSEWPQVALQEQTLDAHTAMAVLSHDPRIDDPALIEALRADCFYIGALGSR
CCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCEEEEECCCCC
KTHDKRQDRLRAEGFDEADLARIHAPIGLDIGAVSPVEIAISIMAEIIASLKQKPARQPE
CCCHHHHHHHHHCCCCHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
AKGAVAEAAV
CCCCHHHCCC
>Mature Secondary Structure
MRLALLAELNAARRARRPVLVITDLGSGHQRLIYADEIHASASEEDALDVSLKAAIETRL
CCEEEEHHHHHHHHHCCCEEEEEECCCCCEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHH
QLGQSGALDHNGHSLFIEVHRPPTRLIVIGAGHIAQALVPLARLTGFDVLIIDPRTAFAT
HCCCCCCCCCCCCEEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCCEEEEECCCCCCCC
PERFPDVRIVSEWPQVALQEQTLDAHTAMAVLSHDPRIDDPALIEALRADCFYIGALGSR
CCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCEEEEECCCCC
KTHDKRQDRLRAEGFDEADLARIHAPIGLDIGAVSPVEIAISIMAEIIASLKQKPARQPE
CCCHHHHHHHHHCCCCHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
AKGAVAEAAV
CCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]