Definition Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome.
Accession NC_010581
Length 4,170,153

Click here to switch to the map view.

The map label for this gene is ygfJ [C]

Identifier: 182679812

GI number: 182679812

Start: 3307251

End: 3307859

Strand: Reverse

Name: ygfJ [C]

Synonym: Bind_2901

Alternate gene names: 182679812

Gene position: 3307859-3307251 (Counterclockwise)

Preceding gene: 182679813

Following gene: 182679811

Centisome position: 79.32

GC content: 57.64

Gene sequence:

>609_bases
ATGAATGAAAAAAAGAAGGTCGTCGCCGTCATATTGGCGGCAGGCCAGGGTCACCGTTTCGCCGCGACAGGTGGAGGCAA
TAAGCTGCTTGCCGAATTCAAGGGCAAGGCCCTTGTTCGCCATGTCACCGAGGCTGCTTTGTCTTCCTCAGCCTGTCCCG
TCATGGTCGTGACGGGCCATGAGCGTGAGGCTATCGAACGGATTTTGGGCGATCTGCCTGTCTCCTTCGTCCATAATCCC
GATTATGGGGAAGGCCTCTCGACGTCCTTGCGGTGTGCGCTCGCAGCCTTGCCGCAAGAAGCGGTCGGCATGATCGTGCT
CTTGGGCGACATGCCGCTCGTCACGAGCACTCTCGTCACGGATCTCGTGATGCGATTCGAGGAAAGCTCATACGAATCCG
CGGCGGTTTTTCCCAGCTATCGCGGCAGACGCGGCAATCCGGTGCTCTTGGGGCATAAATTATTCAAGGCCATTGCGGGT
CTCGCGGGGGATCAGGGTGCGCGGCGTCTGATCGAGAGCGGGAGTCAGGATGTGCTTGAATGGCCAGTCGAGAATGCTGG
CATCCTCGTCGATGTCGATACGGAAGACAGCCTTAAATCAATCGTATAG

Upstream 100 bases:

>100_bases
TCATTGCGTCCCTCAAACAGAAGCCCGCGCGCCAACCGGAAGCAAAGGGCGCGGTCGCGGAAGCGGCGGTATGAGCCCAG
TGAAATGAAATGATCCTCGG

Downstream 100 bases:

>100_bases
AGTTTAGGATCAAGATCCTGAACGGGATGCCGCAGCACAGGACCCGCGCCAGCAATGAGGCGCGGGCTCGAAAGGGGATT
AAAACGGCAAGGTTTTTGAT

Product: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase

Products: NA

Alternate protein names: Metal Dependent Phosphohydrolase; MobA-Like Protein-Like Protein; Molybdopterin-Guanine Dinucleotide Biosynthesis Protein A; Molybdenum Hydroxylase Accessory Protein YgfJ Family; MobA-Like Protein; Purine Catabolism Protein PucB; 4-Diphosphocytidyl-2C-Methyl-D-Erythritolsynthas E; Molybdenum Cofactor Cytidylyltransferase; Molybdenum Cofactor Biosynthesis Protein; Molybdopterin Biosynthesis; Nucleotidyl Transferase; MobA-Related Protein; UDP-N-Acetylglucosamine Pyrophosphorylase; Protein Family UPF; Xanthine Dehydrogenase Subunit B; 4-Diphosphocytidyl-2c-Methyl-D-Erythritol Synthase; Metal-Dependent Phosphohydrolase HD Sub Domain Protein; Hypotehtical YgfJ; Molybdenum Hydroxylase Accessory Protein; Conserved MobA-Related Protein; L-Seryl-TRNA(Ser) Selenium Transferase Protein; MobA-Like Protein-Like; Molybdopterin Molybdochelatase; Phosphoglycerate/Bisphosphoglycerate Mutase; MobA-Like Molybdenum Cofactor Biosynthesis Protein; Xanthine Dehydrogenase Accessory Protein PucB; MobA-Like Protein Protein; Carbon Monoxide Dehydrogenase Accesory Protein; Nucleotide-Diphospho-Sugar Transferase; Domain HDIG Containing Protein

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MNEKKKVVAVILAAGQGHRFAATGGGNKLLAEFKGKALVRHVTEAALSSSACPVMVVTGHEREAIERILGDLPVSFVHNP
DYGEGLSTSLRCALAALPQEAVGMIVLLGDMPLVTSTLVTDLVMRFEESSYESAAVFPSYRGRRGNPVLLGHKLFKAIAG
LAGDQGARRLIESGSQDVLEWPVENAGILVDVDTEDSLKSIV

Sequences:

>Translated_202_residues
MNEKKKVVAVILAAGQGHRFAATGGGNKLLAEFKGKALVRHVTEAALSSSACPVMVVTGHEREAIERILGDLPVSFVHNP
DYGEGLSTSLRCALAALPQEAVGMIVLLGDMPLVTSTLVTDLVMRFEESSYESAAVFPSYRGRRGNPVLLGHKLFKAIAG
LAGDQGARRLIESGSQDVLEWPVENAGILVDVDTEDSLKSIV
>Mature_202_residues
MNEKKKVVAVILAAGQGHRFAATGGGNKLLAEFKGKALVRHVTEAALSSSACPVMVVTGHEREAIERILGDLPVSFVHNP
DYGEGLSTSLRCALAALPQEAVGMIVLLGDMPLVTSTLVTDLVMRFEESSYESAAVFPSYRGRRGNPVLLGHKLFKAIAG
LAGDQGARRLIESGSQDVLEWPVENAGILVDVDTEDSLKSIV

Specific function: Unknown

COG id: COG2068

COG function: function code R; Uncharacterized MobA-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789242, Length=191, Percent_Identity=28.7958115183246, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21451; Mature: 21451

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEKKKVVAVILAAGQGHRFAATGGGNKLLAEFKGKALVRHVTEAALSSSACPVMVVTGH
CCCCCEEEEEEEECCCCCEEEECCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECC
EREAIERILGDLPVSFVHNPDYGEGLSTSLRCALAALPQEAVGMIVLLGDMPLVTSTLVT
CHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHCCHHHHEEEEEECCCCHHHHHHHH
DLVMRFEESSYESAAVFPSYRGRRGNPVLLGHKLFKAIAGLAGDQGARRLIESGSQDVLE
HHHHHHHCCCCCCEEECCCCCCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHCCCHHHHH
WPVENAGILVDVDTEDSLKSIV
CCCCCCCEEEEECCCHHHHHCC
>Mature Secondary Structure
MNEKKKVVAVILAAGQGHRFAATGGGNKLLAEFKGKALVRHVTEAALSSSACPVMVVTGH
CCCCCEEEEEEEECCCCCEEEECCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECC
EREAIERILGDLPVSFVHNPDYGEGLSTSLRCALAALPQEAVGMIVLLGDMPLVTSTLVT
CHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHCCHHHHEEEEEECCCCHHHHHHHH
DLVMRFEESSYESAAVFPSYRGRRGNPVLLGHKLFKAIAGLAGDQGARRLIESGSQDVLE
HHHHHHHCCCCCCEEECCCCCCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHCCCHHHHH
WPVENAGILVDVDTEDSLKSIV
CCCCCCCEEEEECCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA