| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is ygfJ [C]
Identifier: 182679812
GI number: 182679812
Start: 3307251
End: 3307859
Strand: Reverse
Name: ygfJ [C]
Synonym: Bind_2901
Alternate gene names: 182679812
Gene position: 3307859-3307251 (Counterclockwise)
Preceding gene: 182679813
Following gene: 182679811
Centisome position: 79.32
GC content: 57.64
Gene sequence:
>609_bases ATGAATGAAAAAAAGAAGGTCGTCGCCGTCATATTGGCGGCAGGCCAGGGTCACCGTTTCGCCGCGACAGGTGGAGGCAA TAAGCTGCTTGCCGAATTCAAGGGCAAGGCCCTTGTTCGCCATGTCACCGAGGCTGCTTTGTCTTCCTCAGCCTGTCCCG TCATGGTCGTGACGGGCCATGAGCGTGAGGCTATCGAACGGATTTTGGGCGATCTGCCTGTCTCCTTCGTCCATAATCCC GATTATGGGGAAGGCCTCTCGACGTCCTTGCGGTGTGCGCTCGCAGCCTTGCCGCAAGAAGCGGTCGGCATGATCGTGCT CTTGGGCGACATGCCGCTCGTCACGAGCACTCTCGTCACGGATCTCGTGATGCGATTCGAGGAAAGCTCATACGAATCCG CGGCGGTTTTTCCCAGCTATCGCGGCAGACGCGGCAATCCGGTGCTCTTGGGGCATAAATTATTCAAGGCCATTGCGGGT CTCGCGGGGGATCAGGGTGCGCGGCGTCTGATCGAGAGCGGGAGTCAGGATGTGCTTGAATGGCCAGTCGAGAATGCTGG CATCCTCGTCGATGTCGATACGGAAGACAGCCTTAAATCAATCGTATAG
Upstream 100 bases:
>100_bases TCATTGCGTCCCTCAAACAGAAGCCCGCGCGCCAACCGGAAGCAAAGGGCGCGGTCGCGGAAGCGGCGGTATGAGCCCAG TGAAATGAAATGATCCTCGG
Downstream 100 bases:
>100_bases AGTTTAGGATCAAGATCCTGAACGGGATGCCGCAGCACAGGACCCGCGCCAGCAATGAGGCGCGGGCTCGAAAGGGGATT AAAACGGCAAGGTTTTTGAT
Product: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase
Products: NA
Alternate protein names: Metal Dependent Phosphohydrolase; MobA-Like Protein-Like Protein; Molybdopterin-Guanine Dinucleotide Biosynthesis Protein A; Molybdenum Hydroxylase Accessory Protein YgfJ Family; MobA-Like Protein; Purine Catabolism Protein PucB; 4-Diphosphocytidyl-2C-Methyl-D-Erythritolsynthas E; Molybdenum Cofactor Cytidylyltransferase; Molybdenum Cofactor Biosynthesis Protein; Molybdopterin Biosynthesis; Nucleotidyl Transferase; MobA-Related Protein; UDP-N-Acetylglucosamine Pyrophosphorylase; Protein Family UPF; Xanthine Dehydrogenase Subunit B; 4-Diphosphocytidyl-2c-Methyl-D-Erythritol Synthase; Metal-Dependent Phosphohydrolase HD Sub Domain Protein; Hypotehtical YgfJ; Molybdenum Hydroxylase Accessory Protein; Conserved MobA-Related Protein; L-Seryl-TRNA(Ser) Selenium Transferase Protein; MobA-Like Protein-Like; Molybdopterin Molybdochelatase; Phosphoglycerate/Bisphosphoglycerate Mutase; MobA-Like Molybdenum Cofactor Biosynthesis Protein; Xanthine Dehydrogenase Accessory Protein PucB; MobA-Like Protein Protein; Carbon Monoxide Dehydrogenase Accesory Protein; Nucleotide-Diphospho-Sugar Transferase; Domain HDIG Containing Protein
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MNEKKKVVAVILAAGQGHRFAATGGGNKLLAEFKGKALVRHVTEAALSSSACPVMVVTGHEREAIERILGDLPVSFVHNP DYGEGLSTSLRCALAALPQEAVGMIVLLGDMPLVTSTLVTDLVMRFEESSYESAAVFPSYRGRRGNPVLLGHKLFKAIAG LAGDQGARRLIESGSQDVLEWPVENAGILVDVDTEDSLKSIV
Sequences:
>Translated_202_residues MNEKKKVVAVILAAGQGHRFAATGGGNKLLAEFKGKALVRHVTEAALSSSACPVMVVTGHEREAIERILGDLPVSFVHNP DYGEGLSTSLRCALAALPQEAVGMIVLLGDMPLVTSTLVTDLVMRFEESSYESAAVFPSYRGRRGNPVLLGHKLFKAIAG LAGDQGARRLIESGSQDVLEWPVENAGILVDVDTEDSLKSIV >Mature_202_residues MNEKKKVVAVILAAGQGHRFAATGGGNKLLAEFKGKALVRHVTEAALSSSACPVMVVTGHEREAIERILGDLPVSFVHNP DYGEGLSTSLRCALAALPQEAVGMIVLLGDMPLVTSTLVTDLVMRFEESSYESAAVFPSYRGRRGNPVLLGHKLFKAIAG LAGDQGARRLIESGSQDVLEWPVENAGILVDVDTEDSLKSIV
Specific function: Unknown
COG id: COG2068
COG function: function code R; Uncharacterized MobA-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789242, Length=191, Percent_Identity=28.7958115183246, Blast_Score=65, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21451; Mature: 21451
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEKKKVVAVILAAGQGHRFAATGGGNKLLAEFKGKALVRHVTEAALSSSACPVMVVTGH CCCCCEEEEEEEECCCCCEEEECCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECC EREAIERILGDLPVSFVHNPDYGEGLSTSLRCALAALPQEAVGMIVLLGDMPLVTSTLVT CHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHCCHHHHEEEEEECCCCHHHHHHHH DLVMRFEESSYESAAVFPSYRGRRGNPVLLGHKLFKAIAGLAGDQGARRLIESGSQDVLE HHHHHHHCCCCCCEEECCCCCCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHCCCHHHHH WPVENAGILVDVDTEDSLKSIV CCCCCCCEEEEECCCHHHHHCC >Mature Secondary Structure MNEKKKVVAVILAAGQGHRFAATGGGNKLLAEFKGKALVRHVTEAALSSSACPVMVVTGH CCCCCEEEEEEEECCCCCEEEECCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECC EREAIERILGDLPVSFVHNPDYGEGLSTSLRCALAALPQEAVGMIVLLGDMPLVTSTLVT CHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHCCHHHHEEEEEECCCCHHHHHHHH DLVMRFEESSYESAAVFPSYRGRRGNPVLLGHKLFKAIAGLAGDQGARRLIESGSQDVLE HHHHHHHCCCCCCEEECCCCCCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHCCCHHHHH WPVENAGILVDVDTEDSLKSIV CCCCCCCEEEEECCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA