Definition Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome.
Accession NC_010581
Length 4,170,153

Click here to switch to the map view.

The map label for this gene is usg [H]

Identifier: 182679811

GI number: 182679811

Start: 3306724

End: 3307023

Strand: Reverse

Name: usg [H]

Synonym: Bind_2900

Alternate gene names: 182679811

Gene position: 3307023-3306724 (Counterclockwise)

Preceding gene: 182679812

Following gene: 182679807

Centisome position: 79.3

GC content: 52.0

Gene sequence:

>300_bases
ATGGCGGATCGGCTCAAGAATGAAGACGTCGTGACATTCGAGGAAAGGCTGAGGCAGCTCGGCGGCTATGGCTTGGCCAC
AGCGGAAATTCTCTACCGTCTGCCGGATTACCCCATGCTGCTCCAAACTTATATCTGGCAAGATTATGATATTGCCCCAG
AATTTCCCACTCTGCTGAAATTCCTGAATTTCTGGCAAAATAGACTGGATGGCGCCCTCTATAGCGTGACGGTGGGGCAT
TCAAAATTGCTTAAGCCGGCGGAAATCCGGGCTGTGGGCGGCGAGTTTCTGCTGAATTGA

Upstream 100 bases:

>100_bases
AAGGCGCAGAACGGGAATTATGCCATGACATGGCTGTAGCGTCTCCTAGACGAAACATCGCCGCTTGGCAAGCTTGGTTT
TGCTGAAATGGAGGTCGAAT

Downstream 100 bases:

>100_bases
AATTGCGCCAATGCATCGGATCGATCCCCGAAAGGTTCCGTTTCTGGCTCGCGCTCTTTTGACGGTTGAGGAGCGCCATG
AGGTCAACGGGCGGAACAGC

Product: Usg family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MADRLKNEDVVTFEERLRQLGGYGLATAEILYRLPDYPMLLQTYIWQDYDIAPEFPTLLKFLNFWQNRLDGALYSVTVGH
SKLLKPAEIRAVGGEFLLN

Sequences:

>Translated_99_residues
MADRLKNEDVVTFEERLRQLGGYGLATAEILYRLPDYPMLLQTYIWQDYDIAPEFPTLLKFLNFWQNRLDGALYSVTVGH
SKLLKPAEIRAVGGEFLLN
>Mature_98_residues
ADRLKNEDVVTFEERLRQLGGYGLATAEILYRLPDYPMLLQTYIWQDYDIAPEFPTLLKFLNFWQNRLDGALYSVTVGHS
KLLKPAEIRAVGGEFLLN

Specific function: Probably necessary for the cotranslation of trpF. It may also function as a subunit or stabilizer of phosphoribosylanthranilate isomerase (trpF) [H]

COG id: COG5425

COG function: function code E; Usg protein, probable subunit of phosphoribosylanthranilate isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009354 [H]

Pfam domain/function: PF06233 Usg [H]

EC number: NA

Molecular weight: Translated: 11452; Mature: 11321

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADRLKNEDVVTFEERLRQLGGYGLATAEILYRLPDYPMLLQTYIWQDYDIAPEFPTLLK
CCCCCCCCCEEHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHH
FLNFWQNRLDGALYSVTVGHSKLLKPAEIRAVGGEFLLN
HHHHHHHHHCCHHEEEECCHHHCCCCHHHHHCCCHHHCC
>Mature Secondary Structure 
ADRLKNEDVVTFEERLRQLGGYGLATAEILYRLPDYPMLLQTYIWQDYDIAPEFPTLLK
CCCCCCCCEEHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHH
FLNFWQNRLDGALYSVTVGHSKLLKPAEIRAVGGEFLLN
HHHHHHHHHCCHHEEEECCHHHCCCCHHHHHCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2828322; 11259647 [H]