| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is usg [H]
Identifier: 182679811
GI number: 182679811
Start: 3306724
End: 3307023
Strand: Reverse
Name: usg [H]
Synonym: Bind_2900
Alternate gene names: 182679811
Gene position: 3307023-3306724 (Counterclockwise)
Preceding gene: 182679812
Following gene: 182679807
Centisome position: 79.3
GC content: 52.0
Gene sequence:
>300_bases ATGGCGGATCGGCTCAAGAATGAAGACGTCGTGACATTCGAGGAAAGGCTGAGGCAGCTCGGCGGCTATGGCTTGGCCAC AGCGGAAATTCTCTACCGTCTGCCGGATTACCCCATGCTGCTCCAAACTTATATCTGGCAAGATTATGATATTGCCCCAG AATTTCCCACTCTGCTGAAATTCCTGAATTTCTGGCAAAATAGACTGGATGGCGCCCTCTATAGCGTGACGGTGGGGCAT TCAAAATTGCTTAAGCCGGCGGAAATCCGGGCTGTGGGCGGCGAGTTTCTGCTGAATTGA
Upstream 100 bases:
>100_bases AAGGCGCAGAACGGGAATTATGCCATGACATGGCTGTAGCGTCTCCTAGACGAAACATCGCCGCTTGGCAAGCTTGGTTT TGCTGAAATGGAGGTCGAAT
Downstream 100 bases:
>100_bases AATTGCGCCAATGCATCGGATCGATCCCCGAAAGGTTCCGTTTCTGGCTCGCGCTCTTTTGACGGTTGAGGAGCGCCATG AGGTCAACGGGCGGAACAGC
Product: Usg family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MADRLKNEDVVTFEERLRQLGGYGLATAEILYRLPDYPMLLQTYIWQDYDIAPEFPTLLKFLNFWQNRLDGALYSVTVGH SKLLKPAEIRAVGGEFLLN
Sequences:
>Translated_99_residues MADRLKNEDVVTFEERLRQLGGYGLATAEILYRLPDYPMLLQTYIWQDYDIAPEFPTLLKFLNFWQNRLDGALYSVTVGH SKLLKPAEIRAVGGEFLLN >Mature_98_residues ADRLKNEDVVTFEERLRQLGGYGLATAEILYRLPDYPMLLQTYIWQDYDIAPEFPTLLKFLNFWQNRLDGALYSVTVGHS KLLKPAEIRAVGGEFLLN
Specific function: Probably necessary for the cotranslation of trpF. It may also function as a subunit or stabilizer of phosphoribosylanthranilate isomerase (trpF) [H]
COG id: COG5425
COG function: function code E; Usg protein, probable subunit of phosphoribosylanthranilate isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009354 [H]
Pfam domain/function: PF06233 Usg [H]
EC number: NA
Molecular weight: Translated: 11452; Mature: 11321
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADRLKNEDVVTFEERLRQLGGYGLATAEILYRLPDYPMLLQTYIWQDYDIAPEFPTLLK CCCCCCCCCEEHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHH FLNFWQNRLDGALYSVTVGHSKLLKPAEIRAVGGEFLLN HHHHHHHHHCCHHEEEECCHHHCCCCHHHHHCCCHHHCC >Mature Secondary Structure ADRLKNEDVVTFEERLRQLGGYGLATAEILYRLPDYPMLLQTYIWQDYDIAPEFPTLLK CCCCCCCCEEHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHH FLNFWQNRLDGALYSVTVGHSKLLKPAEIRAVGGEFLLN HHHHHHHHHCCHHEEEECCHHHCCCCHHHHHCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2828322; 11259647 [H]