| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182679670
Identifier: 182679670
GI number: 182679670
Start: 3139748
End: 3140557
Strand: Reverse
Name: 182679670
Synonym: Bind_2755
Alternate gene names: NA
Gene position: 3140557-3139748 (Counterclockwise)
Preceding gene: 182679681
Following gene: 182679669
Centisome position: 75.31
GC content: 53.21
Gene sequence:
>810_bases ATGCTTTGGATCGGCAGAATGAAGCGACGGGACTGGTTGCCCATCGGGGCTGTGGCGGGATTGGTCTTGTCGGTGGTGAT GACCGGCCCCAGCACTGCGGACGATCAGGCGCGGGAAGCGGATGCGATCGTGAAGGCCATGTCGGATTATCTGGCCAGCC AGAAAACGATCGCTTTCGATTTCGATACGGAAATAGAAGTTGTCACGCCGCTGAACCAGAAGCTGCAGTTCAACAGTTCT GGCAATGTGAATATCAGTCGGCCCTCCAATTTCCGGGTGCAACGCACGGGCGGCTATGTCGATGCCGAGCTTATCGATGA TGGAAAGACGGTCACGCTATTTGGAAAACGTATCAATAAATATGCGCAATTAGATGCCAGCGGCTCGTTCGATCAGGTTA TCGATGATCTTCGCAATAAATATTCTGTGGATCTGCCTGCTGCCGATTTCTTCGTTTCCAATCCTTATCACGTGCTCCTG GAAGATGTCATCGAGGGCAAACATATCGGCCGAGGCGTGATTGATGGTGTGGAGTGCGAACATTTGGCATTCCGTAACAG CGATGCGGACTGGCAGCTCTGGGTTCGGGTGGGCGACAAGCCGATTCCATGCAAATATCTGATCACCAGCAAGGCGGTCG GTGAGGCGCCGCAATATTCGATCCGTTTCAAGAATTGGAAGACCGACGTTTCCTTCGCGCCGGATGCTTTCACCTTCAAG CCGCCGGCCGATGCGCAAAAAGTTGATCTTGGTCAATTGCCAAATTTGGATGAGGTTCCTGACAGCGCGCCTGTAGGAGG GCAGAAATGA
Upstream 100 bases:
>100_bases ATAGCTGGTGTTTTGTGCCTGCTCGAGCATATTCTGACGACAGATAGAGACACCATAAGAGAGAGATGGTGAAGACAGCA ATAGCAGGGGAGCGTGAACA
Downstream 100 bases:
>100_bases TAGGCTTTCGGAAGAAGATTTTCTTTTCCACCTGCGTGGCGGGCCTGATGGCTTTTGTCTTGTTGGTGAATGATCATCCC TCGCACTCCTCCAATGGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MLWIGRMKRRDWLPIGAVAGLVLSVVMTGPSTADDQAREADAIVKAMSDYLASQKTIAFDFDTEIEVVTPLNQKLQFNSS GNVNISRPSNFRVQRTGGYVDAELIDDGKTVTLFGKRINKYAQLDASGSFDQVIDDLRNKYSVDLPAADFFVSNPYHVLL EDVIEGKHIGRGVIDGVECEHLAFRNSDADWQLWVRVGDKPIPCKYLITSKAVGEAPQYSIRFKNWKTDVSFAPDAFTFK PPADAQKVDLGQLPNLDEVPDSAPVGGQK
Sequences:
>Translated_269_residues MLWIGRMKRRDWLPIGAVAGLVLSVVMTGPSTADDQAREADAIVKAMSDYLASQKTIAFDFDTEIEVVTPLNQKLQFNSS GNVNISRPSNFRVQRTGGYVDAELIDDGKTVTLFGKRINKYAQLDASGSFDQVIDDLRNKYSVDLPAADFFVSNPYHVLL EDVIEGKHIGRGVIDGVECEHLAFRNSDADWQLWVRVGDKPIPCKYLITSKAVGEAPQYSIRFKNWKTDVSFAPDAFTFK PPADAQKVDLGQLPNLDEVPDSAPVGGQK >Mature_269_residues MLWIGRMKRRDWLPIGAVAGLVLSVVMTGPSTADDQAREADAIVKAMSDYLASQKTIAFDFDTEIEVVTPLNQKLQFNSS GNVNISRPSNFRVQRTGGYVDAELIDDGKTVTLFGKRINKYAQLDASGSFDQVIDDLRNKYSVDLPAADFFVSNPYHVLL EDVIEGKHIGRGVIDGVECEHLAFRNSDADWQLWVRVGDKPIPCKYLITSKAVGEAPQYSIRFKNWKTDVSFAPDAFTFK PPADAQKVDLGQLPNLDEVPDSAPVGGQK
Specific function: Unknown
COG id: COG3900
COG function: function code S; Predicted periplasmic protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29755; Mature: 29755
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLWIGRMKRRDWLPIGAVAGLVLSVVMTGPSTADDQAREADAIVKAMSDYLASQKTIAFD CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEE FDTEIEVVTPLNQKLQFNSSGNVNISRPSNFRVQRTGGYVDAELIDDGKTVTLFGKRINK CCCCEEEECCCCCEEEECCCCCEEEECCCCEEEEECCCEEEEEEECCCCEEEEEHHHHHH YAQLDASGSFDQVIDDLRNKYSVDLPAADFFVSNPYHVLLEDVIEGKHIGRGVIDGVECE HHCCCCCCCHHHHHHHHHHHEECCCCCHHEEECCCHHHHHHHHHCCCCCCCCCCCCCCCC HLAFRNSDADWQLWVRVGDKPIPCKYLITSKAVGEAPQYSIRFKNWKTDVSFAPDAFTFK EEEECCCCCCEEEEEEECCCCCCEEEEEECHHCCCCCCEEEEEECCCCCCCCCCCCCEEC PPADAQKVDLGQLPNLDEVPDSAPVGGQK CCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLWIGRMKRRDWLPIGAVAGLVLSVVMTGPSTADDQAREADAIVKAMSDYLASQKTIAFD CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEE FDTEIEVVTPLNQKLQFNSSGNVNISRPSNFRVQRTGGYVDAELIDDGKTVTLFGKRINK CCCCEEEECCCCCEEEECCCCCEEEECCCCEEEEECCCEEEEEEECCCCEEEEEHHHHHH YAQLDASGSFDQVIDDLRNKYSVDLPAADFFVSNPYHVLLEDVIEGKHIGRGVIDGVECE HHCCCCCCCHHHHHHHHHHHEECCCCCHHEEECCCHHHHHHHHHCCCCCCCCCCCCCCCC HLAFRNSDADWQLWVRVGDKPIPCKYLITSKAVGEAPQYSIRFKNWKTDVSFAPDAFTFK EEEECCCCCCEEEEEEECCCCCCEEEEEECHHCCCCCCEEEEEECCCCCCCCCCCCCEEC PPADAQKVDLGQLPNLDEVPDSAPVGGQK CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA