| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182679681
Identifier: 182679681
GI number: 182679681
Start: 3156640
End: 3157650
Strand: Reverse
Name: 182679681
Synonym: Bind_2766
Alternate gene names: NA
Gene position: 3157650-3156640 (Counterclockwise)
Preceding gene: 182679696
Following gene: 182679670
Centisome position: 75.72
GC content: 63.8
Gene sequence:
>1011_bases ATGGGAAGGCTGCGCATTGCCGATGTCGCAGAACGAGCGGGCGTCGGGATCGCCACAGTGGATCGGGTGCTCAACCGACG GGCGCCGGTTCGGGACGAGACCATGCAGAAGGTTCTCGCCGCAGCAGAAGCGCTTGGATACCACAATACCAGCCTCCTGC GCCGGCGGATGGAGGAGACCCGGCCGCCGAAGAGGCTTGGTGTTCTGCTGCAACGGCGCAGCGAGCCCTTCTATCAGGGA TTTGCTGGCCTTCTCACCCAGGCCGCGCGTAGCGGGAGGGCCCGGATGAGAATCGAGTTTTGTCCGGACCTTGCTCCCGC CACAGTATCCGATCGCATCACTGACCTTGCCGAGGGCTGCGATGTGATCGCTGTGGTCGCCGCCGATCATCCTCGCATTA GCGCGACGGTTGAGGCTCTAGCCACGCGGATGCCGGTCTTCACGCTGCTGTCCGATCTCGGCACCCAGGCGCGGACCGCC TTTTTCGGGGTCGATCATCGCAAGGCCGGCCGGCTTGCCGCCTGGAGCATCGCCCGGCTGGCGCGTCGACCTGGGCCGGT GGTGGTCATGGTGGGCAGTCATCGCTATCTCGGGCACGAGGAGACGGAGATCGCGTTCGCCGAATTTTTCCGGCAATCGG CGCCGGACTTTGAGGTCCTGCCGCCCATCGTCAGCCTGGAGGATGCTCACATGGCCAAGGAGGGTGTCCTCGATTTACTC GGCCGAAGGCCTGATCTCGCCGGTATCTATATCGCTTGTTCCGGCTTCTCGGGCGCCATAGCTGCCTTGCGGGAGCAAGC GGAGCCGGGGAGGGCTATTACCATTTCGAACGAACTGACCATCGAGACGCGTGCGGGGCTCGAGAGCGGAGTCCTCGATG TGGTGTTGGGCACGCCCATCGACCAGATCGCCCACGACCTCATCGGCTGGATGACAGGGTCCCGCCCCGAAAGCGAGCCG GCGCGCAGGAACCTTTATCCGATCACGATGCATGTTGTGGAGAACATTTGA
Upstream 100 bases:
>100_bases GCGATTGATTTATTGCAGGCAATAACGCCATGATAGTTTCTATCAAAACACTCACCGTCCTTCGTAGGCGGTGATGCAAG AACTATCAGGGAGGCCGTCC
Downstream 100 bases:
>100_bases CCGAACCGGTTTTCGCGAAGCATCGAGCCGCCAACCGAGGCGCGTGACAAGTCGCGCCTCGATCGTGAAGCGAAGCCTCC TTATGGCAATTCCTGCCAAG
Product: LacI family transcription regulator
Products: NA
Alternate protein names: LacI Family Transcription Regulator; LacI Family Transcriptional Regulator; Regulatory Protein LacI; Transcriptional Regulator; Transcriptional Regulator Protein; Transcriptional Regulator Protein LacI Family; LacI Family Regulatory Protein; Transcriptional Regulator LacI Family Protein; Transcription Regulator Protein; HTH-Type Transcriptional Repressor PurR; Regulatory Protein LacI Family; HTH-Type Transcriptional Regulator MalR; LacI Regulatory Protein; ABC-Type Sugar Transport System Periplasmic Component; Regulatory Protein; Sugar ABC Transporter Periplasmic Protein; Laci-Related Transcriptional Regulator Protein; LacI Family Regulatory; HTH-Type Transcriptional Repressor Purr; Laci-Family Transcription Regulator; Transcriptional Regulatory Protein LacI Family; Transcription Regulator
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MGRLRIADVAERAGVGIATVDRVLNRRAPVRDETMQKVLAAAEALGYHNTSLLRRRMEETRPPKRLGVLLQRRSEPFYQG FAGLLTQAARSGRARMRIEFCPDLAPATVSDRITDLAEGCDVIAVVAADHPRISATVEALATRMPVFTLLSDLGTQARTA FFGVDHRKAGRLAAWSIARLARRPGPVVVMVGSHRYLGHEETEIAFAEFFRQSAPDFEVLPPIVSLEDAHMAKEGVLDLL GRRPDLAGIYIACSGFSGAIAALREQAEPGRAITISNELTIETRAGLESGVLDVVLGTPIDQIAHDLIGWMTGSRPESEP ARRNLYPITMHVVENI
Sequences:
>Translated_336_residues MGRLRIADVAERAGVGIATVDRVLNRRAPVRDETMQKVLAAAEALGYHNTSLLRRRMEETRPPKRLGVLLQRRSEPFYQG FAGLLTQAARSGRARMRIEFCPDLAPATVSDRITDLAEGCDVIAVVAADHPRISATVEALATRMPVFTLLSDLGTQARTA FFGVDHRKAGRLAAWSIARLARRPGPVVVMVGSHRYLGHEETEIAFAEFFRQSAPDFEVLPPIVSLEDAHMAKEGVLDLL GRRPDLAGIYIACSGFSGAIAALREQAEPGRAITISNELTIETRAGLESGVLDVVLGTPIDQIAHDLIGWMTGSRPESEP ARRNLYPITMHVVENI >Mature_335_residues GRLRIADVAERAGVGIATVDRVLNRRAPVRDETMQKVLAAAEALGYHNTSLLRRRMEETRPPKRLGVLLQRRSEPFYQGF AGLLTQAARSGRARMRIEFCPDLAPATVSDRITDLAEGCDVIAVVAADHPRISATVEALATRMPVFTLLSDLGTQARTAF FGVDHRKAGRLAAWSIARLARRPGPVVVMVGSHRYLGHEETEIAFAEFFRQSAPDFEVLPPIVSLEDAHMAKEGVLDLLG RRPDLAGIYIACSGFSGAIAALREQAEPGRAITISNELTIETRAGLESGVLDVVLGTPIDQIAHDLIGWMTGSRPESEPA RRNLYPITMHVVENI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36701; Mature: 36570
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: PS00356 HTH_LACI_1 ; PS50932 HTH_LACI_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRLRIADVAERAGVGIATVDRVLNRRAPVRDETMQKVLAAAEALGYHNTSLLRRRMEET CCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHC RPPKRLGVLLQRRSEPFYQGFAGLLTQAARSGRARMRIEFCPDLAPATVSDRITDLAEGC CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCC DVIAVVAADHPRISATVEALATRMPVFTLLSDLGTQARTAFFGVDHRKAGRLAAWSIARL CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCHHHHHHHHH ARRPGPVVVMVGSHRYLGHEETEIAFAEFFRQSAPDFEVLPPIVSLEDAHMAKEGVLDLL HHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHHHH GRRPDLAGIYIACSGFSGAIAALREQAEPGRAITISNELTIETRAGLESGVLDVVLGTPI CCCCCCCEEEEEECCCHHHHHHHHHHCCCCCEEEECCCEEEEECCCCCCCCCCEEECCCH DQIAHDLIGWMTGSRPESEPARRNLYPITMHVVENI HHHHHHHHHHHCCCCCCCCHHHCCCCEEEHHHHHCC >Mature Secondary Structure GRLRIADVAERAGVGIATVDRVLNRRAPVRDETMQKVLAAAEALGYHNTSLLRRRMEET CCCCHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHC RPPKRLGVLLQRRSEPFYQGFAGLLTQAARSGRARMRIEFCPDLAPATVSDRITDLAEGC CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCC DVIAVVAADHPRISATVEALATRMPVFTLLSDLGTQARTAFFGVDHRKAGRLAAWSIARL CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCHHHHHHHHH ARRPGPVVVMVGSHRYLGHEETEIAFAEFFRQSAPDFEVLPPIVSLEDAHMAKEGVLDLL HHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHHHH GRRPDLAGIYIACSGFSGAIAALREQAEPGRAITISNELTIETRAGLESGVLDVVLGTPI CCCCCCCEEEEEECCCHHHHHHHHHHCCCCCEEEECCCEEEEECCCCCCCCCCEEECCCH DQIAHDLIGWMTGSRPESEPARRNLYPITMHVVENI HHHHHHHHHHHCCCCCCCCHHHCCCCEEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA