| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182679668
Identifier: 182679668
GI number: 182679668
Start: 3137927
End: 3139228
Strand: Reverse
Name: 182679668
Synonym: Bind_2753
Alternate gene names: NA
Gene position: 3139228-3137927 (Counterclockwise)
Preceding gene: 182679669
Following gene: 182679666
Centisome position: 75.28
GC content: 57.37
Gene sequence:
>1302_bases ATGGTCATGTCGCGCGTCTTGAAAAGCGTCATTGCGCTTTTATTTCTTGGCGGCTTGATCGCGGGAGGGATTTGGATCGC CCGATCCATCACATGGCCTCTAACGGTAGCGGTTCCTCCGCTTGGCGACACGACATCCAAGATGCTCCAGGCTTTGGGGC GGGAGGCCAGTCAATCGTCCCATTGGGTTCGGATGAAGCGGATTTCCGTCGCCGATATGCCGGCCGCGGCTGCGGCTCTC CAGGATGGCAAGGTCGATCTCGCGATCTTACGCACCGATGTCGGATTGCCATCCAAGGCCCAGACCATTGCTATTCTGCG CACCTATCAGGTCTTTCTGATCATCCCGCCGAATTCCTCGATCGAAAGTTTCAGTAATCTTCGCAACAGGACAATCGGGT TCCTGCCGGGTCCGCCGGAGGATCAGGCTCTTCTCGATAAAATTCTCACCTACAACAATATTCCGACCACGTCCGTAAAC AGGCTCCAGCTCACACCTGCTGAGGCCGGTGTGGCGCTGGGGCAAAAGAAAATCGCCGCCATCTATGTTGTCGGTATCCC CGGTATCGGGATTTCGAGCGAGGCTTATGCCGCCGCCGCCAAGGCGACAAAAGGCACGCCGCAGATCATCGGTGTGGATG AAGCTGACGCCATGGTGAAACATTTTGGCGGTCTTCAAAAGGTGGATATAGACGCAGGCTCATTTGGCGGCGTTAAGGCT CAACCCGAGGAAGACACGGCCACGCTCGCCGTCACATTGCGTCTCGTCGCCAAACAAAGCATGTCGAATTATGTCGTAGG GGAGGTGGCCCGCAAACTCCTCGAGGCAAAAACGCGTCTGGCCTCGACAGAACCCTCGGTGATGGGAATAGAGGCGCCTG ACACGGACGATACCCAATTTGCGATTCATCCGGGAGCGAAAGCCTATTTCGATGGGGATGCGCCGAGCCTGTTCGATCGT TTTGAAAGCCTGTTCTGGATCGGCTCCGCGGCCTTGGGTATCCTGGGCTCCGGCCTCACCTGGCTGTGGAGCCGGATCAG GGGACCACGGCAGGACATGGAGCCGGTCGGTGATCGCCTGGCGAGCTTCCTCAAAAGGGTCCGCCAAGCTGACGAACGGG CATTGGCGGAACTCGAGGATGAATTGGATTCCATCGTGTTACAGTTGATCGAGGCGCGATCGGAGGGGACCATCGAAGGT GATGACATTAATACTTATGCGATCGCCGTGCTGCATGGCCGCGCGGCGATCGCGGAGCGTTTGGCCTTCCTGAGGCAGCA ACAAGGTCAAGGAATGGAATAA
Upstream 100 bases:
>100_bases TTAGAACGCTTTCGAATTTTTGCTATGCCTTTGGGAACGCGAAAATTCGAGAAAGGAGCCAAGAGGCGCTGATGGCGTCT CTTGGCAGGAAGCCGGAGAA
Downstream 100 bases:
>100_bases AAAAGCAGCGCGTGATTTCAGAAGCGCGTGCTTCTTTCCAATCGCGGCGGCGAATACGATTGATGCCTATCCTCCGAATC GGCGGAAGAAATCCCAGATA
Product: hypothetical protein
Products: NA
Alternate protein names: TRAP Transporter Solute Receptor TAXI Family; TAXI Family TRAP Transporter Solute Receptor; Transmembrane Component; Transport System Periplasmic Component; Signal Peptide; Trap Transporter Solute Receptor Taxi Family; TRAP-Type Transport System
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MVMSRVLKSVIALLFLGGLIAGGIWIARSITWPLTVAVPPLGDTTSKMLQALGREASQSSHWVRMKRISVADMPAAAAAL QDGKVDLAILRTDVGLPSKAQTIAILRTYQVFLIIPPNSSIESFSNLRNRTIGFLPGPPEDQALLDKILTYNNIPTTSVN RLQLTPAEAGVALGQKKIAAIYVVGIPGIGISSEAYAAAAKATKGTPQIIGVDEADAMVKHFGGLQKVDIDAGSFGGVKA QPEEDTATLAVTLRLVAKQSMSNYVVGEVARKLLEAKTRLASTEPSVMGIEAPDTDDTQFAIHPGAKAYFDGDAPSLFDR FESLFWIGSAALGILGSGLTWLWSRIRGPRQDMEPVGDRLASFLKRVRQADERALAELEDELDSIVLQLIEARSEGTIEG DDINTYAIAVLHGRAAIAERLAFLRQQQGQGME
Sequences:
>Translated_433_residues MVMSRVLKSVIALLFLGGLIAGGIWIARSITWPLTVAVPPLGDTTSKMLQALGREASQSSHWVRMKRISVADMPAAAAAL QDGKVDLAILRTDVGLPSKAQTIAILRTYQVFLIIPPNSSIESFSNLRNRTIGFLPGPPEDQALLDKILTYNNIPTTSVN RLQLTPAEAGVALGQKKIAAIYVVGIPGIGISSEAYAAAAKATKGTPQIIGVDEADAMVKHFGGLQKVDIDAGSFGGVKA QPEEDTATLAVTLRLVAKQSMSNYVVGEVARKLLEAKTRLASTEPSVMGIEAPDTDDTQFAIHPGAKAYFDGDAPSLFDR FESLFWIGSAALGILGSGLTWLWSRIRGPRQDMEPVGDRLASFLKRVRQADERALAELEDELDSIVLQLIEARSEGTIEG DDINTYAIAVLHGRAAIAERLAFLRQQQGQGME >Mature_433_residues MVMSRVLKSVIALLFLGGLIAGGIWIARSITWPLTVAVPPLGDTTSKMLQALGREASQSSHWVRMKRISVADMPAAAAAL QDGKVDLAILRTDVGLPSKAQTIAILRTYQVFLIIPPNSSIESFSNLRNRTIGFLPGPPEDQALLDKILTYNNIPTTSVN RLQLTPAEAGVALGQKKIAAIYVVGIPGIGISSEAYAAAAKATKGTPQIIGVDEADAMVKHFGGLQKVDIDAGSFGGVKA QPEEDTATLAVTLRLVAKQSMSNYVVGEVARKLLEAKTRLASTEPSVMGIEAPDTDDTQFAIHPGAKAYFDGDAPSLFDR FESLFWIGSAALGILGSGLTWLWSRIRGPRQDMEPVGDRLASFLKRVRQADERALAELEDELDSIVLQLIEARSEGTIEG DDINTYAIAVLHGRAAIAERLAFLRQQQGQGME
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46426; Mature: 46426
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMSRVLKSVIALLFLGGLIAGGIWIARSITWPLTVAVPPLGDTTSKMLQALGREASQSS CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCC HWVRMKRISVADMPAAAAALQDGKVDLAILRTDVGLPSKAQTIAILRTYQVFLIIPPNSS CEEEEECCCHHCCCHHHHHHCCCCEEEEEEEECCCCCCCHHHEEEEEEEEEEEEECCCCC IESFSNLRNRTIGFLPGPPEDQALLDKILTYNNIPTTSVNRLQLTPAEAGVALGQKKIAA HHHHHHHHHCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHCCCEEEE IYVVGIPGIGISSEAYAAAAKATKGTPQIIGVDEADAMVKHFGGLQKVDIDAGSFGGVKA EEEEECCCCCCCCHHHHHHHHCCCCCCCEEECCHHHHHHHHHCCCEEEECCCCCCCCCCC QPEEDTATLAVTLRLVAKQSMSNYVVGEVARKLLEAKTRLASTEPSVMGIEAPDTDDTQF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEE AIHPGAKAYFDGDAPSLFDRFESLFWIGSAALGILGSGLTWLWSRIRGPRQDMEPVGDRL EECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHH ASFLKRVRQADERALAELEDELDSIVLQLIEARSEGTIEGDDINTYAIAVLHGRAAIAER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHHHHHHHH LAFLRQQQGQGME HHHHHHHCCCCCC >Mature Secondary Structure MVMSRVLKSVIALLFLGGLIAGGIWIARSITWPLTVAVPPLGDTTSKMLQALGREASQSS CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCC HWVRMKRISVADMPAAAAALQDGKVDLAILRTDVGLPSKAQTIAILRTYQVFLIIPPNSS CEEEEECCCHHCCCHHHHHHCCCCEEEEEEEECCCCCCCHHHEEEEEEEEEEEEECCCCC IESFSNLRNRTIGFLPGPPEDQALLDKILTYNNIPTTSVNRLQLTPAEAGVALGQKKIAA HHHHHHHHHCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHCCCEEEE IYVVGIPGIGISSEAYAAAAKATKGTPQIIGVDEADAMVKHFGGLQKVDIDAGSFGGVKA EEEEECCCCCCCCHHHHHHHHCCCCCCCEEECCHHHHHHHHHCCCEEEECCCCCCCCCCC QPEEDTATLAVTLRLVAKQSMSNYVVGEVARKLLEAKTRLASTEPSVMGIEAPDTDDTQF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEE AIHPGAKAYFDGDAPSLFDRFESLFWIGSAALGILGSGLTWLWSRIRGPRQDMEPVGDRL EECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHH ASFLKRVRQADERALAELEDELDSIVLQLIEARSEGTIEGDDINTYAIAVLHGRAAIAER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHHHHHHHH LAFLRQQQGQGME HHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA