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The map label for this gene is sdhC [H]

Identifier: 182679666

GI number: 182679666

Start: 3135991

End: 3136404

Strand: Reverse

Name: sdhC [H]

Synonym: Bind_2751

Alternate gene names: 182679666

Gene position: 3136404-3135991 (Counterclockwise)

Preceding gene: 182679668

Following gene: 182679665

Centisome position: 75.21

GC content: 54.83

Gene sequence:

>414_bases
ATGGCCGAAATCAATCTAGGTCCTGGCAGGGTGGGAAACCAACGGCCGTTATCCCCGCATTTGCTGATCTATCGGCCCAT
GCTCACCATGATGATGTCGATTGTGCATCGCATCACGGGCGCGGCGCTCTATTTGGGAACCTTGCTCCTGGCCTGGTACC
TGATCGCTGCCGCATCGGGACCTGAGGCCTTTGCGACAGCCTCGATCTTCTTCAATTCCATTCTCGGAAAATTGATCCTC
CTGGGATTCACCTGGGCTCTGTTTCATCATTTCCTTGGTGGTGTCAGGCACATGATCTGGGATGCCGGCTATGGTTTCGA
TGCCGCTGGGCGCGAGTTTCTGGCGCAGGCGACCTTAATCGGCGGGATTCTCCTGACCCTGTTCGTTTGGATTTTGGCTT
ATTTTATCGGCTAG

Upstream 100 bases:

>100_bases
GGGGAGCCGTCTGTCGCCATGAGGCGGGAGGCTAAAGAGACTCAACGGCGCGGTCAGCGTTGATGTGGAAGTCTTTTTAC
GAAAGAAGTGAGCGAAGCCC

Downstream 100 bases:

>100_bases
CCCCTTCGTTTCCAGCAGCTGGTCGTGATGCGGAAATTGGGTAGGGATCGGATACGGGCTGATTCCTGCTCCCGCACCTG
TGCTGGATTGGCGAATCACA

Product: succinate dehydrogenase, cytochrome b556 subunit

Products: fumarate; reduced acceptor

Alternate protein names: Cytochrome b-556 [H]

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MAEINLGPGRVGNQRPLSPHLLIYRPMLTMMMSIVHRITGAALYLGTLLLAWYLIAAASGPEAFATASIFFNSILGKLIL
LGFTWALFHHFLGGVRHMIWDAGYGFDAAGREFLAQATLIGGILLTLFVWILAYFIG

Sequences:

>Translated_137_residues
MAEINLGPGRVGNQRPLSPHLLIYRPMLTMMMSIVHRITGAALYLGTLLLAWYLIAAASGPEAFATASIFFNSILGKLIL
LGFTWALFHHFLGGVRHMIWDAGYGFDAAGREFLAQATLIGGILLTLFVWILAYFIG
>Mature_136_residues
AEINLGPGRVGNQRPLSPHLLIYRPMLTMMMSIVHRITGAALYLGTLLLAWYLIAAASGPEAFATASIFFNSILGKLILL
GFTWALFHHFLGGVRHMIWDAGYGFDAAGREFLAQATLIGGILLTLFVWILAYFIG

Specific function: Membrane-anchoring subunit of succinate dehydrogenase (SDH) [H]

COG id: COG2009

COG function: function code C; Succinate dehydrogenase/fumarate reductase, cytochrome b subunit

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b560 family [H]

Homologues:

Organism=Escherichia coli, GI1786940, Length=128, Percent_Identity=32.8125, Blast_Score=67, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018495
- InterPro:   IPR014314
- InterPro:   IPR014361
- InterPro:   IPR000701 [H]

Pfam domain/function: PF01127 Sdh_cyt [H]

EC number: 1.3.99.1

Molecular weight: Translated: 15025; Mature: 14894

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS01000 SDH_CYT_1 ; PS01001 SDH_CYT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEINLGPGRVGNQRPLSPHLLIYRPMLTMMMSIVHRITGAALYLGTLLLAWYLIAAASG
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PEAFATASIFFNSILGKLILLGFTWALFHHFLGGVRHMIWDAGYGFDAAGREFLAQATLI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
GGILLTLFVWILAYFIG
HHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
AEINLGPGRVGNQRPLSPHLLIYRPMLTMMMSIVHRITGAALYLGTLLLAWYLIAAASG
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PEAFATASIFFNSILGKLILLGFTWALFHHFLGGVRHMIWDAGYGFDAAGREFLAQATLI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
GGILLTLFVWILAYFIG
HHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA