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The map label for this gene is scpA [H]

Identifier: 182679623

GI number: 182679623

Start: 3084761

End: 3085603

Strand: Reverse

Name: scpA [H]

Synonym: Bind_2708

Alternate gene names: 182679623

Gene position: 3085603-3084761 (Counterclockwise)

Preceding gene: 182679624

Following gene: 182679622

Centisome position: 73.99

GC content: 60.85

Gene sequence:

>843_bases
TTGGCACAGGATGAATTCGAGGACGTGCCGGCAGAAGGAGAGGGCACCGCCGCCGGTGTATCCGCCCTCATGGAGACCTC
CTTCATCGTCGAGCTTGAAGGGTTCGAGGGGCCGCTCGATCTCCTTCTCGATCTGGCGCGGCGCCAGAAGGTCGATCTGC
ACAAAATTTCAGTCCTGGCGCTCGTCGAGCAATATCTCGCCTTTATCGAGGAAGCGCGCAGTCTGCGTCTGGAACTCGCT
GCCGATTATCTCGTCATGGCGGCGTGGCTTGCATACTTGAAGTCCCGCCTTCTTTTACCCCAGGCCAATGAGAATGAGGA
ACCGGTAGCGGAGGAAGTCGCGCGTCTTTTGGCGGCGCGTCTTGTCCGGCTCGAAGCCTTGCGCGCCGCTGCCAGTGAAC
TCGTTGGCCGGCCGCGTCTTGGTCGCGACACGGTTTTGCGCGGCAATCCGGAAAAGATCGAAAAGGTGATGACTCCGCAA
TGGGAGACGAGCCTCCAGGAATTGCTCGAAATCTATGCGAGCCGTAGGGCGCGCCGCCCATTTCCGCGCAAGCATGAAAA
GGGGCCGAGCGTTGTGACCTTGAAGCAGCGCACGGTCTGGTCGCTGACACAGGCGCGCGCGGAACTGGAACGTCTGATTG
GCGCGGTGGCGGACTGGAGTCCGCTCGATGCCTATTTACTGCATTATTGCACGACGCCGGAAATGCGGCGCACGGTGCGC
GCCTCATCCTTGTCGGCCATGTTGGAAATGGCGCGGGAGGGCTTGGTCGCGCTCCGCCAGGATGAGCCTTTCGCTCCCTT
ATGGGTCAAGAGCATTGCAGCGGACAAAGGCAAGGCGTCCTGA

Upstream 100 bases:

>100_bases
CAGCCATTAGCCATGAATCCGAAAAACTGCTAATGTGATTCGCCTGATCGAACGTTTCGTTTCGAGACATTATCGGTGCG
CGATCAAGGGAGCGGTGGGC

Downstream 100 bases:

>100_bases
AGATCGCCTTGCCTCTTTTTGACTCATTGATCTCGATGAACGGAAAAGGAGGTTTCTTGTCGGACATCACAGAGCTTTTG
CCCGAAGCGGCGGCGGCGGG

Product: chromosome segregation and condensation protein ScpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MAQDEFEDVPAEGEGTAAGVSALMETSFIVELEGFEGPLDLLLDLARRQKVDLHKISVLALVEQYLAFIEEARSLRLELA
ADYLVMAAWLAYLKSRLLLPQANENEEPVAEEVARLLAARLVRLEALRAAASELVGRPRLGRDTVLRGNPEKIEKVMTPQ
WETSLQELLEIYASRRARRPFPRKHEKGPSVVTLKQRTVWSLTQARAELERLIGAVADWSPLDAYLLHYCTTPEMRRTVR
ASSLSAMLEMAREGLVALRQDEPFAPLWVKSIAADKGKAS

Sequences:

>Translated_280_residues
MAQDEFEDVPAEGEGTAAGVSALMETSFIVELEGFEGPLDLLLDLARRQKVDLHKISVLALVEQYLAFIEEARSLRLELA
ADYLVMAAWLAYLKSRLLLPQANENEEPVAEEVARLLAARLVRLEALRAAASELVGRPRLGRDTVLRGNPEKIEKVMTPQ
WETSLQELLEIYASRRARRPFPRKHEKGPSVVTLKQRTVWSLTQARAELERLIGAVADWSPLDAYLLHYCTTPEMRRTVR
ASSLSAMLEMAREGLVALRQDEPFAPLWVKSIAADKGKAS
>Mature_279_residues
AQDEFEDVPAEGEGTAAGVSALMETSFIVELEGFEGPLDLLLDLARRQKVDLHKISVLALVEQYLAFIEEARSLRLELAA
DYLVMAAWLAYLKSRLLLPQANENEEPVAEEVARLLAARLVRLEALRAAASELVGRPRLGRDTVLRGNPEKIEKVMTPQW
ETSLQELLEIYASRRARRPFPRKHEKGPSVVTLKQRTVWSLTQARAELERLIGAVADWSPLDAYLLHYCTTPEMRRTVRA
SSLSAMLEMAREGLVALRQDEPFAPLWVKSIAADKGKAS

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 31371; Mature: 31239

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQDEFEDVPAEGEGTAAGVSALMETSFIVELEGFEGPLDLLLDLARRQKVDLHKISVLA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHH
LVEQYLAFIEEARSLRLELAADYLVMAAWLAYLKSRLLLPQANENEEPVAEEVARLLAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
LVRLEALRAAASELVGRPRLGRDTVLRGNPEKIEKVMTPQWETSLQELLEIYASRRARRP
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
FPRKHEKGPSVVTLKQRTVWSLTQARAELERLIGAVADWSPLDAYLLHYCTTPEMRRTVR
CCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHH
ASSLSAMLEMAREGLVALRQDEPFAPLWVKSIAADKGKAS
HHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AQDEFEDVPAEGEGTAAGVSALMETSFIVELEGFEGPLDLLLDLARRQKVDLHKISVLA
CCCCCCCCCCCCCCHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHH
LVEQYLAFIEEARSLRLELAADYLVMAAWLAYLKSRLLLPQANENEEPVAEEVARLLAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
LVRLEALRAAASELVGRPRLGRDTVLRGNPEKIEKVMTPQWETSLQELLEIYASRRARRP
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
FPRKHEKGPSVVTLKQRTVWSLTQARAELERLIGAVADWSPLDAYLLHYCTTPEMRRTVR
CCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHH
ASSLSAMLEMAREGLVALRQDEPFAPLWVKSIAADKGKAS
HHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]