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The map label for this gene is scpB [H]

Identifier: 182679622

GI number: 182679622

Start: 3083946

End: 3084704

Strand: Reverse

Name: scpB [H]

Synonym: Bind_2707

Alternate gene names: 182679622

Gene position: 3084704-3083946 (Counterclockwise)

Preceding gene: 182679623

Following gene: 182679620

Centisome position: 73.97

GC content: 60.47

Gene sequence:

>759_bases
TTGTCGGACATCACAGAGCTTTTGCCCGAAGCGGCGGCGGCGGGCCTCGATGAAGACAAACAGTTAAACCCCGCTTTGAT
CGAGGCGGTGAGGATTGCGGAGGCCCTGTTGTTTGCGGCGGGCCAGCCCTTGTCGGATAGCGACATTGCGCGGCGCTTAC
CGAAAACGGTCGAAGTCCGCGACGTCATTGCGTGCTTGCAGGCCGATTATGCCCATCGCGGCGTCCATCTCGTGCAGGCG
GGTGGCAAATGGCTGTTTCGCACGGCAACGGATCTTGGGTTCTTGTTGACGGATACCGAGACGGATATCCGGAAATTGTC
GCGCGCTGCGCTCGAAACGCTCGCGATCGTTGCTTATCAGCAGCCGATCACGCGCGGTGAAATCGAGGAAACCCGGGGCG
TGAGCCTCTCCAAGGGAACGCTCGATGTGCTCATTGAAACCGGTTGGGTCTATCTGCGCGGGCGCAGGCGCAGCCCAGGA
CGGCCGATGACTTATGGCACGACCGAGGCCTTTTTGCTGGAATTCGGCCTTGCGAGTCTCTCCGATCTTCCCTCTCTCAA
GGAATTGAAGAAGACCCTGGTTGCTAAGGGCGCCCTCAAGGGTGCGCGCCAGCGGGATGATGAGGAAGAAGATCTCGTCG
AGACGGATGCGCCGGAACAGGATTTCGGCGAACTGCCCTCCGAAGTGATTACGCGCAAGCGGCGTGGTTCCCGCTCAGCG
CAGGCGATGGAAAGCAAGGGCGAACCGAGCACTCCCTGA

Upstream 100 bases:

>100_bases
TATGGGTCAAGAGCATTGCAGCGGACAAAGGCAAGGCGTCCTGAAGATCGCCTTGCCTCTTTTTGACTCATTGATCTCGA
TGAACGGAAAAGGAGGTTTC

Downstream 100 bases:

>100_bases
AGAAAACGGTGGCTTGCGAGGGGCAAGCCGCCGTTTTAAAGGGTCAACTCTTTTTCTTGGCGTTGATTTCCGTCCCGCTG
AAGTTCGAAAGATCGCCTTC

Product: segregation and condensation protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MSDITELLPEAAAAGLDEDKQLNPALIEAVRIAEALLFAAGQPLSDSDIARRLPKTVEVRDVIACLQADYAHRGVHLVQA
GGKWLFRTATDLGFLLTDTETDIRKLSRAALETLAIVAYQQPITRGEIEETRGVSLSKGTLDVLIETGWVYLRGRRRSPG
RPMTYGTTEAFLLEFGLASLSDLPSLKELKKTLVAKGALKGARQRDDEEEDLVETDAPEQDFGELPSEVITRKRRGSRSA
QAMESKGEPSTP

Sequences:

>Translated_252_residues
MSDITELLPEAAAAGLDEDKQLNPALIEAVRIAEALLFAAGQPLSDSDIARRLPKTVEVRDVIACLQADYAHRGVHLVQA
GGKWLFRTATDLGFLLTDTETDIRKLSRAALETLAIVAYQQPITRGEIEETRGVSLSKGTLDVLIETGWVYLRGRRRSPG
RPMTYGTTEAFLLEFGLASLSDLPSLKELKKTLVAKGALKGARQRDDEEEDLVETDAPEQDFGELPSEVITRKRRGSRSA
QAMESKGEPSTP
>Mature_251_residues
SDITELLPEAAAAGLDEDKQLNPALIEAVRIAEALLFAAGQPLSDSDIARRLPKTVEVRDVIACLQADYAHRGVHLVQAG
GKWLFRTATDLGFLLTDTETDIRKLSRAALETLAIVAYQQPITRGEIEETRGVSLSKGTLDVLIETGWVYLRGRRRSPGR
PMTYGTTEAFLLEFGLASLSDLPSLKELKKTLVAKGALKGARQRDDEEEDLVETDAPEQDFGELPSEVITRKRRGSRSAQ
AMESKGEPSTP

Specific function: May participate in chromosomal partitioning during cell division (Potential) [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 27573; Mature: 27441

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDITELLPEAAAAGLDEDKQLNPALIEAVRIAEALLFAAGQPLSDSDIARRLPKTVEVR
CCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHH
DVIACLQADYAHRGVHLVQAGGKWLFRTATDLGFLLTDTETDIRKLSRAALETLAIVAYQ
HHHHHHHHHHHHCCEEEEECCCCEEEEEHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHH
QPITRGEIEETRGVSLSKGTLDVLIETGWVYLRGRRRSPGRPMTYGTTEAFLLEFGLASL
CCCCCCCHHHHCCCCCCCCHHEEHEECCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
SDLPSLKELKKTLVAKGALKGARQRDDEEEDLVETDAPEQDFGELPSEVITRKRRGSRSA
HCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHCCHHHHHHHHCCCHHH
QAMESKGEPSTP
HHHHHCCCCCCC
>Mature Secondary Structure 
SDITELLPEAAAAGLDEDKQLNPALIEAVRIAEALLFAAGQPLSDSDIARRLPKTVEVR
CHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHH
DVIACLQADYAHRGVHLVQAGGKWLFRTATDLGFLLTDTETDIRKLSRAALETLAIVAYQ
HHHHHHHHHHHHCCEEEEECCCCEEEEEHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHH
QPITRGEIEETRGVSLSKGTLDVLIETGWVYLRGRRRSPGRPMTYGTTEAFLLEFGLASL
CCCCCCCHHHHCCCCCCCCHHEEHEECCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
SDLPSLKELKKTLVAKGALKGARQRDDEEEDLVETDAPEQDFGELPSEVITRKRRGSRSA
HCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHCCHHHHHHHHCCCHHH
QAMESKGEPSTP
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]