| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182679420
Identifier: 182679420
GI number: 182679420
Start: 2817621
End: 2818562
Strand: Reverse
Name: 182679420
Synonym: Bind_2469
Alternate gene names: NA
Gene position: 2818562-2817621 (Counterclockwise)
Preceding gene: 182679422
Following gene: 182679419
Centisome position: 67.59
GC content: 59.02
Gene sequence:
>942_bases ATGGCGGCTCTCACTATACGTCACACGACCAGCTTCACCTATAGACGGCCAGTGGCATTCGGTACGCACCACGTTATGGT TCGCCCACGCGACAGTGCTGATCAAAGCGTGCTCGAGGCGAACCTTCATATCTCGCCCGCCCCGTCTCAAATCCAATGGG CGAAGGATTCCTTTGGAAATCACGTCGCATCGGTCCAATTTCGCGGCAAGGCTGAACGATTGCGCTTTGAGAGCATTGTT CACGTCGAGCATGTGACGGAAGATTTCGCCGAACTCGAACCCGGCGTCAGGGATGCGCTCCCGCTCTCCTATACGGCCGG GGAGCGGGCCAAGCTGGATGTCTTCCTCCAATCCCAATATGCCGATGCGGACGGAGCTCTCTCGCACTGGGTAGGGCACT TTCTCGCTGAGCAAAGGCCAGCGGGTCTTCAAGACCTCCTTATCAAAATGACCGCCGCGATCAAGACTGGTTTCACTTAT GCGGCTCGGGAAGCCAAAGGCATCCAGACGCCGGCGCAAACGCTTGCGCTGCGGAGCGGTAGTTGCCGCGACTTTGCCGT GCTTATGATTGAAGCCCTCAAAACGCTTGGCGTTGCTGCCCGCTTCGTCTCTGGCTATGTCCATGTCCGGTATGATCCGA ACGAGCGCCGCAGCGCCGGTTCGACCCATGCTTGGCTTCAGGCCTATGTGCCCGGCCGTGGCTGGGTTGACTTTGATCCG ACGAATGGCATTACGGGCAATCGTGATCTCATCCGCGTCGCGGTCGTCCACGACCCGCACGATGCGGTGCCTCTCCATGG CACCTGGATTGGCGAGTCCACGGATGCCATCGGCATGGACGTCGAAGTGAGCGTTACGCCCACCGAGCGACAGGTTTTTG CCGAAGCGGACAACTATTCCCATCAGCCCATGCGGGAGTCCGCTTTGCTGATGACGGCATAG
Upstream 100 bases:
>100_bases TCAATTTGAAGGCGCCTCGCGGGACCTGAGCGATAGGCGTCCGTTTTGCTATCCTCTGGCGTGAATCCTGCTTGATCGAG AGTCAAACCATGGGGTTACG
Downstream 100 bases:
>100_bases CGCGAGGCCGTTAGGGAGAACGAAAGACGCGGCCCTGACCGGCTGGAAGCCTACACAGGATAAGAAGATATCGGGAGTCA TCGAAGGGCTTTTTTGGCCT
Product: transglutaminase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MAALTIRHTTSFTYRRPVAFGTHHVMVRPRDSADQSVLEANLHISPAPSQIQWAKDSFGNHVASVQFRGKAERLRFESIV HVEHVTEDFAELEPGVRDALPLSYTAGERAKLDVFLQSQYADADGALSHWVGHFLAEQRPAGLQDLLIKMTAAIKTGFTY AAREAKGIQTPAQTLALRSGSCRDFAVLMIEALKTLGVAARFVSGYVHVRYDPNERRSAGSTHAWLQAYVPGRGWVDFDP TNGITGNRDLIRVAVVHDPHDAVPLHGTWIGESTDAIGMDVEVSVTPTERQVFAEADNYSHQPMRESALLMTA
Sequences:
>Translated_313_residues MAALTIRHTTSFTYRRPVAFGTHHVMVRPRDSADQSVLEANLHISPAPSQIQWAKDSFGNHVASVQFRGKAERLRFESIV HVEHVTEDFAELEPGVRDALPLSYTAGERAKLDVFLQSQYADADGALSHWVGHFLAEQRPAGLQDLLIKMTAAIKTGFTY AAREAKGIQTPAQTLALRSGSCRDFAVLMIEALKTLGVAARFVSGYVHVRYDPNERRSAGSTHAWLQAYVPGRGWVDFDP TNGITGNRDLIRVAVVHDPHDAVPLHGTWIGESTDAIGMDVEVSVTPTERQVFAEADNYSHQPMRESALLMTA >Mature_312_residues AALTIRHTTSFTYRRPVAFGTHHVMVRPRDSADQSVLEANLHISPAPSQIQWAKDSFGNHVASVQFRGKAERLRFESIVH VEHVTEDFAELEPGVRDALPLSYTAGERAKLDVFLQSQYADADGALSHWVGHFLAEQRPAGLQDLLIKMTAAIKTGFTYA AREAKGIQTPAQTLALRSGSCRDFAVLMIEALKTLGVAARFVSGYVHVRYDPNERRSAGSTHAWLQAYVPGRGWVDFDPT NGITGNRDLIRVAVVHDPHDAVPLHGTWIGESTDAIGMDVEVSVTPTERQVFAEADNYSHQPMRESALLMTA
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.leprae ML0607 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013589 - InterPro: IPR002931 [H]
Pfam domain/function: PF08379 Bact_transglu_N; PF01841 Transglut_core [H]
EC number: NA
Molecular weight: Translated: 34510; Mature: 34379
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALTIRHTTSFTYRRPVAFGTHHVMVRPRDSADQSVLEANLHISPAPSQIQWAKDSFGN CCEEEEEECCCEEEECCEEECCEEEEEECCCCCCHHHHEECEEECCCCCCEEEHHHHCCC HVASVQFRGKAERLRFESIVHVEHVTEDFAELEPGVRDALPLSYTAGERAKLDVFLQSQY EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCEECCCCCEEEEEEEECCC ADADGALSHWVGHFLAEQRPAGLQDLLIKMTAAIKTGFTYAAREAKGIQTPAQTLALRSG CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHCCCC SCRDFAVLMIEALKTLGVAARFVSGYVHVRYDPNERRSAGSTHAWLQAYVPGRGWVDFDP CCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHCCCCCCEEEEEEECCCCCEEECC TNGITGNRDLIRVAVVHDPHDAVPLHGTWIGESTDAIGMDVEVSVTPTERQVFAEADNYS CCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEEECCCHHHEEEECCCCC HQPMRESALLMTA CCCHHHCEEEECC >Mature Secondary Structure AALTIRHTTSFTYRRPVAFGTHHVMVRPRDSADQSVLEANLHISPAPSQIQWAKDSFGN CEEEEEECCCEEEECCEEECCEEEEEECCCCCCHHHHEECEEECCCCCCEEEHHHHCCC HVASVQFRGKAERLRFESIVHVEHVTEDFAELEPGVRDALPLSYTAGERAKLDVFLQSQY EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCEECCCCCEEEEEEEECCC ADADGALSHWVGHFLAEQRPAGLQDLLIKMTAAIKTGFTYAAREAKGIQTPAQTLALRSG CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHCCCC SCRDFAVLMIEALKTLGVAARFVSGYVHVRYDPNERRSAGSTHAWLQAYVPGRGWVDFDP CCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHCCCCCCEEEEEEECCCCCEEECC TNGITGNRDLIRVAVVHDPHDAVPLHGTWIGESTDAIGMDVEVSVTPTERQVFAEADNYS CCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEEECCCHHHEEEECCCCC HQPMRESALLMTA CCCHHHCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]