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The map label for this gene is 182679337

Identifier: 182679337

GI number: 182679337

Start: 2722330

End: 2724000

Strand: Reverse

Name: 182679337

Synonym: Bind_2383

Alternate gene names: NA

Gene position: 2724000-2722330 (Counterclockwise)

Preceding gene: 182679338

Following gene: 182679336

Centisome position: 65.32

GC content: 60.14

Gene sequence:

>1671_bases
ATGAGTGAGGTTGCGAACGAACTGGTCTTCGTGCCCCTGGGTGGTCTCGGCGAAATCGGGATGAATTTCGCCCTCTATGG
CTTCGGACCCAAAACCAAGCGCAAATGGATAGCGGTCGATTGCGGTCTTGCTTTCGCGGGGCCGGAACATTTCGGCATCG
ACCTCATCCTGCCCAATCCAGCCTTCATCGAGAAATTGCGTCAGGATCTGGTCGCGATCATCGTCACTCACGCCCATGAG
GATCATATCGGGGCGCTTCCCGATCTTTGGCCGCGCCTCGGTTGCCCTATCTATGCGACGCGTTTTGCGGCGAGCTTGCT
CGAGGCCAAGCGTTTGGCGGAGCCCGGCGCTCCAGATGTTCCCCTGCTGACTGTCGATCAGGGAGAGGTTTTGCGTCTCG
ATCCCTTCACGATCGAATTCATTCCCATGGCGCATTCCATCCCCGAAAGCTGCGCCCTGGCGATCCGCACGGAAGCCGGT
ACTCTGATTCATTCCGGCGATTGGAAGATCGATGCCGAGCCGGGTCTTGGCAAGGAGACCGATGCCAAGCGCCTGACCGA
GATCGGCGATGAAGGCGTTCTGGCTTTGATCTCCGATTCGACCAATATTCTGCGTGAAGGTATCAGCCCTTCGGAAGGCG
ATGTCGCGCGGGCATTGCGGGATATTATTTTGAATGCGACGGGCCGTGTTATCGTCACGACCTTTGCGTCCAATGTCGCG
CGTATCCGCGCGGTCGCCGAGGCCGCCATGGCCGCGCGGCGCAATGTCGTTCTGGTCGGGCGCGCCATGGAGCGGGTCGT
CGGCATTGCCCGCGATCTCGGCTATCTGGATGGCATTCCCCTGTTTCTCTCCATGGATGCCTATCCGCATCTGCCGCGTG
ACAAAGTCGTGGTTCTAGCCACCGGCAGCCAGGGTGAGAGCCGTGCGGCGATCGCGCGGATCGCCGAAGGCGAGCATCAG
ATCGTCAATCTGAGCCCTGGCGATCAAGTGATTTTCTCCTCCCGCACCATTCCCGGCAATGAGCGGGATGTCGGGCGGAT
CATCAATCAATTCATCCGTGCCGGTGTCGAGGTCATCACCGATCGTAATGCCCTCGTGCATGCCTCTGGACATCCAAGGC
GTGGCGAGGTGGAACAGCTCTATCGCTGGGTGCGGCCGAAAATCGCCGTCCCGGCTCATGGTGAGGAGATTCACCTTGCC
GAACATGCGCGTTTCGCACTGGAGCATGGGGCCGAGCAAGTGGTGCGCGCCCGTAATGGAGATCTCGTTGTTCTCGCGCC
GGGCCAGGCCGCGATTATCGGTGAGGTGCCTTCTGGTCGTCTCTACAAAGACGGCAACAGCCTGATCAAGGCCGATGACG
ATGCTTTGCGCGCGCGACAGAAGCTTGCTTTTTCAGGGATCGTGACCATCGGTATGGCGATTACCGCGAAGGGCGATCTG
GCCGGCGTGCCGGATGTGGTGATTGCTGGCATGCCGGGCCGGACCCAGGATGGCGCCGTGATCGATGCGGTTGTTGACGA
AGCTCTCTTTCAGACCTTTGATCATCTGCCGCGTCAGAAGCGACGCGATGCTGATCTTGTCTCCTCGGCGATTGAGAAGG
CCGTGCGCAATGCCGTCGCCGCGGCCTGGGGCAAGAAGCCCGCGGTCCATGTTCTGGTGATCGAAGTGTGA

Upstream 100 bases:

>100_bases
CCCCCTTGGTTGAATTCCATTCCTCAACTTCTCCCCGAAACGTCTCGTTCTCCCCGTCACGTTTTGATCTTTCTAGGCGT
GGAGAGGGAAGGTCTCCGCG

Downstream 100 bases:

>100_bases
GAATGACGCGGATCATGCTCGACTTCGAAGGTTGAGCTGACCTGCTAAAATGTTTAAACCTTCGCGGTGGATTTATTTTC
TCCTTGGCCACCTGATCAGG

Product: beta-lactamase domain-containing protein

Products: NA

Alternate protein names: RNase J [H]

Number of amino acids: Translated: 556; Mature: 555

Protein sequence:

>556_residues
MSEVANELVFVPLGGLGEIGMNFALYGFGPKTKRKWIAVDCGLAFAGPEHFGIDLILPNPAFIEKLRQDLVAIIVTHAHE
DHIGALPDLWPRLGCPIYATRFAASLLEAKRLAEPGAPDVPLLTVDQGEVLRLDPFTIEFIPMAHSIPESCALAIRTEAG
TLIHSGDWKIDAEPGLGKETDAKRLTEIGDEGVLALISDSTNILREGISPSEGDVARALRDIILNATGRVIVTTFASNVA
RIRAVAEAAMAARRNVVLVGRAMERVVGIARDLGYLDGIPLFLSMDAYPHLPRDKVVVLATGSQGESRAAIARIAEGEHQ
IVNLSPGDQVIFSSRTIPGNERDVGRIINQFIRAGVEVITDRNALVHASGHPRRGEVEQLYRWVRPKIAVPAHGEEIHLA
EHARFALEHGAEQVVRARNGDLVVLAPGQAAIIGEVPSGRLYKDGNSLIKADDDALRARQKLAFSGIVTIGMAITAKGDL
AGVPDVVIAGMPGRTQDGAVIDAVVDEALFQTFDHLPRQKRRDADLVSSAIEKAVRNAVAAAWGKKPAVHVLVIEV

Sequences:

>Translated_556_residues
MSEVANELVFVPLGGLGEIGMNFALYGFGPKTKRKWIAVDCGLAFAGPEHFGIDLILPNPAFIEKLRQDLVAIIVTHAHE
DHIGALPDLWPRLGCPIYATRFAASLLEAKRLAEPGAPDVPLLTVDQGEVLRLDPFTIEFIPMAHSIPESCALAIRTEAG
TLIHSGDWKIDAEPGLGKETDAKRLTEIGDEGVLALISDSTNILREGISPSEGDVARALRDIILNATGRVIVTTFASNVA
RIRAVAEAAMAARRNVVLVGRAMERVVGIARDLGYLDGIPLFLSMDAYPHLPRDKVVVLATGSQGESRAAIARIAEGEHQ
IVNLSPGDQVIFSSRTIPGNERDVGRIINQFIRAGVEVITDRNALVHASGHPRRGEVEQLYRWVRPKIAVPAHGEEIHLA
EHARFALEHGAEQVVRARNGDLVVLAPGQAAIIGEVPSGRLYKDGNSLIKADDDALRARQKLAFSGIVTIGMAITAKGDL
AGVPDVVIAGMPGRTQDGAVIDAVVDEALFQTFDHLPRQKRRDADLVSSAIEKAVRNAVAAAWGKKPAVHVLVIEV
>Mature_555_residues
SEVANELVFVPLGGLGEIGMNFALYGFGPKTKRKWIAVDCGLAFAGPEHFGIDLILPNPAFIEKLRQDLVAIIVTHAHED
HIGALPDLWPRLGCPIYATRFAASLLEAKRLAEPGAPDVPLLTVDQGEVLRLDPFTIEFIPMAHSIPESCALAIRTEAGT
LIHSGDWKIDAEPGLGKETDAKRLTEIGDEGVLALISDSTNILREGISPSEGDVARALRDIILNATGRVIVTTFASNVAR
IRAVAEAAMAARRNVVLVGRAMERVVGIARDLGYLDGIPLFLSMDAYPHLPRDKVVVLATGSQGESRAAIARIAEGEHQI
VNLSPGDQVIFSSRTIPGNERDVGRIINQFIRAGVEVITDRNALVHASGHPRRGEVEQLYRWVRPKIAVPAHGEEIHLAE
HARFALEHGAEQVVRARNGDLVVLAPGQAAIIGEVPSGRLYKDGNSLIKADDDALRARQKLAFSGIVTIGMAITAKGDLA
GVPDVVIAGMPGRTQDGAVIDAVVDEALFQTFDHLPRQKRRDADLVSSAIEKAVRNAVAAAWGKKPAVHVLVIEV

Specific function: Unknown

COG id: COG0595

COG function: function code R; Predicted hydrolase of the metallo-beta-lactamase superfamily

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family. RNase J subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR011108
- InterPro:   IPR001587 [H]

Pfam domain/function: PF00753 Lactamase_B; PF07521 RMMBL [H]

EC number: NA

Molecular weight: Translated: 59715; Mature: 59584

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEVANELVFVPLGGLGEIGMNFALYGFGPKTKRKWIAVDCGLAFAGPEHFGIDLILPNP
CCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEECCEEECCCCCCCEEEEECCH
AFIEKLRQDLVAIIVTHAHEDHIGALPDLWPRLGCPIYATRFAASLLEAKRLAEPGAPDV
HHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCC
PLLTVDQGEVLRLDPFTIEFIPMAHSIPESCALAIRTEAGTLIHSGDWKIDAEPGLGKET
CEEEECCCCEEEECCCEEEEEECCCCCCCHHEEEEEECCCEEEECCCEEEECCCCCCCCC
DAKRLTEIGDEGVLALISDSTNILREGISPSEGDVARALRDIILNATGRVIVTTFASNVA
HHHHHHHCCCCCEEEEEECCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHH
RIRAVAEAAMAARRNVVLVGRAMERVVGIARDLGYLDGIPLFLSMDAYPHLPRDKVVVLA
HHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEE
TGSQGESRAAIARIAEGEHQIVNLSPGDQVIFSSRTIPGNERDVGRIINQFIRAGVEVIT
ECCCCCCHHHHHHHCCCCCEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHCCHHEEE
DRNALVHASGHPRRGEVEQLYRWVRPKIAVPAHGEEIHLAEHARFALEHGAEQVVRARNG
CCCEEEECCCCCCCCCHHHHHHHHCCCEECCCCCCEEEHHHHHHHHHHHHHHHHHHHCCC
DLVVLAPGQAAIIGEVPSGRLYKDGNSLIKADDDALRARQKLAFSGIVTIGMAITAKGDL
CEEEECCCCEEEEEECCCCCEEECCCCEEECCCHHHHHHHHHHHHHHEEEEEEEEECCCC
AGVPDVVIAGMPGRTQDGAVIDAVVDEALFQTFDHLPRQKRRDADLVSSAIEKAVRNAVA
CCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
AAWGKKPAVHVLVIEV
HHCCCCCCEEEEEEEC
>Mature Secondary Structure 
SEVANELVFVPLGGLGEIGMNFALYGFGPKTKRKWIAVDCGLAFAGPEHFGIDLILPNP
CCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEECCEEECCCCCCCEEEEECCH
AFIEKLRQDLVAIIVTHAHEDHIGALPDLWPRLGCPIYATRFAASLLEAKRLAEPGAPDV
HHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCC
PLLTVDQGEVLRLDPFTIEFIPMAHSIPESCALAIRTEAGTLIHSGDWKIDAEPGLGKET
CEEEECCCCEEEECCCEEEEEECCCCCCCHHEEEEEECCCEEEECCCEEEECCCCCCCCC
DAKRLTEIGDEGVLALISDSTNILREGISPSEGDVARALRDIILNATGRVIVTTFASNVA
HHHHHHHCCCCCEEEEEECCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHH
RIRAVAEAAMAARRNVVLVGRAMERVVGIARDLGYLDGIPLFLSMDAYPHLPRDKVVVLA
HHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEE
TGSQGESRAAIARIAEGEHQIVNLSPGDQVIFSSRTIPGNERDVGRIINQFIRAGVEVIT
ECCCCCCHHHHHHHCCCCCEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHCCHHEEE
DRNALVHASGHPRRGEVEQLYRWVRPKIAVPAHGEEIHLAEHARFALEHGAEQVVRARNG
CCCEEEECCCCCCCCCHHHHHHHHCCCEECCCCCCEEEHHHHHHHHHHHHHHHHHHHCCC
DLVVLAPGQAAIIGEVPSGRLYKDGNSLIKADDDALRARQKLAFSGIVTIGMAITAKGDL
CEEEECCCCEEEEEECCCCCEEECCCCEEECCCHHHHHHHHHHHHHHEEEEEEEEECCCC
AGVPDVVIAGMPGRTQDGAVIDAVVDEALFQTFDHLPRQKRRDADLVSSAIEKAVRNAVA
CCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
AAWGKKPAVHVLVIEV
HHCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12948626 [H]