| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182679298
Identifier: 182679298
GI number: 182679298
Start: 2679553
End: 2680038
Strand: Reverse
Name: 182679298
Synonym: Bind_2342
Alternate gene names: NA
Gene position: 2680038-2679553 (Counterclockwise)
Preceding gene: 182679299
Following gene: 182679297
Centisome position: 64.27
GC content: 59.26
Gene sequence:
>486_bases ATGACTGATGACGTGAAGCATTCGGAGGGACAGAAAATCCGCCTCCAGGAGTCACGTTTGCGCTTCAGCCGGTTTGGACC CAATGAAGCCTGGTCGGTTGGTACGCGCCTGCGCGCCGCCGCGATTGCCGCATCCGCCCCCGTGGCGATTGATGTATATG GCTATGGCCGCACGCTGTTCCATGTGGCGCTCGAAGGCTCCGTGCCCGATAATGCGGAATGGATTCGCCGCAAGCGCAAT ATCGTGCTTCGATTCTGGCGCAGTTCCTATTCGGTGCGCCTCGATTTGCTGGAAGCTGGCCTCACGTTGACAGAGCGTTA TGGGATTTCGGAGGTGGATTTCGCGGCCGCTGGGGGCAGCGTGCCCATTCTCCTCACGGATTCCGGCTGTATCGGCGCTG TGACCGTTTCCGGTCTGCCACAGCATGAGGATCATGCGATGGTCATGGCCGCGCTGGAGGCCGAATTAGGGCTTGAAAGT CTTTAA
Upstream 100 bases:
>100_bases AGGTCTCGGGTCGATTTTTTGTGAAGCGAAAGACGTTAACAAAAACGAGGAAGCGTGCCATCTCGGTAGCGTCAAAACAT CGCTAGACCGAGGAGGAAAC
Downstream 100 bases:
>100_bases GGCGTCGCTCTCTATTCTGAAAATGCATCAGATTGGTCCCAAAAGGGGGAGCCTCTTTTGGGTCTGACGCCCTCGACGGA TCTCGGCTCTCTCCTCACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MTDDVKHSEGQKIRLQESRLRFSRFGPNEAWSVGTRLRAAAIAASAPVAIDVYGYGRTLFHVALEGSVPDNAEWIRRKRN IVLRFWRSSYSVRLDLLEAGLTLTERYGISEVDFAAAGGSVPILLTDSGCIGAVTVSGLPQHEDHAMVMAALEAELGLES L
Sequences:
>Translated_161_residues MTDDVKHSEGQKIRLQESRLRFSRFGPNEAWSVGTRLRAAAIAASAPVAIDVYGYGRTLFHVALEGSVPDNAEWIRRKRN IVLRFWRSSYSVRLDLLEAGLTLTERYGISEVDFAAAGGSVPILLTDSGCIGAVTVSGLPQHEDHAMVMAALEAELGLES L >Mature_160_residues TDDVKHSEGQKIRLQESRLRFSRFGPNEAWSVGTRLRAAAIAASAPVAIDVYGYGRTLFHVALEGSVPDNAEWIRRKRNI VLRFWRSSYSVRLDLLEAGLTLTERYGISEVDFAAAGGSVPILLTDSGCIGAVTVSGLPQHEDHAMVMAALEAELGLESL
Specific function: Unknown
COG id: COG4702
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0303 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6319613, Length=141, Percent_Identity=34.7517730496454, Blast_Score=68, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005624 - InterPro: IPR010371 [H]
Pfam domain/function: PF03928 DUF336 [H]
EC number: NA
Molecular weight: Translated: 17571; Mature: 17440
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDDVKHSEGQKIRLQESRLRFSRFGPNEAWSVGTRLRAAAIAASAPVAIDVYGYGRTLF CCCCCCCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCEEE HVALEGSVPDNAEWIRRKRNIVLRFWRSSYSVRLDLLEAGLTLTERYGISEVDFAAAGGS EEEEECCCCCCHHHHHHHHHHEEEEECCCCEEEEEEECCCCEEEHHCCCCCCEEEECCCC VPILLTDSGCIGAVTVSGLPQHEDHAMVMAALEAELGLESL EEEEEECCCCEEEEEECCCCCCCCCHHHEEHHHHHCCCCCC >Mature Secondary Structure TDDVKHSEGQKIRLQESRLRFSRFGPNEAWSVGTRLRAAAIAASAPVAIDVYGYGRTLF CCCCCCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCEEE HVALEGSVPDNAEWIRRKRNIVLRFWRSSYSVRLDLLEAGLTLTERYGISEVDFAAAGGS EEEEECCCCCCHHHHHHHHHHEEEEECCCCEEEEEEECCCCEEEHHCCCCCCEEEECCCC VPILLTDSGCIGAVTVSGLPQHEDHAMVMAALEAELGLESL EEEEEECCCCEEEEEECCCCCCCCCHHHEEHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA