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The map label for this gene is ynfM [H]

Identifier: 182679258

GI number: 182679258

Start: 2633769

End: 2635115

Strand: Reverse

Name: ynfM [H]

Synonym: Bind_2302

Alternate gene names: 182679258

Gene position: 2635115-2633769 (Counterclockwise)

Preceding gene: 182679271

Following gene: 182679256

Centisome position: 63.19

GC content: 59.84

Gene sequence:

>1347_bases
ATGCATGATATCCCCAAGGCGGCGGTCGAGACGCCGAGCGAGACACCAAGTCTGACACAAAACCCGGAGGGGCCGGTCAA
AAGTGCGGGCTCGAGCGCGGTCAAGGGCGTGATCAAGGGTGCAGACATGGCCTCGACCCAGATCCGCCGAGGCACGGCGG
ATTATCGCCGGGTCAATTTGGCCCTCGTCGCGGCAGGCTTTTCAACCTTCGCCATCCTCTATTGCGTGCAGGCCTTGCTG
CCGATCTTCTCGCGGGATTTTGGCCTGAGTCCGGGAGCGGCGAGCCTTGCTCTTTCCGCGACTAGTGCAACTCTTGCCGT
TGCTTTGCTCGGCGCCGGCCAGATTTCCGATATGCGCGGCCGCAAAGCCATGATGGCCCTGTGTCTGTTTAGCGTCGGGG
CTTTGACCGTGCTTTCAGCTTTCGCCGGGACTTGGGGGCAACTCCTCGCGATTCGCGCCCTTGAAGGCCTGTTGCTGAGC
GGCGTGCCGGCGGTCGCCATGGCTTATCTTGCGGAAGAAATTCATCCGAGCGATCTCGGCGGGGCGATGGGGCTCTATAT
TGCCGGCAATGCCTATGGCGGCATGACGGGCCGGGTGCTGGCCAGCCTCATCGTGGATTACATGGATTCCTGGCGAATAG
CGCTTGGCATTATCGGAAGCCTCGGTGTCGCCGCCGCTTTGGCCTTTACGCTTCTGCTGCCACCCTCGCGGCATTTCGTG
GCGATACCCCGGCCGCCGCTTTCCAGCCTGCATCACCCTTTTCTGCGCCATTTCAAGGACCCCGGTCTTCGCTGGCTGTT
TCTCACATCCTTCCTGCTGATGGGATCTTTCGTCACGGTCTATAATTACGCGAGCTATCGTCTCGTCGAACCGCCTTTTT
CACTTGGTGCCGGCCCGGCGGGAGCGATCTTTCTGGTCTATTTGTTCGGTGGATGGGCCTCCGCCTCCTTTGGCCGTTGG
GCGAGCCGGTTTGAGCGGGGTCGGATGCTGATCACAGGCGTTCTATTGATGCTCTTCGGCTTATTGCTGACTTTATCCTC
TTCCCTTTGGCTCACAGTCGCGGGCATTACATGCGTCACCATCGGTTTTTTCGGTGGTCATGCTGTGGCAAGCGGCTGGG
TCGGGCAACGTGCCGAAATAGCCCGGGCGCAAGCGGCCTCGCTCTATCTGTTCAACTATTACATGGGTTCGAGCATAATC
GGTTCGCTTGGCGGCTGGTTCTATGCGGGGGCAGGCTGGACGGGGCTCGCCATCCTCATTGGCTGTCTTTTGCTCGTCGC
TTTGTTCGTGGCGACACGGCTTGCTCGCATTGAGCAGGTAAAGCCAATAAGCACTACGCGGGTGTAA

Upstream 100 bases:

>100_bases
CACTTGCGCGTGAACGATCGTTCCCAGCTTGGGAAAAGCCGGCGCTGGTGGCAAGGATAAACCCGTTACGCTATGGGCGG
CATGAGCATCAGGTCAACGA

Downstream 100 bases:

>100_bases
AAAAGGGGCGAGACCGAATAATCAAATACACGGTCCCCATTCGCCGTTGGCGCGGATACGCCAGGCCTTAAGACCAGCCT
TGGCCACGACGATGCGTCCA

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MHDIPKAAVETPSETPSLTQNPEGPVKSAGSSAVKGVIKGADMASTQIRRGTADYRRVNLALVAAGFSTFAILYCVQALL
PIFSRDFGLSPGAASLALSATSATLAVALLGAGQISDMRGRKAMMALCLFSVGALTVLSAFAGTWGQLLAIRALEGLLLS
GVPAVAMAYLAEEIHPSDLGGAMGLYIAGNAYGGMTGRVLASLIVDYMDSWRIALGIIGSLGVAAALAFTLLLPPSRHFV
AIPRPPLSSLHHPFLRHFKDPGLRWLFLTSFLLMGSFVTVYNYASYRLVEPPFSLGAGPAGAIFLVYLFGGWASASFGRW
ASRFERGRMLITGVLLMLFGLLLTLSSSLWLTVAGITCVTIGFFGGHAVASGWVGQRAEIARAQAASLYLFNYYMGSSII
GSLGGWFYAGAGWTGLAILIGCLLLVALFVATRLARIEQVKPISTTRV

Sequences:

>Translated_448_residues
MHDIPKAAVETPSETPSLTQNPEGPVKSAGSSAVKGVIKGADMASTQIRRGTADYRRVNLALVAAGFSTFAILYCVQALL
PIFSRDFGLSPGAASLALSATSATLAVALLGAGQISDMRGRKAMMALCLFSVGALTVLSAFAGTWGQLLAIRALEGLLLS
GVPAVAMAYLAEEIHPSDLGGAMGLYIAGNAYGGMTGRVLASLIVDYMDSWRIALGIIGSLGVAAALAFTLLLPPSRHFV
AIPRPPLSSLHHPFLRHFKDPGLRWLFLTSFLLMGSFVTVYNYASYRLVEPPFSLGAGPAGAIFLVYLFGGWASASFGRW
ASRFERGRMLITGVLLMLFGLLLTLSSSLWLTVAGITCVTIGFFGGHAVASGWVGQRAEIARAQAASLYLFNYYMGSSII
GSLGGWFYAGAGWTGLAILIGCLLLVALFVATRLARIEQVKPISTTRV
>Mature_448_residues
MHDIPKAAVETPSETPSLTQNPEGPVKSAGSSAVKGVIKGADMASTQIRRGTADYRRVNLALVAAGFSTFAILYCVQALL
PIFSRDFGLSPGAASLALSATSATLAVALLGAGQISDMRGRKAMMALCLFSVGALTVLSAFAGTWGQLLAIRALEGLLLS
GVPAVAMAYLAEEIHPSDLGGAMGLYIAGNAYGGMTGRVLASLIVDYMDSWRIALGIIGSLGVAAALAFTLLLPPSRHFV
AIPRPPLSSLHHPFLRHFKDPGLRWLFLTSFLLMGSFVTVYNYASYRLVEPPFSLGAGPAGAIFLVYLFGGWASASFGRW
ASRFERGRMLITGVLLMLFGLLLTLSSSLWLTVAGITCVTIGFFGGHAVASGWVGQRAEIARAQAASLYLFNYYMGSSII
GSLGGWFYAGAGWTGLAILIGCLLLVALFVATRLARIEQVKPISTTRV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=389, Percent_Identity=48.586118251928, Blast_Score=347, Evalue=1e-96,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 47197; Mature: 47197

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDIPKAAVETPSETPSLTQNPEGPVKSAGSSAVKGVIKGADMASTQIRRGTADYRRVNL
CCCCCCHHHCCCCCCCCCCCCCCCCHHCCCHHHHHHHHCCCCHHHHHHHCCCCHHHHHHH
ALVAAGFSTFAILYCVQALLPIFSRDFGLSPGAASLALSATSATLAVALLGAGQISDMRG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEHHHHHHHHHHHHCCCCCHHHHH
RKAMMALCLFSVGALTVLSAFAGTWGQLLAIRALEGLLLSGVPAVAMAYLAEEIHPSDLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC
GAMGLYIAGNAYGGMTGRVLASLIVDYMDSWRIALGIIGSLGVAAALAFTLLLPPSRHFV
CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
AIPRPPLSSLHHPFLRHFKDPGLRWLFLTSFLLMGSFVTVYNYASYRLVEPPFSLGAGPA
EECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCH
GAIFLVYLFGGWASASFGRWASRFERGRMLITGVLLMLFGLLLTLSSSLWLTVAGITCVT
HHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
IGFFGGHAVASGWVGQRAEIARAQAASLYLFNYYMGSSIIGSLGGWFYAGAGWTGLAILI
HHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHH
GCLLLVALFVATRLARIEQVKPISTTRV
HHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MHDIPKAAVETPSETPSLTQNPEGPVKSAGSSAVKGVIKGADMASTQIRRGTADYRRVNL
CCCCCCHHHCCCCCCCCCCCCCCCCHHCCCHHHHHHHHCCCCHHHHHHHCCCCHHHHHHH
ALVAAGFSTFAILYCVQALLPIFSRDFGLSPGAASLALSATSATLAVALLGAGQISDMRG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEHHHHHHHHHHHHCCCCCHHHHH
RKAMMALCLFSVGALTVLSAFAGTWGQLLAIRALEGLLLSGVPAVAMAYLAEEIHPSDLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC
GAMGLYIAGNAYGGMTGRVLASLIVDYMDSWRIALGIIGSLGVAAALAFTLLLPPSRHFV
CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
AIPRPPLSSLHHPFLRHFKDPGLRWLFLTSFLLMGSFVTVYNYASYRLVEPPFSLGAGPA
EECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCH
GAIFLVYLFGGWASASFGRWASRFERGRMLITGVLLMLFGLLLTLSSSLWLTVAGITCVT
HHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
IGFFGGHAVASGWVGQRAEIARAQAASLYLFNYYMGSSIIGSLGGWFYAGAGWTGLAILI
HHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHH
GCLLLVALFVATRLARIEQVKPISTTRV
HHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]