Definition Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome.
Accession NC_010581
Length 4,170,153

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The map label for this gene is yccV [C]

Identifier: 182679155

GI number: 182679155

Start: 2507098

End: 2507427

Strand: Direct

Name: yccV [C]

Synonym: Bind_2192

Alternate gene names: 182679155

Gene position: 2507098-2507427 (Clockwise)

Preceding gene: 182679151

Following gene: 182679157

Centisome position: 60.12

GC content: 54.85

Gene sequence:

>330_bases
ATGAAATCACGCACCGCCAAATTCGGCATAGGCCAAGTGGTTCGGCATCGGAAATATCCCTTCCGTGGCGTTATTTACGA
TGTCGATCCGGTGTTTGCGAATACGGAAGAATGGTGGCAGGCGATTCCCGAGGAAGTCCGTCCCAATAAGGACCAGCCAT
TTTATCATCTCTTCGCGGAAAATGCGGAGACCGAATATGTCGCCTATGTCTCGGAGCAAAATCTCCTGCTCGATACATCC
GGCGATCCGCTGCGCCATCCGCAGGTCGAGGAGGTGTTCATCCGCTCTCCGGAAGGCGCCTATCAGGTCAAGAGCGCCCG
CCTGAACTGA

Upstream 100 bases:

>100_bases
GTGGGTCTGGTGCCGCGGCAAGCACGCCGGATTCCTCCGGCCCTGCTTGCGTTTCGCATCGTGACTTTTGGGTTGAAGCC
CTTTTCGTGAAACACTGTTC

Downstream 100 bases:

>100_bases
ACGCTCTGTGGCTGGGGTCCCGGCCGGAAGGTCCCTGTTTCCGGCCGCTTCATGTTTATGACTTCCGCTTTTGCGACAAA
GCCTTTGAAGGTGCTTATTT

Product: hemimethylated DNA binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MKSRTAKFGIGQVVRHRKYPFRGVIYDVDPVFANTEEWWQAIPEEVRPNKDQPFYHLFAENAETEYVAYVSEQNLLLDTS
GDPLRHPQVEEVFIRSPEGAYQVKSARLN

Sequences:

>Translated_109_residues
MKSRTAKFGIGQVVRHRKYPFRGVIYDVDPVFANTEEWWQAIPEEVRPNKDQPFYHLFAENAETEYVAYVSEQNLLLDTS
GDPLRHPQVEEVFIRSPEGAYQVKSARLN
>Mature_109_residues
MKSRTAKFGIGQVVRHRKYPFRGVIYDVDPVFANTEEWWQAIPEEVRPNKDQPFYHLFAENAETEYVAYVSEQNLLLDTS
GDPLRHPQVEEVFIRSPEGAYQVKSARLN

Specific function: Unknown

COG id: COG3785

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12713; Mature: 12713

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSRTAKFGIGQVVRHRKYPFRGVIYDVDPVFANTEEWWQAIPEEVRPNKDQPFYHLFAE
CCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCHHHCCCCCCCEEEEEEC
NAETEYVAYVSEQNLLLDTSGDPLRHPQVEEVFIRSPEGAYQVKSARLN
CCCCEEEEEECCCCEEEECCCCCCCCCCCHHEEEECCCCCEEEECCCCC
>Mature Secondary Structure
MKSRTAKFGIGQVVRHRKYPFRGVIYDVDPVFANTEEWWQAIPEEVRPNKDQPFYHLFAE
CCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCHHHCCCCCCCEEEEEEC
NAETEYVAYVSEQNLLLDTSGDPLRHPQVEEVFIRSPEGAYQVKSARLN
CCCCEEEEEECCCCEEEECCCCCCCCCCCHHEEEECCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA