| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182679150
Identifier: 182679150
GI number: 182679150
Start: 2501285
End: 2501902
Strand: Direct
Name: 182679150
Synonym: Bind_2187
Alternate gene names: NA
Gene position: 2501285-2501902 (Clockwise)
Preceding gene: 182679149
Following gene: 182679151
Centisome position: 59.98
GC content: 56.63
Gene sequence:
>618_bases ATGCCCAACGTCCGCGAACCGCTTCTGCATCCCGTCGAAATCGCGCTCCTGCGCCCCACGCAGATCACCGTCGGCTTGCG CGAGGTGGAGGAAAAGCGCAAGGCTTGGCGGATCAAGACGGATAGCAAGGGCGCGGAATTTCTCGGCCAACACATGATCC CCGTTATCCTTGGGCCGAAACAGAGATATTACGTCATTGATCACCATCATCTCGTCCGTGCCCTGCACGCGGAAAATGTC CAGAAGATTTTCGCGACCGTCATCGCCGATCTCTCGAGCCTCACGAAGGAATCCTTCTGGTTTGTGATGGACAATCGGAA TTGGCTGCATCCTTTCGACGAGAACGGTCTGCGCTGCAGCTATGACAAACTCCCCAAATCGGTGGAGGATCTGGTCGATG ATCCTTTCCGTTCCCTTGCCGGCGCCTTGCGGCGGGCGGGCGGCTACGCCAAGGATACGACCCCCTTCAGCGAGTTTCTG TGGGCCGATTTTCTGCGCCAGAGGATCAAGCGCAAGCTTATCGAAAGTGATTTCGAGTCCGCCCTCGAACAAGCCCTGGC ACTGGCGAAGGACAAACAAACCGATTATTTGCCAGGATGGTGTGGCCCTTTTTCATGA
Upstream 100 bases:
>100_bases AGTCTGATGGCGAGCCGGCAGTCGACCGGGCTCGCGACGTGGTTCGAAGTCACATAATCGATACGCAAAGCCAATTAGCC TTGCGTCATAAGGAGAGTTC
Downstream 100 bases:
>100_bases CCAAGCGGCATGATCGGGTCTCTTCAATCGCAATCGGTATCACCACCGTGTTTCTTGCACCGCATTCAAGTGATCTCCAA TCCGGGATCGCTCTGAGCAC
Product: putative ParB-like nuclease
Products: NA
Alternate protein names: ParB-Like Nuclease Superfamily
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MPNVREPLLHPVEIALLRPTQITVGLREVEEKRKAWRIKTDSKGAEFLGQHMIPVILGPKQRYYVIDHHHLVRALHAENV QKIFATVIADLSSLTKESFWFVMDNRNWLHPFDENGLRCSYDKLPKSVEDLVDDPFRSLAGALRRAGGYAKDTTPFSEFL WADFLRQRIKRKLIESDFESALEQALALAKDKQTDYLPGWCGPFS
Sequences:
>Translated_205_residues MPNVREPLLHPVEIALLRPTQITVGLREVEEKRKAWRIKTDSKGAEFLGQHMIPVILGPKQRYYVIDHHHLVRALHAENV QKIFATVIADLSSLTKESFWFVMDNRNWLHPFDENGLRCSYDKLPKSVEDLVDDPFRSLAGALRRAGGYAKDTTPFSEFL WADFLRQRIKRKLIESDFESALEQALALAKDKQTDYLPGWCGPFS >Mature_204_residues PNVREPLLHPVEIALLRPTQITVGLREVEEKRKAWRIKTDSKGAEFLGQHMIPVILGPKQRYYVIDHHHLVRALHAENVQ KIFATVIADLSSLTKESFWFVMDNRNWLHPFDENGLRCSYDKLPKSVEDLVDDPFRSLAGALRRAGGYAKDTTPFSEFLW ADFLRQRIKRKLIESDFESALEQALALAKDKQTDYLPGWCGPFS
Specific function: Unknown
COG id: COG4318
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23644; Mature: 23513
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNVREPLLHPVEIALLRPTQITVGLREVEEKRKAWRIKTDSKGAEFLGQHMIPVILGPK CCCCCCHHCCHHHHEEECCCHHHHHHHHHHHHHHHEECCCCCCHHHHHHHCCCCEEECCC QRYYVIDHHHLVRALHAENVQKIFATVIADLSSLTKESFWFVMDNRNWLHPFDENGLRCS CCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCEEC YDKLPKSVEDLVDDPFRSLAGALRRAGGYAKDTTPFSEFLWADFLRQRIKRKLIESDFES HHHCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ALEQALALAKDKQTDYLPGWCGPFS HHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure PNVREPLLHPVEIALLRPTQITVGLREVEEKRKAWRIKTDSKGAEFLGQHMIPVILGPK CCCCCHHCCHHHHEEECCCHHHHHHHHHHHHHHHEECCCCCCHHHHHHHCCCCEEECCC QRYYVIDHHHLVRALHAENVQKIFATVIADLSSLTKESFWFVMDNRNWLHPFDENGLRCS CCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCEEC YDKLPKSVEDLVDDPFRSLAGALRRAGGYAKDTTPFSEFLWADFLRQRIKRKLIESDFES HHHCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ALEQALALAKDKQTDYLPGWCGPFS HHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA