| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is pcoA [H]
Identifier: 182679149
GI number: 182679149
Start: 2499715
End: 2501241
Strand: Direct
Name: pcoA [H]
Synonym: Bind_2186
Alternate gene names: 182679149
Gene position: 2499715-2501241 (Clockwise)
Preceding gene: 182679144
Following gene: 182679150
Centisome position: 59.94
GC content: 60.58
Gene sequence:
>1527_bases ATGCGGCAAGGCCTCCCCCTCACACGCCGCCATTTTCTCGGGCAGATATCGATCAGCCTCAGCCTGTTGCCGCACCTTTC CCGAACCGCACAGGCCGCCACGGAGGATGGTTTCCAAATCCTCGAGGCCCGGCAAGGCAAGCTGCGCCTTTTGCCCGAGC CACAGCCAGAGACGGATATTTGGGGTTTCGACGGCCTGGTGCCTGGCCCCCTTTTGCGCTTCAAAAAAGGCGACGAAATC AAGATCCGGCTTTTGAACAAGCTCGATCAACCGCTGACTCTGCACTGGCACGGCATGCGCGGCCCCAACGCTATGGCCGG TGTCGGCGGCCTCACGCAGCCGTCCGTGCCGCCCGGTGGCAGTTTTGACTATCGTTTCACGCCGCCCGACAGCGGTCTCT TCTGGTATCATTCGCATGTGCTGCCCTTGACCGGCGAACAATTAGACCACGGTCTTTATGGCGGGATCATCGTGGATGAA CCGGAGCCGCCGCAAGTCGATCGGGATCTGCTGCTGGTTCTGAGTGACTGGCGGCTCGATGGCACAGGCGCACTCGAAAA GGATTATATCGATCGCCGGACTGCCATGGGTATTGGCCGCCTCGGCACACTTATCACCATCAATGACAAGCCGGTTCCCG TAACCGAAACCCTGCGGCCACGCAGCCGGGTCCGTCTGCGCATCATCAGCGCGACGGACGCCCGCGTTATGTTCCTCGGC TTTGAAGCGCTCCGGCCTTACATTATCGCGGTCGATGGCATGCCCTGCGACGCGCCTTTCGAACCGATCCGCCAAACGAT CCCCGCCGGTCCTGGCGCTTGTTTCGACCTCTTGCTCGACCTCCCCGACGCAGCAGAGACGGAGGCCCGTCTCGTCCTGC GCGGCGATGAGGGGCAGCCAGATCAGCCCCTCTTCATTTTCAAGACGGCAAAGGAATCGTCCGACAAGGAAACGCCGAAA GAGGCCCCGCCTCCCATTCCCTCGCTCCCGCATAATCCACTGCTGCCCGTGGCGATCCCTTTGCAAGCGGCTTTCCGTCT CGATCTCACGATCGATGGCGGCGACAAACAGGAGCCTGGGCCGGACAAAAGCATGGCGGGCGCGACGACCAGCAATGGGA AAGGCTCGGACAACAAGGCCGGCACGCCACCAAACCCGCAACAAACCAGTCCCCAACCTGCGTCCCCACCGAATGGCCCT GCTCTATTCTGGACCTTGAACGGAATCTCGCAGCAAGGATTTGGGCCAAAGCCTCTCTTTTCGGTCAAGCGAGGTTCCGC TGTCACGCTTGGCTTCATCAATCGTTCCGCCTTCGTGCAGCAAATGCGCGTCCATGGCCATTGTTTCAGACTTTTGCATG ATCTCGACGATGGCTGGGAACCCTATTGGCGCAATGCGGTACTGGTGCCGCCCGGCCGCACCAAACATATTGCCTTCATC GCCGATAATCCCGGCAAATGGCCAATCGAAAGTCTGATGGCGAGCCGGCAGTCGACCGGGCTCGCGACGTGGTTCGAAGT CACATAA
Upstream 100 bases:
>100_bases CCTTTCGACGTTCCGATCGGACACGCGTTTAAAAGCAACTCGTCGGTCCAAACATCCGTTCCAAGGTCGACAAGCCAGGA TCAACAATCAGGGACTATCC
Downstream 100 bases:
>100_bases TCGATACGCAAAGCCAATTAGCCTTGCGTCATAAGGAGAGTTCATGCCCAACGTCCGCGAACCGCTTCTGCATCCCGTCG AAATCGCGCTCCTGCGCCCC
Product: multicopper oxidase type 3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 508; Mature: 508
Protein sequence:
>508_residues MRQGLPLTRRHFLGQISISLSLLPHLSRTAQAATEDGFQILEARQGKLRLLPEPQPETDIWGFDGLVPGPLLRFKKGDEI KIRLLNKLDQPLTLHWHGMRGPNAMAGVGGLTQPSVPPGGSFDYRFTPPDSGLFWYHSHVLPLTGEQLDHGLYGGIIVDE PEPPQVDRDLLLVLSDWRLDGTGALEKDYIDRRTAMGIGRLGTLITINDKPVPVTETLRPRSRVRLRIISATDARVMFLG FEALRPYIIAVDGMPCDAPFEPIRQTIPAGPGACFDLLLDLPDAAETEARLVLRGDEGQPDQPLFIFKTAKESSDKETPK EAPPPIPSLPHNPLLPVAIPLQAAFRLDLTIDGGDKQEPGPDKSMAGATTSNGKGSDNKAGTPPNPQQTSPQPASPPNGP ALFWTLNGISQQGFGPKPLFSVKRGSAVTLGFINRSAFVQQMRVHGHCFRLLHDLDDGWEPYWRNAVLVPPGRTKHIAFI ADNPGKWPIESLMASRQSTGLATWFEVT
Sequences:
>Translated_508_residues MRQGLPLTRRHFLGQISISLSLLPHLSRTAQAATEDGFQILEARQGKLRLLPEPQPETDIWGFDGLVPGPLLRFKKGDEI KIRLLNKLDQPLTLHWHGMRGPNAMAGVGGLTQPSVPPGGSFDYRFTPPDSGLFWYHSHVLPLTGEQLDHGLYGGIIVDE PEPPQVDRDLLLVLSDWRLDGTGALEKDYIDRRTAMGIGRLGTLITINDKPVPVTETLRPRSRVRLRIISATDARVMFLG FEALRPYIIAVDGMPCDAPFEPIRQTIPAGPGACFDLLLDLPDAAETEARLVLRGDEGQPDQPLFIFKTAKESSDKETPK EAPPPIPSLPHNPLLPVAIPLQAAFRLDLTIDGGDKQEPGPDKSMAGATTSNGKGSDNKAGTPPNPQQTSPQPASPPNGP ALFWTLNGISQQGFGPKPLFSVKRGSAVTLGFINRSAFVQQMRVHGHCFRLLHDLDDGWEPYWRNAVLVPPGRTKHIAFI ADNPGKWPIESLMASRQSTGLATWFEVT >Mature_508_residues MRQGLPLTRRHFLGQISISLSLLPHLSRTAQAATEDGFQILEARQGKLRLLPEPQPETDIWGFDGLVPGPLLRFKKGDEI KIRLLNKLDQPLTLHWHGMRGPNAMAGVGGLTQPSVPPGGSFDYRFTPPDSGLFWYHSHVLPLTGEQLDHGLYGGIIVDE PEPPQVDRDLLLVLSDWRLDGTGALEKDYIDRRTAMGIGRLGTLITINDKPVPVTETLRPRSRVRLRIISATDARVMFLG FEALRPYIIAVDGMPCDAPFEPIRQTIPAGPGACFDLLLDLPDAAETEARLVLRGDEGQPDQPLFIFKTAKESSDKETPK EAPPPIPSLPHNPLLPVAIPLQAAFRLDLTIDGGDKQEPGPDKSMAGATTSNGKGSDNKAGTPPNPQQTSPQPASPPNGP ALFWTLNGISQQGFGPKPLFSVKRGSAVTLGFINRSAFVQQMRVHGHCFRLLHDLDDGWEPYWRNAVLVPPGRTKHIAFI ADNPGKWPIESLMASRQSTGLATWFEVT
Specific function: Required for the copper-inducible expression of copper resistance. May have oxidase activity [H]
COG id: COG2132
COG function: function code Q; Putative multicopper oxidases
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the multicopper oxidase family. CopA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786314, Length=237, Percent_Identity=29.1139240506329, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1789394, Length=305, Percent_Identity=24.5901639344262, Blast_Score=69, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6323703, Length=199, Percent_Identity=28.643216080402, Blast_Score=81, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6321067, Length=219, Percent_Identity=26.9406392694064, Blast_Score=79, Evalue=1e-15, Organism=Drosophila melanogaster, GI28574104, Length=139, Percent_Identity=32.3741007194245, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001117 - InterPro: IPR011706 - InterPro: IPR011707 - InterPro: IPR006376 - InterPro: IPR002355 - InterPro: IPR008972 - InterPro: IPR006311 [H]
Pfam domain/function: PF00394 Cu-oxidase; PF07731 Cu-oxidase_2; PF07732 Cu-oxidase_3 [H]
EC number: NA
Molecular weight: Translated: 55652; Mature: 55652
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS00079 MULTICOPPER_OXIDASE1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQGLPLTRRHFLGQISISLSLLPHLSRTAQAATEDGFQILEARQGKLRLLPEPQPETDI CCCCCCCHHHHHHEEEEEEEEHHHHHHHHHHHHHHCCHHHHHCCCCCEEECCCCCCCCCC WGFDGLVPGPLLRFKKGDEIKIRLLNKLDQPLTLHWHGMRGPNAMAGVGGLTQPSVPPGG CCCCCCCCCCHHCCCCCCCEEEEEEHHCCCCEEEEEECCCCCCHHHCCCCCCCCCCCCCC SFDYRFTPPDSGLFWYHSHVLPLTGEQLDHGLYGGIIVDEPEPPQVDRDLLLVLSDWRLD CCCEEECCCCCCEEEEECEEECCCCHHHCCCCCCCEEECCCCCCCCCCEEEEEEECCEEC GTGALEKDYIDRRTAMGIGRLGTLITINDKPVPVTETLRPRSRVRLRIISATDARVMFLG CCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHCCCCCCEEEEEEEECCCCEEEEEE FEALRPYIIAVDGMPCDAPFEPIRQTIPAGPGACFDLLLDLPDAAETEARLVLRGDEGQP HHHHCCEEEEECCCCCCCCHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCC DQPLFIFKTAKESSDKETPKEAPPPIPSLPHNPLLPVAIPLQAAFRLDLTIDGGDKQEPG CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEEEEEECCCCCCCCC PDKSMAGATTSNGKGSDNKAGTPPNPQQTSPQPASPPNGPALFWTLNGISQQGFGPKPLF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCE SVKRGSAVTLGFINRSAFVQQMRVHGHCFRLLHDLDDGWEPYWRNAVLVPPGRTKHIAFI EECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCEEEECCCCCEEEEEE ADNPGKWPIESLMASRQSTGLATWFEVT ECCCCCCCHHHHHHHHCCCCCEEEEEEC >Mature Secondary Structure MRQGLPLTRRHFLGQISISLSLLPHLSRTAQAATEDGFQILEARQGKLRLLPEPQPETDI CCCCCCCHHHHHHEEEEEEEEHHHHHHHHHHHHHHCCHHHHHCCCCCEEECCCCCCCCCC WGFDGLVPGPLLRFKKGDEIKIRLLNKLDQPLTLHWHGMRGPNAMAGVGGLTQPSVPPGG CCCCCCCCCCHHCCCCCCCEEEEEEHHCCCCEEEEEECCCCCCHHHCCCCCCCCCCCCCC SFDYRFTPPDSGLFWYHSHVLPLTGEQLDHGLYGGIIVDEPEPPQVDRDLLLVLSDWRLD CCCEEECCCCCCEEEEECEEECCCCHHHCCCCCCCEEECCCCCCCCCCEEEEEEECCEEC GTGALEKDYIDRRTAMGIGRLGTLITINDKPVPVTETLRPRSRVRLRIISATDARVMFLG CCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHCCCCCCEEEEEEEECCCCEEEEEE FEALRPYIIAVDGMPCDAPFEPIRQTIPAGPGACFDLLLDLPDAAETEARLVLRGDEGQP HHHHCCEEEEECCCCCCCCHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCC DQPLFIFKTAKESSDKETPKEAPPPIPSLPHNPLLPVAIPLQAAFRLDLTIDGGDKQEPG CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEEEEEECCCCCCCCC PDKSMAGATTSNGKGSDNKAGTPPNPQQTSPQPASPPNGPALFWTLNGISQQGFGPKPLF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCE SVKRGSAVTLGFINRSAFVQQMRVHGHCFRLLHDLDDGWEPYWRNAVLVPPGRTKHIAFI EECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCEEEECCCCCEEEEEE ADNPGKWPIESLMASRQSTGLATWFEVT ECCCCCCCHHHHHHHHCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8594334 [H]