| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is thiG [H]
Identifier: 182679127
GI number: 182679127
Start: 2471224
End: 2472027
Strand: Reverse
Name: thiG [H]
Synonym: Bind_2164
Alternate gene names: 182679127
Gene position: 2472027-2471224 (Counterclockwise)
Preceding gene: 182679128
Following gene: 182679126
Centisome position: 59.28
GC content: 61.82
Gene sequence:
>804_bases ATGAGCGATGGCAAGGAAACGGAGCCTTTTTCCGTCTATGGCGTTTCGCTCGCCTCGCGGCTGTTCGTTGGAACGGCGCA ATATCCCTCGCCGGCCGTGCTCAGTCAGGCCTTGGAGGTCTCCGGCACGGAGGTCGTCACGGTTTCCTTGCGGCGGGAGT CGGGAGCGAGCCGCGCGGGCGAGCATTTCTGGACACTCATCCGCGAACAAGGGCTGCGCGTGCTGCCGAATACCGCTGGC TGCCGCACGGTGAAGGAAGCGGTTACGACCGCGCAAATGGCCCGCGAAGTGTTTGAGACATCCTGGATCAAGCTCGAAGT CATTGGTGAAGACGATACCTTGCAGCCGGATGTCTTTGGTCTCGTCGAGGCCGCGGGCATTCTCTCGCGGGATGGTTTTC AGGTCTTTCCCTATACGACCGATGATCTCGTCGTGGCCGAGAAACTGCTGGGCGCGGGCTGCGAGGTTTTGATGCCCTGG GCCGCGCCGATCGGCTCCGGCCGTGGGCTTAATAATCCCTATGCTTTGCGCTCCTTGCGCGGACATTTCCCCAATGTGCC CTTGATCGTTGATGCCGGTATCGGCGCGCCTTCCCATGCGGCGTCGGCGATGGAAATGGGCTATGACGCGATCCTGCTCA ACACGGCCATTGCCAAAGCGGGTGATCCAGTCGCCATGGCGCGTGCCTTTGCCCTTGCCGTCGAGGCGGGACGTCTCGCT TATCGGTCGCATCCCATGGAGCCACGCGACATGGCGACACCTTCCACCACGATGAGTGGCCTTGCCTTTCGAGATAGCGC CTGA
Upstream 100 bases:
>100_bases ATCAGCGCGCGACGACATCGTTGCAAGAAGGGGATAGCGTGGAAATCCTCATGCCGCGCCAAGGCGGCTAATCAAGACGG ACGATTGGGAGGATCATATC
Downstream 100 bases:
>100_bases TGCTCGATCCCTTTTATCTTATCGTCGATAATGCCGCCTGGCTCGCGCGATTGCTGCCCTGCGGCGTCAAGCTGGTGCAA TTGCGGGTCAAGGACCTGAC
Product: thiazole biosynthesis family protein
Products: 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate; 4-hydroxy-benzyl-alcohol; C1 of tyrosine; ThiS protein [C]
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MSDGKETEPFSVYGVSLASRLFVGTAQYPSPAVLSQALEVSGTEVVTVSLRRESGASRAGEHFWTLIREQGLRVLPNTAG CRTVKEAVTTAQMAREVFETSWIKLEVIGEDDTLQPDVFGLVEAAGILSRDGFQVFPYTTDDLVVAEKLLGAGCEVLMPW AAPIGSGRGLNNPYALRSLRGHFPNVPLIVDAGIGAPSHAASAMEMGYDAILLNTAIAKAGDPVAMARAFALAVEAGRLA YRSHPMEPRDMATPSTTMSGLAFRDSA
Sequences:
>Translated_267_residues MSDGKETEPFSVYGVSLASRLFVGTAQYPSPAVLSQALEVSGTEVVTVSLRRESGASRAGEHFWTLIREQGLRVLPNTAG CRTVKEAVTTAQMAREVFETSWIKLEVIGEDDTLQPDVFGLVEAAGILSRDGFQVFPYTTDDLVVAEKLLGAGCEVLMPW AAPIGSGRGLNNPYALRSLRGHFPNVPLIVDAGIGAPSHAASAMEMGYDAILLNTAIAKAGDPVAMARAFALAVEAGRLA YRSHPMEPRDMATPSTTMSGLAFRDSA >Mature_266_residues SDGKETEPFSVYGVSLASRLFVGTAQYPSPAVLSQALEVSGTEVVTVSLRRESGASRAGEHFWTLIREQGLRVLPNTAGC RTVKEAVTTAQMAREVFETSWIKLEVIGEDDTLQPDVFGLVEAAGILSRDGFQVFPYTTDDLVVAEKLLGAGCEVLMPWA APIGSGRGLNNPYALRSLRGHFPNVPLIVDAGIGAPSHAASAMEMGYDAILLNTAIAKAGDPVAMARAFALAVEAGRLAY RSHPMEPRDMATPSTTMSGLAFRDSA
Specific function: Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S [H]
COG id: COG2022
COG function: function code H; Uncharacterized enzyme of thiazole biosynthesis
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiG family [H]
Homologues:
Organism=Escherichia coli, GI48994993, Length=243, Percent_Identity=42.3868312757202, Blast_Score=180, Evalue=8e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR008867 [H]
Pfam domain/function: PF05690 ThiG [H]
EC number: NA
Molecular weight: Translated: 28374; Mature: 28242
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDGKETEPFSVYGVSLASRLFVGTAQYPSPAVLSQALEVSGTEVVTVSLRRESGASRAG CCCCCCCCCEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCHHH EHFWTLIREQGLRVLPNTAGCRTVKEAVTTAQMAREVFETSWIKLEVIGEDDTLQPDVFG HHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHH LVEAAGILSRDGFQVFPYTTDDLVVAEKLLGAGCEVLMPWAAPIGSGRGLNNPYALRSLR HHHHHHHHCCCCCEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHH GHFPNVPLIVDAGIGAPSHAASAMEMGYDAILLNTAIAKAGDPVAMARAFALAVEAGRLA CCCCCCCEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH YRSHPMEPRDMATPSTTMSGLAFRDSA HHCCCCCCHHCCCCCCHHCCEEECCCC >Mature Secondary Structure SDGKETEPFSVYGVSLASRLFVGTAQYPSPAVLSQALEVSGTEVVTVSLRRESGASRAG CCCCCCCCEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCHHH EHFWTLIREQGLRVLPNTAGCRTVKEAVTTAQMAREVFETSWIKLEVIGEDDTLQPDVFG HHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHH LVEAAGILSRDGFQVFPYTTDDLVVAEKLLGAGCEVLMPWAAPIGSGRGLNNPYALRSLR HHHHHHHHCCCCCEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHH GHFPNVPLIVDAGIGAPSHAASAMEMGYDAILLNTAIAKAGDPVAMARAFALAVEAGRLA CCCCCCCEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH YRSHPMEPRDMATPSTTMSGLAFRDSA HHCCCCCCHHCCCCCCHHCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: deoxyxylulose-5-phosphate; ThiS-COSH; L-tyrosine [C]
Specific reaction: deoxyxylulose-5-phosphate + ThiS-COSH + L-tyrosine = 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate + 4-hydroxy-benzyl-alcohol + C1 of tyrosine + ThiS protein [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA