| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is yqhT [H]
Identifier: 182679122
GI number: 182679122
Start: 2466520
End: 2468358
Strand: Reverse
Name: yqhT [H]
Synonym: Bind_2159
Alternate gene names: 182679122
Gene position: 2468358-2466520 (Counterclockwise)
Preceding gene: 182679126
Following gene: 182679121
Centisome position: 59.19
GC content: 59.05
Gene sequence:
>1839_bases ATGTTCGAAAGTCTCTTTCAATCCTTCGAGGAGGTTGCTGATCCGTCCCTCGGGCATGAACGTACCGCTCTTTTGCGGTC GAAACTTGCGGAACTCGGTCTCGACGGATTTCTCGTTCCCCGTGCCGACGAGCATCAAAACGAATATGTGCCTCCCTCCG AGGAACGATTGGCCTGGCTTTCGGGCTTTACCGGTTCGGCTGGGCTCGCCGTGGTGCTCGCGGATCGCGCGGTGATTTTC GTTGATGGCCGCTATATTCTCGCTGTGTGGGATCAGGTCGATACCAAGCTCTTCGAGCCTGTTGCCTTGGCGGACATCAG CTCCGAGACCTGGCTTGCGAAGCATCTGCCGCAAGGTGCCAAGCTTGGCTATGATCCATGGCTGCATACGCCGGGACAGA TCGAACGGTATCGCCGAGCCGTCGAAGCGGCAGGCGGAGAACTCATTGCTGTCGATACCAATCCGATCGATTCCGTCTGG CAGGATCGCCCGGCAATTCCCCTCGGCAAGATCAATCTGCATCCGAAAAAATTCGCGGGAGAGACGGCGGAGCACAAGCT CGAACGCATTGCAGGCTCGCTTGGGACACGGGATGCGCTGCTGGTCAGTGATCCGCATGCGGTCGCCTGGGCCTTCAACA TTCGCGGCAGCGACGTTGCTCATACGCCTTTGCCCTTGGCCTATGCGTTGATTTTCAACCGCGAGAAAACCGCCGACGCA AAGCCGCGCCTTTATGTGGATGCACGAAAGCTCGACGCAAGCCTGCGCGATAAACTGTTGGAATTGGCTGATCTTGCGGA GCCGGCTGCGCTCGAGGCCGATCTCGTCGCTCTGGGACAGCAGAAAAAGAGCGTCGCTTTCGATCAAGCCACGGCGCCAG CCAAATTGTCGGAACTCGTCGCCGGAGCAGGCGGTCATCATGAGATTGGGCCTGATCCGATTGCCTTGATGAAGGCGCGC AAGAACAAAGCCGAGCTCAAGGGCATGCGCGAGGCGCATCGCCGCGATGGCGCGGCCATGATCGCATTTTTGCATTGGTT TTCCCTCAATGCGCCGTCTGGCCGGCTGACGGAGATCGATGCGGCTGAAGCGCTCGAAACCTTTCGGCGCGATACGCGCA AGCTGAAGGATGTGTCCTTCCCCTCGATCGCGGCGGCGGGACCTAATGCGGCGATCCCGCATTATCACGTGACCAACAAA TCAAACCGCAAGATCGGCAAAGGGATTTTCCTGATCGATTCCGGCGGTCAATATGAGGATGGCACCACGGATATTACGCG CACGCTCGCCGTCGGCCGGCCGACGGCCCTCATGCGCGATCGTTTCACGCGTGTGCTGAAAGGCCATATCGCCATCGCGC GGGCGGTTTTTCCGAAGGGTACGTCCGGCCAACAGATCGATGCCTTGGCCCGCATGGCTCTATGGCAGGCTGGGCTCGAT TTTGACCATGGCACTGGCCATGGTGTCGGCTCCTATCTCTCCGTGCATGAAGGGCCGCAGCGCATTTCGAAGGTGAGCAG CGTCGCGCTCGAACCTGGCATGATCCTCTCGAACGAACCTGGCTATTACAACGCTGGTCATTGGGGAATCCGGATCGAAA ATCTCGTCATTGTCGAGCCGCGCGAGATTCCAGACGCCGAGCGTGAGATGCTTGGTTTCGAGACGATCACCTTGGCGCCG ATCGATCTGGCCCTTGTCGAGCCGAAACTGCTCGATGCGCAAGAGATTGCCTGGCTCAATGCCTATCATGCGCGTGTCCT CGCCGAGCTTTCTCCGCTCGTCGCACCGGATGTCGCGCGCTGGCTGAAACAGGCGACGCAGAAGCTGAAAAAGCCATGA
Upstream 100 bases:
>100_bases CAAGCCCCCAGCAATTTCTATCCAGACTCATCTAATACCCGATACCGGCGCGGGGCTTGCCTGATAAATCGAGCGCACTC TCTCTTCTTTTTGGAAGCCC
Downstream 100 bases:
>100_bases GCACGGACGCGGCCTTCGCCTTGGTGATGACCACATGCGGCGGGGCGGAAAATGCCCGCCGCATTGCGCAAGCTTTGGTC GAAGACAGGCTCGCGGCCTG
Product: peptidase M24
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 612; Mature: 612
Protein sequence:
>612_residues MFESLFQSFEEVADPSLGHERTALLRSKLAELGLDGFLVPRADEHQNEYVPPSEERLAWLSGFTGSAGLAVVLADRAVIF VDGRYILAVWDQVDTKLFEPVALADISSETWLAKHLPQGAKLGYDPWLHTPGQIERYRRAVEAAGGELIAVDTNPIDSVW QDRPAIPLGKINLHPKKFAGETAEHKLERIAGSLGTRDALLVSDPHAVAWAFNIRGSDVAHTPLPLAYALIFNREKTADA KPRLYVDARKLDASLRDKLLELADLAEPAALEADLVALGQQKKSVAFDQATAPAKLSELVAGAGGHHEIGPDPIALMKAR KNKAELKGMREAHRRDGAAMIAFLHWFSLNAPSGRLTEIDAAEALETFRRDTRKLKDVSFPSIAAAGPNAAIPHYHVTNK SNRKIGKGIFLIDSGGQYEDGTTDITRTLAVGRPTALMRDRFTRVLKGHIAIARAVFPKGTSGQQIDALARMALWQAGLD FDHGTGHGVGSYLSVHEGPQRISKVSSVALEPGMILSNEPGYYNAGHWGIRIENLVIVEPREIPDAEREMLGFETITLAP IDLALVEPKLLDAQEIAWLNAYHARVLAELSPLVAPDVARWLKQATQKLKKP
Sequences:
>Translated_612_residues MFESLFQSFEEVADPSLGHERTALLRSKLAELGLDGFLVPRADEHQNEYVPPSEERLAWLSGFTGSAGLAVVLADRAVIF VDGRYILAVWDQVDTKLFEPVALADISSETWLAKHLPQGAKLGYDPWLHTPGQIERYRRAVEAAGGELIAVDTNPIDSVW QDRPAIPLGKINLHPKKFAGETAEHKLERIAGSLGTRDALLVSDPHAVAWAFNIRGSDVAHTPLPLAYALIFNREKTADA KPRLYVDARKLDASLRDKLLELADLAEPAALEADLVALGQQKKSVAFDQATAPAKLSELVAGAGGHHEIGPDPIALMKAR KNKAELKGMREAHRRDGAAMIAFLHWFSLNAPSGRLTEIDAAEALETFRRDTRKLKDVSFPSIAAAGPNAAIPHYHVTNK SNRKIGKGIFLIDSGGQYEDGTTDITRTLAVGRPTALMRDRFTRVLKGHIAIARAVFPKGTSGQQIDALARMALWQAGLD FDHGTGHGVGSYLSVHEGPQRISKVSSVALEPGMILSNEPGYYNAGHWGIRIENLVIVEPREIPDAEREMLGFETITLAP IDLALVEPKLLDAQEIAWLNAYHARVLAELSPLVAPDVARWLKQATQKLKKP >Mature_612_residues MFESLFQSFEEVADPSLGHERTALLRSKLAELGLDGFLVPRADEHQNEYVPPSEERLAWLSGFTGSAGLAVVLADRAVIF VDGRYILAVWDQVDTKLFEPVALADISSETWLAKHLPQGAKLGYDPWLHTPGQIERYRRAVEAAGGELIAVDTNPIDSVW QDRPAIPLGKINLHPKKFAGETAEHKLERIAGSLGTRDALLVSDPHAVAWAFNIRGSDVAHTPLPLAYALIFNREKTADA KPRLYVDARKLDASLRDKLLELADLAEPAALEADLVALGQQKKSVAFDQATAPAKLSELVAGAGGHHEIGPDPIALMKAR KNKAELKGMREAHRRDGAAMIAFLHWFSLNAPSGRLTEIDAAEALETFRRDTRKLKDVSFPSIAAAGPNAAIPHYHVTNK SNRKIGKGIFLIDSGGQYEDGTTDITRTLAVGRPTALMRDRFTRVLKGHIAIARAVFPKGTSGQQIDALARMALWQAGLD FDHGTGHGVGSYLSVHEGPQRISKVSSVALEPGMILSNEPGYYNAGHWGIRIENLVIVEPREIPDAEREMLGFETITLAP IDLALVEPKLLDAQEIAWLNAYHARVLAELSPLVAPDVARWLKQATQKLKKP
Specific function: Unknown
COG id: COG0006
COG function: function code E; Xaa-Pro aminopeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24B family [H]
Homologues:
Organism=Homo sapiens, GI264681563, Length=621, Percent_Identity=37.8421900161031, Blast_Score=393, Evalue=1e-109, Organism=Homo sapiens, GI264681565, Length=620, Percent_Identity=36.4516129032258, Blast_Score=365, Evalue=1e-101, Organism=Homo sapiens, GI93141226, Length=615, Percent_Identity=33.3333333333333, Blast_Score=346, Evalue=4e-95, Organism=Escherichia coli, GI1788728, Length=194, Percent_Identity=35.5670103092784, Blast_Score=100, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17509539, Length=590, Percent_Identity=34.4067796610169, Blast_Score=322, Evalue=4e-88, Organism=Caenorhabditis elegans, GI25149105, Length=622, Percent_Identity=29.7427652733119, Blast_Score=278, Evalue=6e-75, Organism=Saccharomyces cerevisiae, GI6322999, Length=649, Percent_Identity=31.4329738058552, Blast_Score=285, Evalue=1e-77, Organism=Drosophila melanogaster, GI17137632, Length=609, Percent_Identity=35.303776683087, Blast_Score=341, Evalue=1e-93, Organism=Drosophila melanogaster, GI161078230, Length=614, Percent_Identity=30.2931596091205, Blast_Score=272, Evalue=5e-73, Organism=Drosophila melanogaster, GI21357287, Length=614, Percent_Identity=30.2931596091205, Blast_Score=272, Evalue=5e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000587 - InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR001131 [H]
Pfam domain/function: PF01321 Creatinase_N; PF00557 Peptidase_M24 [H]
EC number: 3.4.-.- [C]
Molecular weight: Translated: 66896; Mature: 66896
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFESLFQSFEEVADPSLGHERTALLRSKLAELGLDGFLVPRADEHQNEYVPPSEERLAWL CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCHHHHHHH SGFTGSAGLAVVLADRAVIFVDGRYILAVWDQVDTKLFEPVALADISSETWLAKHLPQGA CCCCCCCCEEEEEECCEEEEECCCEEEEEECHHHHHHHCCHHEECCCCCHHHHHHCCCCC KLGYDPWLHTPGQIERYRRAVEAAGGELIAVDTNPIDSVWQDRPAIPLGKINLHPKKFAG CCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHCCCCCCCCCCCCCCHHHHCC ETAEHKLERIAGSLGTRDALLVSDPHAVAWAFNIRGSDVAHTPLPLAYALIFNREKTADA CHHHHHHHHHHHCCCCCCEEEEECCCEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCC KPRLYVDARKLDASLRDKLLELADLAEPAALEADLVALGQQKKSVAFDQATAPAKLSELV CCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHH AGAGGHHEIGPDPIALMKARKNKAELKGMREAHRRDGAAMIAFLHWFSLNAPSGRLTEID HCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEECH AAEALETFRRDTRKLKDVSFPSIAAAGPNAAIPHYHVTNKSNRKIGKGIFLIDSGGQYED HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCC GTTDITRTLAVGRPTALMRDRFTRVLKGHIAIARAVFPKGTSGQQIDALARMALWQAGLD CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC FDHGTGHGVGSYLSVHEGPQRISKVSSVALEPGMILSNEPGYYNAGHWGIRIENLVIVEP CCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEEEEEECC REIPDAEREMLGFETITLAPIDLALVEPKLLDAQEIAWLNAYHARVLAELSPLVAPDVAR CCCCCHHHHHHCCEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH WLKQATQKLKKP HHHHHHHHHCCC >Mature Secondary Structure MFESLFQSFEEVADPSLGHERTALLRSKLAELGLDGFLVPRADEHQNEYVPPSEERLAWL CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCHHHHHHH SGFTGSAGLAVVLADRAVIFVDGRYILAVWDQVDTKLFEPVALADISSETWLAKHLPQGA CCCCCCCCEEEEEECCEEEEECCCEEEEEECHHHHHHHCCHHEECCCCCHHHHHHCCCCC KLGYDPWLHTPGQIERYRRAVEAAGGELIAVDTNPIDSVWQDRPAIPLGKINLHPKKFAG CCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHCCCCCCCCCCCCCCHHHHCC ETAEHKLERIAGSLGTRDALLVSDPHAVAWAFNIRGSDVAHTPLPLAYALIFNREKTADA CHHHHHHHHHHHCCCCCCEEEEECCCEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCC KPRLYVDARKLDASLRDKLLELADLAEPAALEADLVALGQQKKSVAFDQATAPAKLSELV CCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHH AGAGGHHEIGPDPIALMKARKNKAELKGMREAHRRDGAAMIAFLHWFSLNAPSGRLTEID HCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEECH AAEALETFRRDTRKLKDVSFPSIAAAGPNAAIPHYHVTNKSNRKIGKGIFLIDSGGQYED HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCC GTTDITRTLAVGRPTALMRDRFTRVLKGHIAIARAVFPKGTSGQQIDALARMALWQAGLD CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC FDHGTGHGVGSYLSVHEGPQRISKVSSVALEPGMILSNEPGYYNAGHWGIRIENLVIVEP CCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEEEEEECC REIPDAEREMLGFETITLAPIDLALVEPKLLDAQEIAWLNAYHARVLAELSPLVAPDVAR CCCCCHHHHHHCCEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH WLKQATQKLKKP HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]