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The map label for this gene is oprB [H]

Identifier: 182679119

GI number: 182679119

Start: 2463534

End: 2464970

Strand: Direct

Name: oprB [H]

Synonym: Bind_2156

Alternate gene names: 182679119

Gene position: 2463534-2464970 (Clockwise)

Preceding gene: 182679118

Following gene: 182679123

Centisome position: 59.08

GC content: 56.02

Gene sequence:

>1437_bases
ATGCGGCCCGGCATTTTATGGATAGCGAGAAGCTTCGCCTGCCTGATCTGTCTGGCGTCAGCGCACGCGCAAAACTTGTC
CGCCACGCCGGAGCTTCCTACCGAAGAAACGGAGGCGAAAGGCGCCAAACTTGACACGAGTGGTAATTTACTCGGCGATA
TGGGTGGACTGCGCTCCTGGCTCTATGGCTATGGCGTCACTTTTTCCCTCATCGAGATCGACCAGGTCTTCGGCAATACG
ACCGGCGGCAAGGAACAAAGGCCAGCCTATATCGGCGTGACCGCCGCAACCTTGACCGCCGATCTCGAAAAATCCATTGG
CCTGGAAGGCGGTCTCTTCAATGTCAGTGCCTTGCAGATCCACAGCCGTTCCATCACTCAAGCACAGCTTTTGACCTTCA
ACAATATCAGCGATTCCGAGGCCTGGTGGAGCACACGCCTCTTCGAAATGTGGTACCAGCAAGGCTTTTTCGACGATAAA
TTCGACATCAAGATCGGCCAGATCGATCTCGATACGGAATTCTGGATCAGCCAATATTCCGCCTTCTTCCACAATGCCTC
ATTTGGCTGGGCCTTGATGCCCTCCCTTGAGCTTTATTCCGGCGGCCCTTCCTATCCCATGGGTGCGTTGGGTGTTCGCC
TGCGTTATCGGCCCGATAACCAATGGACATTTCTGTTCGCCGGCGCGGATGATAATCCGACCGGCGGACCTTTTAGCAAT
CCCGTCGACCCCTCCAATCAAAGCTTGCATCCGAGCGGCACGTTCTTCAACCTCGGCAACGGCGCCTTGCTGATTGGAGA
GATGCAATACACCCTCAATCCGCCCCCCAGCGACAAGTCGAAAGCGACCGACGATCCCGGCCTGCCCGGCACCTATCGTC
TTGGCGGCCTCTATGATACCGCCTCCTTTCCCGACCCCCGTTTCGACACTGCCGGTCATCTGCTCGCTTCACCGCAGAGC
AATGGATACCCCATGCAGCACAAGGGCAATTGGATGCTCTATGGCATCATGGACCAGATGATCTGGCGGCCATCGGTGGA
TTCTCCCACAGCGCTCGGCTTTTTCGCGCGGGCATCAGGCACCAATGATGACCGCAATATCGTTTCCTTCGCGGTCGATG
CGGGATTCAATTTCAAAGGCGCCCTTGCTGGTCGCGAGAATGATACGTTCGGCATCGGCTGGGGCATGGGACAGGTGGGC
AATCGGGCCCGTGCGGCAGATCGGGACCATTATTATTTTTCAAGCGATTTCTATCCCATTGGGGGCGCCGAACATCATTT
CGAACTGACTTATGCCGCGCAGGTTACGCCCTGGCTGATCGTCCAGCCGGACTTCCAATACACATGGAACCCAAGCGGCG
GCATTCTCAATCCCAACACTGGCAAGCTCATCGGTAATGAGCTGGTTTTGGGTCTTCACGCAGGCATTACATTTTGA

Upstream 100 bases:

>100_bases
CCATTCAACTGGCCTTATCTTCATTGAATCCTATTTCCGTTTAGGTTAAGTTCTCGAACTCAATTGGATTATCTTTCCTT
AGCCTATCAAGATCTCATTC

Downstream 100 bases:

>100_bases
ATGCCTTTGGACTCATCCACACGAATTGAGTCCATGCCAATGAACGACGCCGATTAGCTACTCAATCCGGAAAGCAGGCT
TGGCATATCGAGCGGTCGGA

Product: carbohydrate-selective porin OprB

Products: NA

Alternate protein names: Glucose porin; Outer membrane protein D1 [H]

Number of amino acids: Translated: 478; Mature: 478

Protein sequence:

>478_residues
MRPGILWIARSFACLICLASAHAQNLSATPELPTEETEAKGAKLDTSGNLLGDMGGLRSWLYGYGVTFSLIEIDQVFGNT
TGGKEQRPAYIGVTAATLTADLEKSIGLEGGLFNVSALQIHSRSITQAQLLTFNNISDSEAWWSTRLFEMWYQQGFFDDK
FDIKIGQIDLDTEFWISQYSAFFHNASFGWALMPSLELYSGGPSYPMGALGVRLRYRPDNQWTFLFAGADDNPTGGPFSN
PVDPSNQSLHPSGTFFNLGNGALLIGEMQYTLNPPPSDKSKATDDPGLPGTYRLGGLYDTASFPDPRFDTAGHLLASPQS
NGYPMQHKGNWMLYGIMDQMIWRPSVDSPTALGFFARASGTNDDRNIVSFAVDAGFNFKGALAGRENDTFGIGWGMGQVG
NRARAADRDHYYFSSDFYPIGGAEHHFELTYAAQVTPWLIVQPDFQYTWNPSGGILNPNTGKLIGNELVLGLHAGITF

Sequences:

>Translated_478_residues
MRPGILWIARSFACLICLASAHAQNLSATPELPTEETEAKGAKLDTSGNLLGDMGGLRSWLYGYGVTFSLIEIDQVFGNT
TGGKEQRPAYIGVTAATLTADLEKSIGLEGGLFNVSALQIHSRSITQAQLLTFNNISDSEAWWSTRLFEMWYQQGFFDDK
FDIKIGQIDLDTEFWISQYSAFFHNASFGWALMPSLELYSGGPSYPMGALGVRLRYRPDNQWTFLFAGADDNPTGGPFSN
PVDPSNQSLHPSGTFFNLGNGALLIGEMQYTLNPPPSDKSKATDDPGLPGTYRLGGLYDTASFPDPRFDTAGHLLASPQS
NGYPMQHKGNWMLYGIMDQMIWRPSVDSPTALGFFARASGTNDDRNIVSFAVDAGFNFKGALAGRENDTFGIGWGMGQVG
NRARAADRDHYYFSSDFYPIGGAEHHFELTYAAQVTPWLIVQPDFQYTWNPSGGILNPNTGKLIGNELVLGLHAGITF
>Mature_478_residues
MRPGILWIARSFACLICLASAHAQNLSATPELPTEETEAKGAKLDTSGNLLGDMGGLRSWLYGYGVTFSLIEIDQVFGNT
TGGKEQRPAYIGVTAATLTADLEKSIGLEGGLFNVSALQIHSRSITQAQLLTFNNISDSEAWWSTRLFEMWYQQGFFDDK
FDIKIGQIDLDTEFWISQYSAFFHNASFGWALMPSLELYSGGPSYPMGALGVRLRYRPDNQWTFLFAGADDNPTGGPFSN
PVDPSNQSLHPSGTFFNLGNGALLIGEMQYTLNPPPSDKSKATDDPGLPGTYRLGGLYDTASFPDPRFDTAGHLLASPQS
NGYPMQHKGNWMLYGIMDQMIWRPSVDSPTALGFFARASGTNDDRNIVSFAVDAGFNFKGALAGRENDTFGIGWGMGQVG
NRARAADRDHYYFSSDFYPIGGAEHHFELTYAAQVTPWLIVQPDFQYTWNPSGGILNPNTGKLIGNELVLGLHAGITF

Specific function: Substrate-selective channel for a variety of different sugars. Could potentially facilitate the diffusion of diverse compounds, dependent on the presence of a hydroxyl group, but is presumably restricted to carbohydrates. Involved in the transport of gluc

COG id: COG3659

COG function: function code M; Carbohydrate-selective porin

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the oprB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007049 [H]

Pfam domain/function: PF04966 OprB [H]

EC number: NA

Molecular weight: Translated: 52332; Mature: 52332

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPGILWIARSFACLICLASAHAQNLSATPELPTEETEAKGAKLDTSGNLLGDMGGLRSW
CCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCEECCCCCHHHHHHHHHHH
LYGYGVTFSLIEIDQVFGNTTGGKEQRPAYIGVTAATLTADLEKSIGLEGGLFNVSALQI
HHHCCCEEEEEEEEHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCEEEEEEEEE
HSRSITQAQLLTFNNISDSEAWWSTRLFEMWYQQGFFDDKFDIKIGQIDLDTEFWISQYS
ECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCHHHHHHHHH
AFFHNASFGWALMPSLELYSGGPSYPMGALGVRLRYRPDNQWTFLFAGADDNPTGGPFSN
HHHHCCCCCEEECCCEEEECCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCC
PVDPSNQSLHPSGTFFNLGNGALLIGEMQYTLNPPPSDKSKATDDPGLPGTYRLGGLYDT
CCCCCCCCCCCCCCEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCEEEC
ASFPDPRFDTAGHLLASPQSNGYPMQHKGNWMLYGIMDQMIWRPSVDSPTALGFFARASG
CCCCCCCCCCCCCEEECCCCCCCCCEECCCEEEEEEHHHHHCCCCCCCCCCEEEEEECCC
TNDDRNIVSFAVDAGFNFKGALAGRENDTFGIGWGMGQVGNRARAADRDHYYFSSDFYPI
CCCCCEEEEEEEECCCCEEEEECCCCCCEEEEECCCHHCCCCCCCCCCCCEEECCCEEEC
GGAEHHFELTYAAQVTPWLIVQPDFQYTWNPSGGILNPNTGKLIGNELVLGLHAGITF
CCCCCEEEEEEEECCCEEEEECCCCCEEECCCCCEECCCCCCEECCEEEEEEECCCCC
>Mature Secondary Structure
MRPGILWIARSFACLICLASAHAQNLSATPELPTEETEAKGAKLDTSGNLLGDMGGLRSW
CCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCEECCCCCHHHHHHHHHHH
LYGYGVTFSLIEIDQVFGNTTGGKEQRPAYIGVTAATLTADLEKSIGLEGGLFNVSALQI
HHHCCCEEEEEEEEHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCEEEEEEEEE
HSRSITQAQLLTFNNISDSEAWWSTRLFEMWYQQGFFDDKFDIKIGQIDLDTEFWISQYS
ECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCHHHHHHHHH
AFFHNASFGWALMPSLELYSGGPSYPMGALGVRLRYRPDNQWTFLFAGADDNPTGGPFSN
HHHHCCCCCEEECCCEEEECCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCC
PVDPSNQSLHPSGTFFNLGNGALLIGEMQYTLNPPPSDKSKATDDPGLPGTYRLGGLYDT
CCCCCCCCCCCCCCEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCEEEC
ASFPDPRFDTAGHLLASPQSNGYPMQHKGNWMLYGIMDQMIWRPSVDSPTALGFFARASG
CCCCCCCCCCCCCEEECCCCCCCCCEECCCEEEEEEHHHHHCCCCCCCCCCEEEEEECCC
TNDDRNIVSFAVDAGFNFKGALAGRENDTFGIGWGMGQVGNRARAADRDHYYFSSDFYPI
CCCCCEEEEEEEECCCCEEEEECCCCCCEEEEECCCHHCCCCCCCCCCCCEEECCCEEEC
GGAEHHFELTYAAQVTPWLIVQPDFQYTWNPSGGILNPNTGKLIGNELVLGLHAGITF
CCCCCEEEEEEEECCCEEEEECCCCCEEECCCCCEECCCCCCEECCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8125108; 10984043; 2450582; 8132494; 7768797 [H]