| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182679114
Identifier: 182679114
GI number: 182679114
Start: 2455824
End: 2457083
Strand: Direct
Name: 182679114
Synonym: Bind_2151
Alternate gene names: NA
Gene position: 2455824-2457083 (Clockwise)
Preceding gene: 182679113
Following gene: 182679115
Centisome position: 58.89
GC content: 56.75
Gene sequence:
>1260_bases ATGCATTTCAAGCCTGTGGCCCGATGCCGTCTATCCCTGCTGTGCGGCCTTTTGATCATGCTCAGCGAGCCTTTTCCGCA TGGAGCCCAAGCAGCGGAACTCAGTTTTCAAGAGGCAATAAATATTGCCTGGAAGATTGATCCAGTCCGACTAAATCTGC TGACCAATCAACATTCGGCCAATGCACGCGCGGGCGCCGCGGATTCGCTTTTTCCTAGTGGCCCGGTCGTAACCGCCGAT TATTTTACCGACAAAACCTTGGGAAGCCGGCAAGGTTATGCAACGTGGCAAGGAAGCTTCTCTGTCCCTCTGTGGCTTCC TGGGCAAAGCGAGGCGACGGTGCGCGTGGCGCAAGCTGAATCCGCGACCGTGCAGGAACGGCTCGATGTCGAGCGTATGT CTTTGTCCGTGAGACTCCTGGACGCCACGGGAGCCGTTGTCCTCGCGCGTCGCAGACAGACAAATGCCCAACGCCAATTC CAAACGATTCAAAAACTCGCCGAGACCATCAACACGATGGTCAAGACGGGCGAAGCACCTTCAACCGACAAGAATGCGAT CGATGCCGAACTCGCGAGCGCCCGATCCGAAGTTGAAAACGCCGCCGAACAGATCACTGTGGCATCAGCCACGCTCGCCG AGATTCTCGGCCGCAAGGATCTGCCGAATATTCTTTCTTACGACACCAATGCCTTGCGTAAAGCGCGGCTCAATCCTTCG CAACTAGTGCCCGATAACGACCCACGCGTGCGCGCGGCCCACATGGCAGTGGTGACCGCCGAAGAAGGCATGCATTTGGC TCAAAAGTCCTTCATGCCGAATCCGCAGATCGGTATTTCCGCCATTCGCGATATTCAATTTGGAAGTCCTTGGGACACCC GTACCGGTGTCACCTTGAACATACCTTTGCCAAGCGACGCCCAGAACATTCCGCTCATCGCCAATGCCCGGGATAAACTC GCCGCAGCCGAAAGCGAGGAGAGCCAAGCCCGGCGCATGGTGAGGGTCGAACTTGCGCAGGTCCGTGCTCGCCTGACGGC CGCAACAGCAACATTGACGAACACCAAAGCCTCGGTTGAGGCCTTAAATAAGCGCGCCGCCGATATCGAACAATCCTGGA AATTGAAGGAATCTTCACTCGTGGAAGCCTTGCGAGCCTATCAAGGCGCCTACACCGCCATGCTGTCTCTCGATCAAGCT GAAACGGCCTGGCATGTGGCCGTTGCCCGAGTGTTTATTGCCGCGGGGCATCTACAGTGA
Upstream 100 bases:
>100_bases CTCCACAACTGTCTTACATGAAAGTCGATATTGCATGCATATGTGCGGGAAAGGCCAGCTTTGAATGTTGACGTCATAAC GAAAAGAAAAGCCCTATCAA
Downstream 100 bases:
>100_bases TGAACATGTTCAAGTATAAGCTTCCTTTCAAGCTTCGGCTTCTCCTGATCGCCTTGTCGTTGTCGAATGTCTTTCCCCTG CCCAATGCCAAAGCACAACA
Product: outer membrane efflux protein
Products: NA
Alternate protein names: Outer Membrane Protein; Outer Membrane Cation Efflux System Protein; Type I Secretion Outer Membrane Protein lC
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MHFKPVARCRLSLLCGLLIMLSEPFPHGAQAAELSFQEAINIAWKIDPVRLNLLTNQHSANARAGAADSLFPSGPVVTAD YFTDKTLGSRQGYATWQGSFSVPLWLPGQSEATVRVAQAESATVQERLDVERMSLSVRLLDATGAVVLARRRQTNAQRQF QTIQKLAETINTMVKTGEAPSTDKNAIDAELASARSEVENAAEQITVASATLAEILGRKDLPNILSYDTNALRKARLNPS QLVPDNDPRVRAAHMAVVTAEEGMHLAQKSFMPNPQIGISAIRDIQFGSPWDTRTGVTLNIPLPSDAQNIPLIANARDKL AAAESEESQARRMVRVELAQVRARLTAATATLTNTKASVEALNKRAADIEQSWKLKESSLVEALRAYQGAYTAMLSLDQA ETAWHVAVARVFIAAGHLQ
Sequences:
>Translated_419_residues MHFKPVARCRLSLLCGLLIMLSEPFPHGAQAAELSFQEAINIAWKIDPVRLNLLTNQHSANARAGAADSLFPSGPVVTAD YFTDKTLGSRQGYATWQGSFSVPLWLPGQSEATVRVAQAESATVQERLDVERMSLSVRLLDATGAVVLARRRQTNAQRQF QTIQKLAETINTMVKTGEAPSTDKNAIDAELASARSEVENAAEQITVASATLAEILGRKDLPNILSYDTNALRKARLNPS QLVPDNDPRVRAAHMAVVTAEEGMHLAQKSFMPNPQIGISAIRDIQFGSPWDTRTGVTLNIPLPSDAQNIPLIANARDKL AAAESEESQARRMVRVELAQVRARLTAATATLTNTKASVEALNKRAADIEQSWKLKESSLVEALRAYQGAYTAMLSLDQA ETAWHVAVARVFIAAGHLQ >Mature_419_residues MHFKPVARCRLSLLCGLLIMLSEPFPHGAQAAELSFQEAINIAWKIDPVRLNLLTNQHSANARAGAADSLFPSGPVVTAD YFTDKTLGSRQGYATWQGSFSVPLWLPGQSEATVRVAQAESATVQERLDVERMSLSVRLLDATGAVVLARRRQTNAQRQF QTIQKLAETINTMVKTGEAPSTDKNAIDAELASARSEVENAAEQITVASATLAEILGRKDLPNILSYDTNALRKARLNPS QLVPDNDPRVRAAHMAVVTAEEGMHLAQKSFMPNPQIGISAIRDIQFGSPWDTRTGVTLNIPLPSDAQNIPLIANARDKL AAAESEESQARRMVRVELAQVRARLTAATATLTNTKASVEALNKRAADIEQSWKLKESSLVEALRAYQGAYTAMLSLDQA ETAWHVAVARVFIAAGHLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45548; Mature: 45548
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFKPVARCRLSLLCGLLIMLSEPFPHGAQAAELSFQEAINIAWKIDPVRLNLLTNQHSA CCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCEEEEEECCEEEEEEECCCCC NARAGAADSLFPSGPVVTADYFTDKTLGSRQGYATWQGSFSVPLWLPGQSEATVRVAQAE CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCEEEEEECCCCCCEEEEECCC SATVQERLDVERMSLSVRLLDATGAVVLARRRQTNAQRQFQTIQKLAETINTMVKTGEAP HHHHHHHHHHHHHEEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC STDKNAIDAELASARSEVENAAEQITVASATLAEILGRKDLPNILSYDTNALRKARLNPS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHCCCHH QLVPDNDPRVRAAHMAVVTAEEGMHLAQKSFMPNPQIGISAIRDIQFGSPWDTRTGVTLN HCCCCCCCCEEEEEEEEEECCCCHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCEEEE IPLPSDAQNIPLIANARDKLAAAESEESQARRMVRVELAQVRARLTAATATLTNTKASVE CCCCCCCCCCCEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH ALNKRAADIEQSWKLKESSLVEALRAYQGAYTAMLSLDQAETAWHVAVARVFIAAGHLQ HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MHFKPVARCRLSLLCGLLIMLSEPFPHGAQAAELSFQEAINIAWKIDPVRLNLLTNQHSA CCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCEEEEEECCEEEEEEECCCCC NARAGAADSLFPSGPVVTADYFTDKTLGSRQGYATWQGSFSVPLWLPGQSEATVRVAQAE CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCEEEEEECCCCCCEEEEECCC SATVQERLDVERMSLSVRLLDATGAVVLARRRQTNAQRQFQTIQKLAETINTMVKTGEAP HHHHHHHHHHHHHEEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC STDKNAIDAELASARSEVENAAEQITVASATLAEILGRKDLPNILSYDTNALRKARLNPS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHCCCHH QLVPDNDPRVRAAHMAVVTAEEGMHLAQKSFMPNPQIGISAIRDIQFGSPWDTRTGVTLN HCCCCCCCCEEEEEEEEEECCCCHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCEEEE IPLPSDAQNIPLIANARDKLAAAESEESQARRMVRVELAQVRARLTAATATLTNTKASVE CCCCCCCCCCCEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH ALNKRAADIEQSWKLKESSLVEALRAYQGAYTAMLSLDQAETAWHVAVARVFIAAGHLQ HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA