| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182679055
Identifier: 182679055
GI number: 182679055
Start: 2390353
End: 2391441
Strand: Direct
Name: 182679055
Synonym: Bind_2091
Alternate gene names: NA
Gene position: 2390353-2391441 (Clockwise)
Preceding gene: 182679054
Following gene: 182679056
Centisome position: 57.32
GC content: 61.07
Gene sequence:
>1089_bases ATGACAACATGGCCCGACACACGAATCCTCGATCTCTTCGGCATTGAGCTCCCCATCATCCAGGCACCGATGGCCGGGGC CACGACTCCCGAGATGGTCATCGCGGTCAGCGAGGCTGGAGGGCTCGGCTCATTGCCCAGCGCTCAATATACGGTCGAGC AGCTTCGCGCGGCTTTGGAAAGCATACGTTCTGGTACATCCCGGCCGATCAATGTCAATTTCTTCTGCCACGTCATGCCC GCTGACGATCCCGCGCGGCAAATGGCCTGGCGGGCCAGGCTCGCGCCCTATTACGTGGAGGCTGGGCTCGATCCAGCCGT CCCCCCGCCCGTTACGGGCCGCGCCCCCTTTGATGACGCTTTCTGTCAGGTCGTCGAGGAATTTCGGCCGGAAGTCGTCA GTTTCCATTTTGGCCTGCCGGAAACTTCTTTGTTGGAACGGGTGAAAAAGATCGGCGCCAAGGTCATATCCTCTGCCACG ACTGTCGCCGAGGCCCTCTGGCTCAATGAGCGTGGCATTGATGCCATTATCGCCATGGGTTTCGAAGCCGGCGGTCATCG CGGCAATTTTCTGACCCAGGATATGGCGACCCAAGTCGGGACCATCGCGCTCGTGCCACAAATCGTCGATGCCGTTCGCG TCCCCGTCATCGCGGCCGGCGGCATCGCCGATGGGCGCGGCATAGCAGCCGCTTTCATGCTCGGGGCTTCGGCTGTGCAG ATCGGCACCTCCTATCTTTTTACACAGGAAGCGAAAATCCCCGCGATCCACAGGGAAGCCTTGGAATCCGCCACCGACGA CAATACGGCGCTGACCAATCTCTTCACCGGTCGGCCTGCGCGCGGCATTCTCAACCGAATCATGCGCGAGATCGGCCCGC TTTCGGATCTTGCTCCCGCTTTTCCAACCGCAGGCGGGGCACTCGCCCCCTTAAAGAGCCATGCGGAAGCCAAGCAATCG GGGGATTTCACCAACCTTTGGTCAGGTCAGGCCGCGCGCCTGGCGCATAAGCTCCTGCCTGCCGGAACTTTGACCCGACA ATTGGCGGATGAGGCAGAAAAGCGCCTGTACCCTGGCGGTGCACATTGA
Upstream 100 bases:
>100_bases CATGTCGATGGTGGCCAGAACGCCGGCCATTGGTGAGCCCCACACGCGAAATATGACGCCGATTCCAAACTCTTCTTCTC AGTTCCCAAAGGAGCCTCGC
Downstream 100 bases:
>100_bases TCGGAACCAATATCCCCGCTGCTCAAAAGGCTTTTTGCCTCTGCATGCTTTTGGCGAGACCTTGGTGCATCCGTCCGTGC CGCTCAAGAGATCGCGTCAT
Product: 2-nitropropane dioxygenase NPD
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MTTWPDTRILDLFGIELPIIQAPMAGATTPEMVIAVSEAGGLGSLPSAQYTVEQLRAALESIRSGTSRPINVNFFCHVMP ADDPARQMAWRARLAPYYVEAGLDPAVPPPVTGRAPFDDAFCQVVEEFRPEVVSFHFGLPETSLLERVKKIGAKVISSAT TVAEALWLNERGIDAIIAMGFEAGGHRGNFLTQDMATQVGTIALVPQIVDAVRVPVIAAGGIADGRGIAAAFMLGASAVQ IGTSYLFTQEAKIPAIHREALESATDDNTALTNLFTGRPARGILNRIMREIGPLSDLAPAFPTAGGALAPLKSHAEAKQS GDFTNLWSGQAARLAHKLLPAGTLTRQLADEAEKRLYPGGAH
Sequences:
>Translated_362_residues MTTWPDTRILDLFGIELPIIQAPMAGATTPEMVIAVSEAGGLGSLPSAQYTVEQLRAALESIRSGTSRPINVNFFCHVMP ADDPARQMAWRARLAPYYVEAGLDPAVPPPVTGRAPFDDAFCQVVEEFRPEVVSFHFGLPETSLLERVKKIGAKVISSAT TVAEALWLNERGIDAIIAMGFEAGGHRGNFLTQDMATQVGTIALVPQIVDAVRVPVIAAGGIADGRGIAAAFMLGASAVQ IGTSYLFTQEAKIPAIHREALESATDDNTALTNLFTGRPARGILNRIMREIGPLSDLAPAFPTAGGALAPLKSHAEAKQS GDFTNLWSGQAARLAHKLLPAGTLTRQLADEAEKRLYPGGAH >Mature_361_residues TTWPDTRILDLFGIELPIIQAPMAGATTPEMVIAVSEAGGLGSLPSAQYTVEQLRAALESIRSGTSRPINVNFFCHVMPA DDPARQMAWRARLAPYYVEAGLDPAVPPPVTGRAPFDDAFCQVVEEFRPEVVSFHFGLPETSLLERVKKIGAKVISSATT VAEALWLNERGIDAIIAMGFEAGGHRGNFLTQDMATQVGTIALVPQIVDAVRVPVIAAGGIADGRGIAAAFMLGASAVQI GTSYLFTQEAKIPAIHREALESATDDNTALTNLFTGRPARGILNRIMREIGPLSDLAPAFPTAGGALAPLKSHAEAKQSG DFTNLWSGQAARLAHKLLPAGTLTRQLADEAEKRLYPGGAH
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322609, Length=303, Percent_Identity=33.3333333333333, Blast_Score=148, Evalue=2e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 38411; Mature: 38280
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTWPDTRILDLFGIELPIIQAPMAGATTPEMVIAVSEAGGLGSLPSAQYTVEQLRAALE CCCCCCCEEHHHHCCCCCCEECCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHH SIRSGTSRPINVNFFCHVMPADDPARQMAWRARLAPYYVEAGLDPAVPPPVTGRAPFDDA HHHCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCHHH FCQVVEEFRPEVVSFHFGLPETSLLERVKKIGAKVISSATTVAEALWLNERGIDAIIAMG HHHHHHHHCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC FEAGGHRGNFLTQDMATQVGTIALVPQIVDAVRVPVIAAGGIADGRGIAAAFMLGASAVQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHH IGTSYLFTQEAKIPAIHREALESATDDNTALTNLFTGRPARGILNRIMREIGPLSDLAPA HHHHHEEECCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCHHHHCCC FPTAGGALAPLKSHAEAKQSGDFTNLWSGQAARLAHKLLPAGTLTRQLADEAEKRLYPGG CCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC AH CC >Mature Secondary Structure TTWPDTRILDLFGIELPIIQAPMAGATTPEMVIAVSEAGGLGSLPSAQYTVEQLRAALE CCCCCCEEHHHHCCCCCCEECCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHH SIRSGTSRPINVNFFCHVMPADDPARQMAWRARLAPYYVEAGLDPAVPPPVTGRAPFDDA HHHCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCHHH FCQVVEEFRPEVVSFHFGLPETSLLERVKKIGAKVISSATTVAEALWLNERGIDAIIAMG HHHHHHHHCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC FEAGGHRGNFLTQDMATQVGTIALVPQIVDAVRVPVIAAGGIADGRGIAAAFMLGASAVQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHH IGTSYLFTQEAKIPAIHREALESATDDNTALTNLFTGRPARGILNRIMREIGPLSDLAPA HHHHHEEECCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCHHHHCCC FPTAGGALAPLKSHAEAKQSGDFTNLWSGQAARLAHKLLPAGTLTRQLADEAEKRLYPGG CCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC AH CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA