| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182678897
Identifier: 182678897
GI number: 182678897
Start: 2200981
End: 2202525
Strand: Direct
Name: 182678897
Synonym: Bind_1930
Alternate gene names: NA
Gene position: 2200981-2202525 (Clockwise)
Preceding gene: 182678896
Following gene: 182678899
Centisome position: 52.78
GC content: 60.65
Gene sequence:
>1545_bases ATGCGGCCTGTTCGAGGTTTTATTCTTCTCGCGACAATTTCGCTTCTCTTCACCCTCCCCTTGACCTTTCCTTCCTCGGC TAGGGCTGAACAAACGGTCCCAATCCCGCGCGCGGAAACCGAACAGACCAAGGATACCACGCCGCCGCATCCCCTGCCCG CTCCGGTTACGACGACCCATACGCTCGATCTGCCCGGACGCAGCCTGAATTTTCAGGCCATAGCCGGAGCGATCAAACTT TCCGACGCGCAAAGCGGCACACCAGAAGCCGACATTGGTTTTACCGCCTTCCTCCTCAACGGCCAGGAAGCGTCACAGCG CCCCATCGTGCTGGTCTTTAACGGCGGGCCGGGAGCTTCTTCCGGCTGGCTTAATCTCGGCGCGCTCGGACCGTGGCGGC TCAAAGCCGACGCTCCTCTTCTTGCGCCCTCACAACCGCCCATGCTCGTGCCCAATGCCGAGACCTGGCTCGATTTCGCC GATCTCGTCTTTTTCGATCCGCCCGGCACCGGCTACAGCCGGCTTTACGGCAAGGATGACGAAGCCCGGCGGAGCTTTTT TTCCGTCAATGGCGACATCAGCGCCTTGAGCGTCGCCATTCGCAAATGGCTGGCCGAGCATGATCGTCTCGCCAGTCCGA AATTCATCGTCGGTGAGAGTTATGGTGGATTTCGCGCGCCCAAACTCGCCCGTCGCCTGCAAGAAACAGAAGGCATCGGC GTTTCGGGCCTCATCATGATCTCGCCTGTCCTCGATTTCAGTTGGTTCGAGGGCGCCAATAATCCCCTCATCGCGGTCGC GCGACTGCCATCGCTCACCGCCACCGCGCGCGGACTCGATGGAGGCGCGAGCCGAGCCGATCTCGCCGATGTGGAAGCCT ATGCAAGCGGCCCCTATCTCGTCGATCTCCTGCGCGGCGAACGCGATCCCGCCGCGCTCGACCGGCTGGCGGCCAAGGTT TCCGCATTCACCAAGCTCGATCCCACTCTGGTGCGTCGGCTCGGCGGCCGTATCGATCTTGCGACGCTCTCACGTGAGCG CAAGCGCGATGAAGGCAAAGTCGCAAGCCTCTATGACGCACGCATTCTCGGCTATGATCCTGATCCCCATCAGGCCTCGA GCGATTATGCCGATCCAATCCTGGACGCTTTGCGCGCACCTCTCGCCAGCGCCATGGCGGATCTCATCGCGCATCGCTTG AACTGGCCGATCGAGGCTCGCTATGAAATTCTCAACGACAATGTCAATCGGCAATGGAATTGGAACCCGGATCGGGGCCA TGCCCATGCCCAGGCGGAATCCTTAAGCGACCTCAAACATGTGATGGCGCTCGATCCGCGCCTGCGCGTGCTGGTCATCC ATGGATTGAGCGATATTGTAACGCCCTATTTCGCCTCGAAACTTCTGCTCGACCAAGTCGCACCCATGGGCGATCCTGAT CGCCTGCGTTTGTCGGTCTATCCAGGCGGCCACATGCTCTATCTCGAAGAGACGAGCCGAGCGAAATTGCGCGAGGATGC GGCCAAGCTGATCACCGGTCCCTGA
Upstream 100 bases:
>100_bases CGCCCGCCGCCTGAATTGATGCTACCAAAGGTCGCTCTTCCTGATCATGGAACGCACACCAGATTCGGCTTTCGGCATCC ACCTGCTGCAGGGGAAATGA
Downstream 100 bases:
>100_bases AGGTCCCGCTTCCACCCGAAGATCCAAGTCGAAAAATCCGGGAACGGAGCGATTTAGCGCGACAGGCTGATTATTCCTCA GCGTCAGTGAAGAGGATCAC
Product: peptidase S10 serine carboxypeptidase
Products: NA
Alternate protein names: Serine Carboxypeptidase Family Protein; Carboxypeptidase-Related Protein; Serine Carboxypeptidase; Carboxypeptidase C; Serine-Type Carboxypeptidase Family Protein; S10 Family Peptidase; Carboxypeptidase; S10 Family Carboxypeptidase; Carboxypeptidase-Like Protein; Serine Carboxypeptidase Superfamily; Peptidase S
Number of amino acids: Translated: 514; Mature: 514
Protein sequence:
>514_residues MRPVRGFILLATISLLFTLPLTFPSSARAEQTVPIPRAETEQTKDTTPPHPLPAPVTTTHTLDLPGRSLNFQAIAGAIKL SDAQSGTPEADIGFTAFLLNGQEASQRPIVLVFNGGPGASSGWLNLGALGPWRLKADAPLLAPSQPPMLVPNAETWLDFA DLVFFDPPGTGYSRLYGKDDEARRSFFSVNGDISALSVAIRKWLAEHDRLASPKFIVGESYGGFRAPKLARRLQETEGIG VSGLIMISPVLDFSWFEGANNPLIAVARLPSLTATARGLDGGASRADLADVEAYASGPYLVDLLRGERDPAALDRLAAKV SAFTKLDPTLVRRLGGRIDLATLSRERKRDEGKVASLYDARILGYDPDPHQASSDYADPILDALRAPLASAMADLIAHRL NWPIEARYEILNDNVNRQWNWNPDRGHAHAQAESLSDLKHVMALDPRLRVLVIHGLSDIVTPYFASKLLLDQVAPMGDPD RLRLSVYPGGHMLYLEETSRAKLREDAAKLITGP
Sequences:
>Translated_514_residues MRPVRGFILLATISLLFTLPLTFPSSARAEQTVPIPRAETEQTKDTTPPHPLPAPVTTTHTLDLPGRSLNFQAIAGAIKL SDAQSGTPEADIGFTAFLLNGQEASQRPIVLVFNGGPGASSGWLNLGALGPWRLKADAPLLAPSQPPMLVPNAETWLDFA DLVFFDPPGTGYSRLYGKDDEARRSFFSVNGDISALSVAIRKWLAEHDRLASPKFIVGESYGGFRAPKLARRLQETEGIG VSGLIMISPVLDFSWFEGANNPLIAVARLPSLTATARGLDGGASRADLADVEAYASGPYLVDLLRGERDPAALDRLAAKV SAFTKLDPTLVRRLGGRIDLATLSRERKRDEGKVASLYDARILGYDPDPHQASSDYADPILDALRAPLASAMADLIAHRL NWPIEARYEILNDNVNRQWNWNPDRGHAHAQAESLSDLKHVMALDPRLRVLVIHGLSDIVTPYFASKLLLDQVAPMGDPD RLRLSVYPGGHMLYLEETSRAKLREDAAKLITGP >Mature_514_residues MRPVRGFILLATISLLFTLPLTFPSSARAEQTVPIPRAETEQTKDTTPPHPLPAPVTTTHTLDLPGRSLNFQAIAGAIKL SDAQSGTPEADIGFTAFLLNGQEASQRPIVLVFNGGPGASSGWLNLGALGPWRLKADAPLLAPSQPPMLVPNAETWLDFA DLVFFDPPGTGYSRLYGKDDEARRSFFSVNGDISALSVAIRKWLAEHDRLASPKFIVGESYGGFRAPKLARRLQETEGIG VSGLIMISPVLDFSWFEGANNPLIAVARLPSLTATARGLDGGASRADLADVEAYASGPYLVDLLRGERDPAALDRLAAKV SAFTKLDPTLVRRLGGRIDLATLSRERKRDEGKVASLYDARILGYDPDPHQASSDYADPILDALRAPLASAMADLIAHRL NWPIEARYEILNDNVNRQWNWNPDRGHAHAQAESLSDLKHVMALDPRLRVLVIHGLSDIVTPYFASKLLLDQVAPMGDPD RLRLSVYPGGHMLYLEETSRAKLREDAAKLITGP
Specific function: Unknown
COG id: COG2939
COG function: function code E; Carboxypeptidase C (cathepsin A)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55886; Mature: 55886
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS00131 CARBOXYPEPT_SER_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPVRGFILLATISLLFTLPLTFPSSARAEQTVPIPRAETEQTKDTTPPHPLPAPVTTTH CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE TLDLPGRSLNFQAIAGAIKLSDAQSGTPEADIGFTAFLLNGQEASQRPIVLVFNGGPGAS EEECCCCCCCHHHHCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCC SGWLNLGALGPWRLKADAPLLAPSQPPMLVPNAETWLDFADLVFFDPPGTGYSRLYGKDD CCCEEECCCCCEEEECCCCCCCCCCCCEECCCHHHHHCHHHEEEECCCCCCHHHCCCCCH EARRSFFSVNGDISALSVAIRKWLAEHDRLASPKFIVGESYGGFRAPKLARRLQETEGIG HHHHHHEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCC VSGLIMISPVLDFSWFEGANNPLIAVARLPSLTATARGLDGGASRADLADVEAYASGPYL CCEEEEEEHHHCCHHHCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCHHHHHHHCCCCEE VDLLRGERDPAALDRLAAKVSAFTKLDPTLVRRLGGRIDLATLSRERKRDEGKVASLYDA EEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEHHHHHHHHCCCCCEEEEECC RILGYDPDPHQASSDYADPILDALRAPLASAMADLIAHRLNWPIEARYEILNDNVNRQWN EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCC WNPDRGHAHAQAESLSDLKHVMALDPRLRVLVIHGLSDIVTPYFASKLLLDQVAPMGDPD CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCC RLRLSVYPGGHMLYLEETSRAKLREDAAKLITGP CEEEEEECCCEEEEEECCCHHHHHHHHHHHCCCC >Mature Secondary Structure MRPVRGFILLATISLLFTLPLTFPSSARAEQTVPIPRAETEQTKDTTPPHPLPAPVTTTH CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE TLDLPGRSLNFQAIAGAIKLSDAQSGTPEADIGFTAFLLNGQEASQRPIVLVFNGGPGAS EEECCCCCCCHHHHCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCC SGWLNLGALGPWRLKADAPLLAPSQPPMLVPNAETWLDFADLVFFDPPGTGYSRLYGKDD CCCEEECCCCCEEEECCCCCCCCCCCCEECCCHHHHHCHHHEEEECCCCCCHHHCCCCCH EARRSFFSVNGDISALSVAIRKWLAEHDRLASPKFIVGESYGGFRAPKLARRLQETEGIG HHHHHHEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCC VSGLIMISPVLDFSWFEGANNPLIAVARLPSLTATARGLDGGASRADLADVEAYASGPYL CCEEEEEEHHHCCHHHCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCHHHHHHHCCCCEE VDLLRGERDPAALDRLAAKVSAFTKLDPTLVRRLGGRIDLATLSRERKRDEGKVASLYDA EEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEHHHHHHHHCCCCCEEEEECC RILGYDPDPHQASSDYADPILDALRAPLASAMADLIAHRLNWPIEARYEILNDNVNRQWN EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCC WNPDRGHAHAQAESLSDLKHVMALDPRLRVLVIHGLSDIVTPYFASKLLLDQVAPMGDPD CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCC RLRLSVYPGGHMLYLEETSRAKLREDAAKLITGP CEEEEEECCCEEEEEECCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA