| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is mrp [H]
Identifier: 182678757
GI number: 182678757
Start: 2024406
End: 2025491
Strand: Reverse
Name: mrp [H]
Synonym: Bind_1786
Alternate gene names: 182678757
Gene position: 2025491-2024406 (Counterclockwise)
Preceding gene: 182678760
Following gene: 182678755
Centisome position: 48.57
GC content: 59.48
Gene sequence:
>1086_bases ATGGTCAGCGATCAAGACGTTCTCAACGCGCTCGGGACGGTCCTCGGACCGGATGGAAAAACGCCGCTGCCTCAATCGGG CGCCATTGCTGGCCTCTCGATCAAGGATGATAAAGTTTATCTTTCGATCGCGATCGATCCGCAACAGGCAGGCGCATTAG AACCCATGCGCGCGGCCGCCGAAGCCGTAGTCAAGAAACTCAAGGGCGTTGGCAATGCCTTGGTGAGCTTGACGGCAGAG AAACAGACGCCGCCGCCCGCGCCACCCAAGCCGCAGGCGCCCCGTAGCATTGCCATTCCGGGCATTACTCACATTATCGC GGTATCCTCCGGCAAAGGTGGCGTCGGTAAATCGACCACCTCCGTGAATATCGCTCTGGCGCTCGCCTCGCTCGGCTGGA AAGTCGGCATTCTCGATGCCGATATTTATGGCCCCTCGCTGCCACGCCTGCTCGGTCTTAAAGGCCAACCCGAATCGGAA GGGCGCTTCATGAAGCCCCTGGAGGCTTTTGGCATAAAGGCGATTTCCATCGGTTTCATGGTCGATGAAGAAGAACCGAT GGTTTGGCGCGGTCCCATGGTCATGGCCGCCGTCCAGCAATTGCTCCGCGATGTCACTTGGGGCGAGCTCGATTGCCTCG TGGTGGATATGCCCCCCGGCACTGGCGATGCGCAATTGACCCTGGCGCAGAATGTCCCGCTGGCTGGCGCGGTCGTCGTT TCAACGCCGCAGGATCTTGCCTTGATCGATGCGCGGCGCGGCATTGCCATGTTTAACAAGGTCGATGTGCCGGTGCTCGG TATTGTCGAAAATATGAGCTATTTCCTTTGCCCCCATTGTGGTGGGCGCTCGGATATTTTCGCGCATGGCGGCGCGAGGG CGGAGGCCGAACGTCTCGGCGTGCCTTTCCTCGGCGAGGTCCCGCTGCATATGACGATCCGTGAACGCGCCGATTCGGGC AAGCCGGTCGTCGTCTCTGAACCGGACAGCCCCTATGCCAAGGTCTATCTGGATATTGCCGGACAGATCAAAGCCATGCT TGAAAAAGGCCGGCAGCGCGTCGCACCGAAGATCGTGATCGAATAA
Upstream 100 bases:
>100_bases CAATATCGCGTGCAAAGCAGATTGGTTCTCCAATTCGGTCTCGGTCATTTTCAACTCGGCCGACCGAACAGATCAGAACT CGACGAGGGAGCGAGTCAGA
Downstream 100 bases:
>100_bases GAGAAGCGATCGATTTCCAAACCTTTGAAGCGCAGTCATGGTACCAACGGTCATAATAGATGACCGTTGGACTGCTCTTG AATTTTCGCTCTCGCTTTGA
Product: nucleotide-binding protein-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MVSDQDVLNALGTVLGPDGKTPLPQSGAIAGLSIKDDKVYLSIAIDPQQAGALEPMRAAAEAVVKKLKGVGNALVSLTAE KQTPPPAPPKPQAPRSIAIPGITHIIAVSSGKGGVGKSTTSVNIALALASLGWKVGILDADIYGPSLPRLLGLKGQPESE GRFMKPLEAFGIKAISIGFMVDEEEPMVWRGPMVMAAVQQLLRDVTWGELDCLVVDMPPGTGDAQLTLAQNVPLAGAVVV STPQDLALIDARRGIAMFNKVDVPVLGIVENMSYFLCPHCGGRSDIFAHGGARAEAERLGVPFLGEVPLHMTIRERADSG KPVVVSEPDSPYAKVYLDIAGQIKAMLEKGRQRVAPKIVIE
Sequences:
>Translated_361_residues MVSDQDVLNALGTVLGPDGKTPLPQSGAIAGLSIKDDKVYLSIAIDPQQAGALEPMRAAAEAVVKKLKGVGNALVSLTAE KQTPPPAPPKPQAPRSIAIPGITHIIAVSSGKGGVGKSTTSVNIALALASLGWKVGILDADIYGPSLPRLLGLKGQPESE GRFMKPLEAFGIKAISIGFMVDEEEPMVWRGPMVMAAVQQLLRDVTWGELDCLVVDMPPGTGDAQLTLAQNVPLAGAVVV STPQDLALIDARRGIAMFNKVDVPVLGIVENMSYFLCPHCGGRSDIFAHGGARAEAERLGVPFLGEVPLHMTIRERADSG KPVVVSEPDSPYAKVYLDIAGQIKAMLEKGRQRVAPKIVIE >Mature_361_residues MVSDQDVLNALGTVLGPDGKTPLPQSGAIAGLSIKDDKVYLSIAIDPQQAGALEPMRAAAEAVVKKLKGVGNALVSLTAE KQTPPPAPPKPQAPRSIAIPGITHIIAVSSGKGGVGKSTTSVNIALALASLGWKVGILDADIYGPSLPRLLGLKGQPESE GRFMKPLEAFGIKAISIGFMVDEEEPMVWRGPMVMAAVQQLLRDVTWGELDCLVVDMPPGTGDAQLTLAQNVPLAGAVVV STPQDLALIDARRGIAMFNKVDVPVLGIVENMSYFLCPHCGGRSDIFAHGGARAEAERLGVPFLGEVPLHMTIRERADSG KPVVVSEPDSPYAKVYLDIAGQIKAMLEKGRQRVAPKIVIE
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI157384956, Length=253, Percent_Identity=55.7312252964427, Blast_Score=291, Evalue=7e-79, Organism=Homo sapiens, GI6912540, Length=254, Percent_Identity=44.0944881889764, Blast_Score=194, Evalue=8e-50, Organism=Homo sapiens, GI118572611, Length=256, Percent_Identity=40.625, Blast_Score=189, Evalue=4e-48, Organism=Escherichia coli, GI87082045, Length=343, Percent_Identity=45.7725947521866, Blast_Score=285, Evalue=3e-78, Organism=Caenorhabditis elegans, GI25143050, Length=282, Percent_Identity=39.0070921985816, Blast_Score=187, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6322188, Length=261, Percent_Identity=38.6973180076628, Blast_Score=201, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6321347, Length=269, Percent_Identity=38.6617100371747, Blast_Score=177, Evalue=2e-45, Organism=Drosophila melanogaster, GI221511043, Length=259, Percent_Identity=40.5405405405405, Blast_Score=221, Evalue=8e-58, Organism=Drosophila melanogaster, GI24667611, Length=254, Percent_Identity=41.7322834645669, Blast_Score=193, Evalue=1e-49, Organism=Drosophila melanogaster, GI19921440, Length=233, Percent_Identity=39.0557939914163, Blast_Score=150, Evalue=9e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR002744 - InterPro: IPR000808 - InterPro: IPR000392 [H]
Pfam domain/function: PF01883 DUF59; PF00142 Fer4_NifH; PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 37932; Mature: 37932
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSDQDVLNALGTVLGPDGKTPLPQSGAIAGLSIKDDKVYLSIAIDPQQAGALEPMRAAA CCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCEEEEEEEECHHHCCCCCHHHHHH EAVVKKLKGVGNALVSLTAEKQTPPPAPPKPQAPRSIAIPGITHIIAVSSGKGGVGKSTT HHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCEEECCCEEEEEEEECCCCCCCCCCC SVNIALALASLGWKVGILDADIYGPSLPRLLGLKGQPESEGRFMKPLEAFGIKAISIGFM EEEEEEEEECCCEEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHCEEEEEEEEE VDEEEPMVWRGPMVMAAVQQLLRDVTWGELDCLVVDMPPGTGDAQLTLAQNVPLAGAVVV EECCCCCEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCCEEEEE STPQDLALIDARRGIAMFNKVDVPVLGIVENMSYFLCPHCGGRSDIFAHGGARAEAERLG ECCCCEEEEECCCCEEEEECCCCCCEEHHHCCCEEECCCCCCCCCEEECCCCCCHHHHCC VPFLGEVPLHMTIRERADSGKPVVVSEPDSPYAKVYLDIAGQIKAMLEKGRQRVAPKIVI CCEECCCCEEEEEEHHCCCCCEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHCCCEEEE E C >Mature Secondary Structure MVSDQDVLNALGTVLGPDGKTPLPQSGAIAGLSIKDDKVYLSIAIDPQQAGALEPMRAAA CCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCEEEEEEEECHHHCCCCCHHHHHH EAVVKKLKGVGNALVSLTAEKQTPPPAPPKPQAPRSIAIPGITHIIAVSSGKGGVGKSTT HHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCEEECCCEEEEEEEECCCCCCCCCCC SVNIALALASLGWKVGILDADIYGPSLPRLLGLKGQPESEGRFMKPLEAFGIKAISIGFM EEEEEEEEECCCEEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHCEEEEEEEEE VDEEEPMVWRGPMVMAAVQQLLRDVTWGELDCLVVDMPPGTGDAQLTLAQNVPLAGAVVV EECCCCCEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCCEEEEE STPQDLALIDARRGIAMFNKVDVPVLGIVENMSYFLCPHCGGRSDIFAHGGARAEAERLG ECCCCEEEEECCCCEEEEECCCCCCEEHHHCCCEEECCCCCCCCCEEECCCCCCHHHHCC VPFLGEVPLHMTIRERADSGKPVVVSEPDSPYAKVYLDIAGQIKAMLEKGRQRVAPKIVI CCEECCCCEEEEEEHHCCCCCEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHCCCEEEE E C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]