Definition Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome.
Accession NC_010581
Length 4,170,153

Click here to switch to the map view.

The map label for this gene is 182678760

Identifier: 182678760

GI number: 182678760

Start: 2027924

End: 2028424

Strand: Reverse

Name: 182678760

Synonym: Bind_1789

Alternate gene names: NA

Gene position: 2028424-2027924 (Counterclockwise)

Preceding gene: 182678761

Following gene: 182678757

Centisome position: 48.64

GC content: 59.68

Gene sequence:

>501_bases
ATGGTGAATGGGCCGCGCCAACGGGTCTGGCCACGTTTGACGTGGCTTCGGGAGCCACATTTGCGCCTGGCGACGCGGCC
GATCGAATCCGACGCCGCGATCTCACTGACAGAGAAACAAGGCTCGGAAGCGCGATCGACACCCTGGAGTATGCTGCTCG
TCGTCTTTATGCGGCTTCTGGCCATGATTTGGATGGCGCAAGGTCTGGCGCAATGGGCCACGGTTTTGGTGCCGAGTGCG
CCCGCATTCGATCACGAGAGTTGGATTTTTGGCGCGGGAGTCATCTTCTTTGCGGTTTTTGATCTCATGGCGGCGGTCGG
CCTCTGGCTCGCGACGCCCTGGGGCGGAGTGTTGTGGCTGCTTGCAGCGCTCGCCCAGATTTGCATGGCCCTGTTGGTGC
GGCCATTCTTTTCGCTTCTTTGGGTTGGCGCCAATCTGTTTCTGATCTGCCTCTATTTCATCCTGACATGGTTTGCCGGT
CAGGCCGAGAGCGCAGACTGA

Upstream 100 bases:

>100_bases
AGGACATCGAGGCCTTAAAACCTGCCGATGTCGAGCCCTATTTCGCGGCCTTGCCCGAGGGTGAGGCGGATCTGACCTTC
GCTGTCGAGGCCTAGGGCTT

Downstream 100 bases:

>100_bases
AGCGGTGACTGCGCCATCGGCAGGTTCGAGGATGCCCGAGCTATCGCTGGCATCCTCTTGTCTGTTTTGGCTTTGCCCTC
AACCGGCTTTTGGTTGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MVNGPRQRVWPRLTWLREPHLRLATRPIESDAAISLTEKQGSEARSTPWSMLLVVFMRLLAMIWMAQGLAQWATVLVPSA
PAFDHESWIFGAGVIFFAVFDLMAAVGLWLATPWGGVLWLLAALAQICMALLVRPFFSLLWVGANLFLICLYFILTWFAG
QAESAD

Sequences:

>Translated_166_residues
MVNGPRQRVWPRLTWLREPHLRLATRPIESDAAISLTEKQGSEARSTPWSMLLVVFMRLLAMIWMAQGLAQWATVLVPSA
PAFDHESWIFGAGVIFFAVFDLMAAVGLWLATPWGGVLWLLAALAQICMALLVRPFFSLLWVGANLFLICLYFILTWFAG
QAESAD
>Mature_166_residues
MVNGPRQRVWPRLTWLREPHLRLATRPIESDAAISLTEKQGSEARSTPWSMLLVVFMRLLAMIWMAQGLAQWATVLVPSA
PAFDHESWIFGAGVIFFAVFDLMAAVGLWLATPWGGVLWLLAALAQICMALLVRPFFSLLWVGANLFLICLYFILTWFAG
QAESAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18621; Mature: 18621

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNGPRQRVWPRLTWLREPHLRLATRPIESDAAISLTEKQGSEARSTPWSMLLVVFMRLL
CCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCEEEHHHCCCCCCCCHHHHHHHHHHHHH
AMIWMAQGLAQWATVLVPSAPAFDHESWIFGAGVIFFAVFDLMAAVGLWLATPWGGVLWL
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LAALAQICMALLVRPFFSLLWVGANLFLICLYFILTWFAGQAESAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MVNGPRQRVWPRLTWLREPHLRLATRPIESDAAISLTEKQGSEARSTPWSMLLVVFMRLL
CCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCEEEHHHCCCCCCCCHHHHHHHHHHHHH
AMIWMAQGLAQWATVLVPSAPAFDHESWIFGAGVIFFAVFDLMAAVGLWLATPWGGVLWL
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LAALAQICMALLVRPFFSLLWVGANLFLICLYFILTWFAGQAESAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA