| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
Click here to switch to the map view.
The map label for this gene is 182678751
Identifier: 182678751
GI number: 182678751
Start: 2019127
End: 2019882
Strand: Reverse
Name: 182678751
Synonym: Bind_1780
Alternate gene names: NA
Gene position: 2019882-2019127 (Counterclockwise)
Preceding gene: 182678752
Following gene: 182678750
Centisome position: 48.44
GC content: 55.69
Gene sequence:
>756_bases ATGCCGATTCTCGATGTCGCCAATCCTCTCTCCTTTTTTAAGGGCATGAACGGCACTTTTGCCGATGTGATCATGGTTGA ACGGGACAAGGATGATTTTCTGGAAAAGCTTCTGCCCAAGGCTTTCACGACCTTCGATCTGTCCGTCGATGCTTGTGCGC AAGGCATGGGGGCTTTGGCATGCCGGGGTGGCTGCGCAAGCTGTTGTACGATTCGGGTGGCTGCCACCGCGCCGGAAATT CTGCATATAGCCCGGCATCTGCGGGCATTGAGCGAAACGCAGGACAAAGCGACCTGGACTCAGGATTTGCTGCAAAGGCT GCATGAAGCCAATGATACGACACATGGGCTGGGGGAACAGGACCGCATGGAACAGGGCGTGGTCTGTCCCTTCATCGAAG AGGGTCTCTGTGTGATCTATGCCCAAAGACCGCTTGCTTGCCGGGGCCATGCTTCCTTCTCCGAGAAAGCCTGCGTCGAA GCGCTGAATGGCGAGGAGATCGCCGTACCCGTTTCTTCGCTGCATTTGACCGTGCGCAGCCTCATTCAGAATTCTCTGCA ATCGGCGCTCCGCGATGCCGATCTCGGATGGGGTATCTATGAGTTGAATCAAGCCCTGGAAATTGCCTTGAAACAGCCGG ATATCGAAGCCGAATGGCTGGCTGGGAAGGATGTTTTCGCTTCGGCCATGATTATGGATGTCAGCCCGGACGAAATGGCT GAAACCTTCGAGGCGATCAAGGCCATGGCGGCGTGA
Upstream 100 bases:
>100_bases ATTTCAGCCACAGCGGATCCCGTTTCGCGACGAAGCCCGTCAGCAACTCATGTTTTCATGCGGACCGAAGAGTCCGCTCG GTCCTTGAGAGGAGTGAACC
Downstream 100 bases:
>100_bases CCTGATACGGCCGGTTATCAAGCAAGAATGCCCTTGCGCGCTTGTGGATTGACCGAAACGAAAGAGCCTATAGATGGCTT TTTGTTTTGGTCTCTGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MPILDVANPLSFFKGMNGTFADVIMVERDKDDFLEKLLPKAFTTFDLSVDACAQGMGALACRGGCASCCTIRVAATAPEI LHIARHLRALSETQDKATWTQDLLQRLHEANDTTHGLGEQDRMEQGVVCPFIEEGLCVIYAQRPLACRGHASFSEKACVE ALNGEEIAVPVSSLHLTVRSLIQNSLQSALRDADLGWGIYELNQALEIALKQPDIEAEWLAGKDVFASAMIMDVSPDEMA ETFEAIKAMAA
Sequences:
>Translated_251_residues MPILDVANPLSFFKGMNGTFADVIMVERDKDDFLEKLLPKAFTTFDLSVDACAQGMGALACRGGCASCCTIRVAATAPEI LHIARHLRALSETQDKATWTQDLLQRLHEANDTTHGLGEQDRMEQGVVCPFIEEGLCVIYAQRPLACRGHASFSEKACVE ALNGEEIAVPVSSLHLTVRSLIQNSLQSALRDADLGWGIYELNQALEIALKQPDIEAEWLAGKDVFASAMIMDVSPDEMA ETFEAIKAMAA >Mature_250_residues PILDVANPLSFFKGMNGTFADVIMVERDKDDFLEKLLPKAFTTFDLSVDACAQGMGALACRGGCASCCTIRVAATAPEIL HIARHLRALSETQDKATWTQDLLQRLHEANDTTHGLGEQDRMEQGVVCPFIEEGLCVIYAQRPLACRGHASFSEKACVEA LNGEEIAVPVSSLHLTVRSLIQNSLQSALRDADLGWGIYELNQALEIALKQPDIEAEWLAGKDVFASAMIMDVSPDEMAE TFEAIKAMAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27331; Mature: 27199
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: PS00028 ZINC_FINGER_C2H2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPILDVANPLSFFKGMNGTFADVIMVERDKDDFLEKLLPKAFTTFDLSVDACAQGMGALA CCCCCCCCHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHH CRGGCASCCTIRVAATAPEILHIARHLRALSETQDKATWTQDLLQRLHEANDTTHGLGEQ HCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH DRMEQGVVCPFIEEGLCVIYAQRPLACRGHASFSEKACVEALNGEEIAVPVSSLHLTVRS HHHHCCCCCCHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHH LIQNSLQSALRDADLGWGIYELNQALEIALKQPDIEAEWLAGKDVFASAMIMDVSPDEMA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHEEECCHHHHH ETFEAIKAMAA HHHHHHHHHCC >Mature Secondary Structure PILDVANPLSFFKGMNGTFADVIMVERDKDDFLEKLLPKAFTTFDLSVDACAQGMGALA CCCCCCCHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHH CRGGCASCCTIRVAATAPEILHIARHLRALSETQDKATWTQDLLQRLHEANDTTHGLGEQ HCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH DRMEQGVVCPFIEEGLCVIYAQRPLACRGHASFSEKACVEALNGEEIAVPVSSLHLTVRS HHHHCCCCCCHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHH LIQNSLQSALRDADLGWGIYELNQALEIALKQPDIEAEWLAGKDVFASAMIMDVSPDEMA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHEEECCHHHHH ETFEAIKAMAA HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA