| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is pcm [H]
Identifier: 182678699
GI number: 182678699
Start: 1954038
End: 1954775
Strand: Reverse
Name: pcm [H]
Synonym: Bind_1726
Alternate gene names: 182678699
Gene position: 1954775-1954038 (Counterclockwise)
Preceding gene: 182678705
Following gene: 182678698
Centisome position: 46.88
GC content: 60.43
Gene sequence:
>738_bases ATGCCAGCCACTTCCCTGGCCGAACCTGTCTCCCCCATCGCTCCGGCTGGTGGGGACCAATCGGCTTTCTTGCGCCAGAC CATGGTCGATTGCCAGGTGCGGACGTTCGATGTCACCGACCAGCGGCTTCTTGAAAGAATGCTCGAGGTCCCGCGCGAGA GTTTCCTGCCGGCTTCCCTGGCCCCGGTCGCTTATTCGGATAAGGTTTTGCGTCTAGCCCCGACGCATCCGGCTGGCGCT GAGCGTCACTTGTTGCCGCCCCTGATTCTTGCCCGTCTCATCCAGGGCGCGCAGGTCACGCCCAACGACCATGTTCTCGA TATTGCGTCGGGCTCTGGCTATTCCACGGCGCTTCTCGCCGGCCTTGCCCATGATGTCGTGGCGCTTGAATCCGAACCGG AATGGGCCGCTTTCACCCGTAACGCCATCGCGGCTCATGGCCTTCAGACGGTATCCGTCGTCGAGGGGCCGCTAGCGGAA GGTGTACCCGCACAAGCTCCGTTCGATTTGATTCTCATCAATGGTGCCGTCGAAGCCCAACTCGAAACCCTCTTTGCGCA ATTGCAGGAGGGAGGCCGTCTCCTGGCTCTCACTTACGAGGAGAACGACCCGACCAAGCGCGCGGGCAAGGCGGTTCGAT TCGAGAAAATCGGCGGCGAAATCAGCCAACGCACGCTGTTTGATTTTTCTCTTCCAGTCCTTGAGGCCTTTGCGCGCGCG GAACAGTTCAAATTCTAG
Upstream 100 bases:
>100_bases TCTCTTCGCCAAGGTGCCGAAACCTGCCTGTTGGTCCTACCTCGTCGATCCTGCTGTCTTGATCCTTGGGTCATTGATCT CGCCGCTACAGGAGTTTTTC
Downstream 100 bases:
>100_bases AATGTCTTCCCGATTTGTTGAATCGGGAAAAGATTTTGTCCGTTGAATGAGCGTGTTTTCAAGACCGGAGTGAAGAGGCT TCGTTTGAAAATGCGCTCTT
Product: protein-L-isoaspartate(D-aspartate) O-methyltransferase
Products: NA
Alternate protein names: L-isoaspartyl protein carboxyl methyltransferase; Protein L-isoaspartyl methyltransferase; Protein-beta-aspartate methyltransferase; PIMT [H]
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MPATSLAEPVSPIAPAGGDQSAFLRQTMVDCQVRTFDVTDQRLLERMLEVPRESFLPASLAPVAYSDKVLRLAPTHPAGA ERHLLPPLILARLIQGAQVTPNDHVLDIASGSGYSTALLAGLAHDVVALESEPEWAAFTRNAIAAHGLQTVSVVEGPLAE GVPAQAPFDLILINGAVEAQLETLFAQLQEGGRLLALTYEENDPTKRAGKAVRFEKIGGEISQRTLFDFSLPVLEAFARA EQFKF
Sequences:
>Translated_245_residues MPATSLAEPVSPIAPAGGDQSAFLRQTMVDCQVRTFDVTDQRLLERMLEVPRESFLPASLAPVAYSDKVLRLAPTHPAGA ERHLLPPLILARLIQGAQVTPNDHVLDIASGSGYSTALLAGLAHDVVALESEPEWAAFTRNAIAAHGLQTVSVVEGPLAE GVPAQAPFDLILINGAVEAQLETLFAQLQEGGRLLALTYEENDPTKRAGKAVRFEKIGGEISQRTLFDFSLPVLEAFARA EQFKF >Mature_244_residues PATSLAEPVSPIAPAGGDQSAFLRQTMVDCQVRTFDVTDQRLLERMLEVPRESFLPASLAPVAYSDKVLRLAPTHPAGAE RHLLPPLILARLIQGAQVTPNDHVLDIASGSGYSTALLAGLAHDVVALESEPEWAAFTRNAIAAHGLQTVSVVEGPLAEG VPAQAPFDLILINGAVEAQLETLFAQLQEGGRLLALTYEENDPTKRAGKAVRFEKIGGEISQRTLFDFSLPVLEAFARAE QFKF
Specific function: Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins [H]
COG id: COG2518
COG function: function code O; Protein-L-isoaspartate carboxylmethyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. L- isoaspartyl/D-aspartyl protein methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1789100, Length=187, Percent_Identity=32.0855614973262, Blast_Score=83, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000682 [H]
Pfam domain/function: PF01135 PCMT [H]
EC number: =2.1.1.77 [H]
Molecular weight: Translated: 26330; Mature: 26199
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPATSLAEPVSPIAPAGGDQSAFLRQTMVDCQVRTFDVTDQRLLERMLEVPRESFLPASL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCEEEEECCCHHHHHHHHHHCCHHHCCCCCC APVAYSDKVLRLAPTHPAGAERHLLPPLILARLIQGAQVTPNDHVLDIASGSGYSTALLA CCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHH GLAHDVVALESEPEWAAFTRNAIAAHGLQTVSVVEGPLAEGVPAQAPFDLILINGAVEAQ HHHHHHEEECCCCCHHHHHHHHHHHHCCHHHHHHCCCHHCCCCCCCCEEEEEECCHHHHH LETLFAQLQEGGRLLALTYEENDPTKRAGKAVRFEKIGGEISQRTLFDFSLPVLEAFARA HHHHHHHHHCCCEEEEEEECCCCCHHHHCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHH EQFKF HHCCC >Mature Secondary Structure PATSLAEPVSPIAPAGGDQSAFLRQTMVDCQVRTFDVTDQRLLERMLEVPRESFLPASL CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCEEEEECCCHHHHHHHHHHCCHHHCCCCCC APVAYSDKVLRLAPTHPAGAERHLLPPLILARLIQGAQVTPNDHVLDIASGSGYSTALLA CCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHH GLAHDVVALESEPEWAAFTRNAIAAHGLQTVSVVEGPLAEGVPAQAPFDLILINGAVEAQ HHHHHHEEECCCCCHHHHHHHHHHHHCCHHHHHHCCCHHCCCCCCCCEEEEEECCHHHHH LETLFAQLQEGGRLLALTYEENDPTKRAGKAVRFEKIGGEISQRTLFDFSLPVLEAFARA HHHHHHHHHCCCEEEEEEECCCCCHHHHCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHH EQFKF HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA