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The map label for this gene is bepC [H]

Identifier: 182678698

GI number: 182678698

Start: 1951672

End: 1953141

Strand: Reverse

Name: bepC [H]

Synonym: Bind_1725

Alternate gene names: 182678698

Gene position: 1953141-1951672 (Counterclockwise)

Preceding gene: 182678699

Following gene: 182678697

Centisome position: 46.84

GC content: 56.39

Gene sequence:

>1470_bases
ATGCCTCACATTGAACTTCGACGCAAAGCAGCTCTTTCCAGTACACGGGGCAAGCGTGATCGCGGATCGCTGTCATCGCG
CAAGCTGCCGCATTATATGGCTGGTCTCGGCTTGGCCATAGGCCAGCTTCTCGCTTCTCCTTCCGCCATGGCGGAGAGTA
TGTCGAGCGCCTTGGCCAAGGCCTATACTAACAACCCAGATATGAATCAGGAACGTGCGTCGGTTCGTGCCGCTGATGAG
GCTTTGCCTCAGGCCACCGCTGGCTGGCGGCCGAATGTCAGTGCGTCCGGTTCTTACGGCTATAATCACCTTTATTCACA
TCTGCCGACCGCTGGTACGGTCTTCAGCGGCACTTACAATGTCGATGTTGGGCAGGTTGGTGTTACTGCGACTCAGAATC
TTTTCAACGGCAACCGGACGCTCAATACGGTGCGTCAGGCAGAGTCGAATATTCTGGGCGCGCGCGAGGGGATGCGCAAT
ACAGAGCAGAATATTCTGCAATTTGGTGCCACGGCTTACATGAATGTGCTGCGCGATACGGCCATTCTCAATCTGCGGCG
CAATAATATTATTGTGCTCGAGGAGCAATTGCGCCAGACGCGCGATCGTTTCAATGTCGGTGAAGTGACGAAAACCGATG
TCGCGCAATCTGAATCGAGCCTCGCCTCAGCGCGATCGGATTATTTTGCAGCGCAGGCCAATCTGCAGACAAATATCGCC
AATTACCGTCAGATCATCGGCGTCGAGCCCAAAAAGCTGGAGCCCGCCGCGACGATCGAGAAACTATTGCCCCGCAACGT
GGACGCGGCCATAGATCTTGCCATGGCCGAACATCCGGCGGTGCAGGCGGCCCTTCATTCTGTGGACGCGGCCCAGGCTC
AGGTCAAGATTGCCGAGGGCGCGCTCTATCCAAAAGTCGATTTTGTCGCTTCGACGCAGCGTGTTTTCAATAATAACGGT
ATTCCGGGCTATCCAAGCTTCAACGCTTCGGTCGTAGGCCAGGTCACTGTCCCGCTTTACGAAAATGGCGGCGCGACCTA
TTCGCAGATTCGCCAAGCCAAGGAAAGACTCGGCCAAGCCCAATTGCAGGCCGATTTGCAGCGGACACAAGTGAGGGCCT
CTGTGGTCTCCAGTTGGAGCCAGCTCGAGACGGCGAAAGCGGTCATTCAATCGTCTCTCGCCGCGGTCAAAGCAGCGGAA
ATCGCTCTGAACGGCGTTCGGGAAGAGGCGAGGGTCGGTCAGCGCACGACGCTTGATGTCCTCAACGCACAGCAATTCCT
GCTTAACACCCGGGTGAGCCTCGTGACCGCTCAGCGTGACCGAGTCGTCGCATCCTACGTCGTCATGTCGACCGTGGGTA
AGTTGACTGCGGCCAATCTGCATCTGTCCGTCGTAGAATATGATCCGACTGTTCATTTCGAGCAGATCAAGGATAAATGG
ATCGGTGTCCGCACGCCTGACGGACGCTGA

Upstream 100 bases:

>100_bases
TGATGGGTTCATGGGAAGGCAGATATGGTAAGTGGAGATCTGGGATTGATTCCCGAATCCAGAGAGCCAGATTACAGCGG
GATGGGATCGGGCTTGCGTA

Downstream 100 bases:

>100_bases
TTCAGCGATCGCTTAACTGATTCTCGCCGTATATCCGTCAAGATTTACCTTATCAACCGGAAGAAAGAGGCGTGTTTCAT
TTTGATTCATGCCTTTTAGC

Product: TolC family type I secretion outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 489; Mature: 488

Protein sequence:

>489_residues
MPHIELRRKAALSSTRGKRDRGSLSSRKLPHYMAGLGLAIGQLLASPSAMAESMSSALAKAYTNNPDMNQERASVRAADE
ALPQATAGWRPNVSASGSYGYNHLYSHLPTAGTVFSGTYNVDVGQVGVTATQNLFNGNRTLNTVRQAESNILGAREGMRN
TEQNILQFGATAYMNVLRDTAILNLRRNNIIVLEEQLRQTRDRFNVGEVTKTDVAQSESSLASARSDYFAAQANLQTNIA
NYRQIIGVEPKKLEPAATIEKLLPRNVDAAIDLAMAEHPAVQAALHSVDAAQAQVKIAEGALYPKVDFVASTQRVFNNNG
IPGYPSFNASVVGQVTVPLYENGGATYSQIRQAKERLGQAQLQADLQRTQVRASVVSSWSQLETAKAVIQSSLAAVKAAE
IALNGVREEARVGQRTTLDVLNAQQFLLNTRVSLVTAQRDRVVASYVVMSTVGKLTAANLHLSVVEYDPTVHFEQIKDKW
IGVRTPDGR

Sequences:

>Translated_489_residues
MPHIELRRKAALSSTRGKRDRGSLSSRKLPHYMAGLGLAIGQLLASPSAMAESMSSALAKAYTNNPDMNQERASVRAADE
ALPQATAGWRPNVSASGSYGYNHLYSHLPTAGTVFSGTYNVDVGQVGVTATQNLFNGNRTLNTVRQAESNILGAREGMRN
TEQNILQFGATAYMNVLRDTAILNLRRNNIIVLEEQLRQTRDRFNVGEVTKTDVAQSESSLASARSDYFAAQANLQTNIA
NYRQIIGVEPKKLEPAATIEKLLPRNVDAAIDLAMAEHPAVQAALHSVDAAQAQVKIAEGALYPKVDFVASTQRVFNNNG
IPGYPSFNASVVGQVTVPLYENGGATYSQIRQAKERLGQAQLQADLQRTQVRASVVSSWSQLETAKAVIQSSLAAVKAAE
IALNGVREEARVGQRTTLDVLNAQQFLLNTRVSLVTAQRDRVVASYVVMSTVGKLTAANLHLSVVEYDPTVHFEQIKDKW
IGVRTPDGR
>Mature_488_residues
PHIELRRKAALSSTRGKRDRGSLSSRKLPHYMAGLGLAIGQLLASPSAMAESMSSALAKAYTNNPDMNQERASVRAADEA
LPQATAGWRPNVSASGSYGYNHLYSHLPTAGTVFSGTYNVDVGQVGVTATQNLFNGNRTLNTVRQAESNILGAREGMRNT
EQNILQFGATAYMNVLRDTAILNLRRNNIIVLEEQLRQTRDRFNVGEVTKTDVAQSESSLASARSDYFAAQANLQTNIAN
YRQIIGVEPKKLEPAATIEKLLPRNVDAAIDLAMAEHPAVQAALHSVDAAQAQVKIAEGALYPKVDFVASTQRVFNNNGI
PGYPSFNASVVGQVTVPLYENGGATYSQIRQAKERLGQAQLQADLQRTQVRASVVSSWSQLETAKAVIQSSLAAVKAAEI
ALNGVREEARVGQRTTLDVLNAQQFLLNTRVSLVTAQRDRVVASYVVMSTVGKLTAANLHLSVVEYDPTVHFEQIKDKWI
GVRTPDGR

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI87082199, Length=427, Percent_Identity=25.2927400468384, Blast_Score=94, Evalue=2e-20,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 53057; Mature: 52926

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHIELRRKAALSSTRGKRDRGSLSSRKLPHYMAGLGLAIGQLLASPSAMAESMSSALAK
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AYTNNPDMNQERASVRAADEALPQATAGWRPNVSASGSYGYNHLYSHLPTAGTVFSGTYN
HHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEECCEEE
VDVGQVGVTATQNLFNGNRTLNTVRQAESNILGAREGMRNTEQNILQFGATAYMNVLRDT
CCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AILNLRRNNIIVLEEQLRQTRDRFNVGEVTKTDVAQSESSLASARSDYFAAQANLQTNIA
HHEEECCCCEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
NYRQIIGVEPKKLEPAATIEKLLPRNVDAAIDLAMAEHPAVQAALHSVDAAQAQVKIAEG
HHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHEEEECC
ALYPKVDFVASTQRVFNNNGIPGYPSFNASVVGQVTVPLYENGGATYSQIRQAKERLGQA
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHH
QLQADLQRTQVRASVVSSWSQLETAKAVIQSSLAAVKAAEIALNGVREEARVGQRTTLDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LNAQQFLLNTRVSLVTAQRDRVVASYVVMSTVGKLTAANLHLSVVEYDPTVHFEQIKDKW
HHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHEECCEEEEEEEECCCCHHHHHHHHH
IGVRTPDGR
CCCCCCCCC
>Mature Secondary Structure 
PHIELRRKAALSSTRGKRDRGSLSSRKLPHYMAGLGLAIGQLLASPSAMAESMSSALAK
CCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AYTNNPDMNQERASVRAADEALPQATAGWRPNVSASGSYGYNHLYSHLPTAGTVFSGTYN
HHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEECCEEE
VDVGQVGVTATQNLFNGNRTLNTVRQAESNILGAREGMRNTEQNILQFGATAYMNVLRDT
CCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AILNLRRNNIIVLEEQLRQTRDRFNVGEVTKTDVAQSESSLASARSDYFAAQANLQTNIA
HHEEECCCCEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
NYRQIIGVEPKKLEPAATIEKLLPRNVDAAIDLAMAEHPAVQAALHSVDAAQAQVKIAEG
HHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHEEEECC
ALYPKVDFVASTQRVFNNNGIPGYPSFNASVVGQVTVPLYENGGATYSQIRQAKERLGQA
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHH
QLQADLQRTQVRASVVSSWSQLETAKAVIQSSLAAVKAAEIALNGVREEARVGQRTTLDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LNAQQFLLNTRVSLVTAQRDRVVASYVVMSTVGKLTAANLHLSVVEYDPTVHFEQIKDKW
HHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHEECCEEEEEEEECCCCHHHHHHHHH
IGVRTPDGR
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]