| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is hit [H]
Identifier: 182678640
GI number: 182678640
Start: 1884961
End: 1885389
Strand: Direct
Name: hit [H]
Synonym: Bind_1666
Alternate gene names: 182678640
Gene position: 1884961-1885389 (Clockwise)
Preceding gene: 182678639
Following gene: 182678644
Centisome position: 45.2
GC content: 58.04
Gene sequence:
>429_bases ATGAGCACTCCGGCCTACGACGAGAACAATATTTTCGCCAAAATTCTGCGCGGCGAAATGCCGTGCACCAAGGTCTATGA GGATGACGTAGCACTCGCCTTCATGGACATCATGCCGCGCGCCGACGGCCATGTGCTGGTCATCCCCAAGAAAGCTGGCC GCAATCTTCTCGATATAGACGCCGAGGCCCTCGCCCAATTGATGCCACGTGTGCAGAAAGTGGCGCGCGCCGTCAAAAAG GCCGTCGCCGCGGATGGCATCACGCTGCATCAATATAATGAAAGCGCGGGCGGACAGGTCATTTTCCACCTGCATTTCCA TATTCTGCCACGCTGGGCAGGCGTGGAATTGCGGCCGCATACAGGAGAAATGGCCAAGCCAGAGGCTTTGGCGGCGCTTG CGGAAAAGATCATCGCCGCGCTGGCCTGA
Upstream 100 bases:
>100_bases CATAGAGCAATATGGCGAACAGACCCCCTTCAAGAAGGGACCTTGACCCTCATCCATTCCTGGCCGATGTCTTTCCATCA TCGACCATGCGAGGAAGCGG
Downstream 100 bases:
>100_bases ACAAGCGTGCCCAGATGGATGCCTAAAAATACAAAGCCGGCGCTTGCCTGAGCAAGCGCCGGCTTTGTTTGTCCGCGAGC TCCCCTTAAGGAAGCCCGCG
Product: histidine triad (HIT) protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MSTPAYDENNIFAKILRGEMPCTKVYEDDVALAFMDIMPRADGHVLVIPKKAGRNLLDIDAEALAQLMPRVQKVARAVKK AVAADGITLHQYNESAGGQVIFHLHFHILPRWAGVELRPHTGEMAKPEALAALAEKIIAALA
Sequences:
>Translated_142_residues MSTPAYDENNIFAKILRGEMPCTKVYEDDVALAFMDIMPRADGHVLVIPKKAGRNLLDIDAEALAQLMPRVQKVARAVKK AVAADGITLHQYNESAGGQVIFHLHFHILPRWAGVELRPHTGEMAKPEALAALAEKIIAALA >Mature_141_residues STPAYDENNIFAKILRGEMPCTKVYEDDVALAFMDIMPRADGHVLVIPKKAGRNLLDIDAEALAQLMPRVQKVARAVKKA VAADGITLHQYNESAGGQVIFHLHFHILPRWAGVELRPHTGEMAKPEALAALAEKIIAALA
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HIT domain [H]
Homologues:
Organism=Homo sapiens, GI4885413, Length=109, Percent_Identity=39.4495412844037, Blast_Score=66, Evalue=9e-12, Organism=Escherichia coli, GI1787346, Length=105, Percent_Identity=38.0952380952381, Blast_Score=67, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17506713, Length=105, Percent_Identity=40.9523809523809, Blast_Score=74, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6320078, Length=112, Percent_Identity=40.1785714285714, Blast_Score=81, Evalue=6e-17, Organism=Drosophila melanogaster, GI28574010, Length=110, Percent_Identity=43.6363636363636, Blast_Score=79, Evalue=9e-16, Organism=Drosophila melanogaster, GI24581222, Length=111, Percent_Identity=42.3423423423423, Blast_Score=79, Evalue=9e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011146 - InterPro: IPR011151 - InterPro: IPR019808 - InterPro: IPR001310 [H]
Pfam domain/function: PF01230 HIT [H]
EC number: NA
Molecular weight: Translated: 15519; Mature: 15388
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPAYDENNIFAKILRGEMPCTKVYEDDVALAFMDIMPRADGHVLVIPKKAGRNLLDID CCCCCCCCCCHHHHHHHCCCCCCHHHHCHHHHHHHHHCCCCCCCEEEEECCCCCCEEECC AEALAQLMPRVQKVARAVKKAVAADGITLHQYNESAGGQVIFHLHFHILPRWAGVELRPH HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEEEEEECCCCCCEECCC TGEMAKPEALAALAEKIIAALA CCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure STPAYDENNIFAKILRGEMPCTKVYEDDVALAFMDIMPRADGHVLVIPKKAGRNLLDID CCCCCCCCCHHHHHHHCCCCCCHHHHCHHHHHHHHHCCCCCCCEEEEECCCCCCEEECC AEALAQLMPRVQKVARAVKKAVAADGITLHQYNESAGGQVIFHLHFHILPRWAGVELRPH HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEEEEEECCCCCCEECCC TGEMAKPEALAALAEKIIAALA CCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]