| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is ynhA [C]
Identifier: 182678615
GI number: 182678615
Start: 1855543
End: 1855968
Strand: Direct
Name: ynhA [C]
Synonym: Bind_1641
Alternate gene names: 182678615
Gene position: 1855543-1855968 (Clockwise)
Preceding gene: 182678614
Following gene: 182678617
Centisome position: 44.5
GC content: 57.75
Gene sequence:
>426_bases ATGAACCTCGACGAGATCATCGAAAACTTCAACTACCTCGACGAGTGGGAAGACCGCTATCGTTATCTGATCGAACTTGG CAGGACCTTGGAGCCCTTGGACGAGGCCGCCCATAATGATCAGAACAAGGTTTTGGGTTGCGCCAGTCAGGTCTGGCTTG AGACCAATGTCGGCGCTGATGCCTCGGGCGCTCCCGTTCTGAACCTCAAGGGCGATAGCGACGCGCATATTGTGCGCGGT CTCGTCGCTTTGATTTTGGCACTTTATTCCGGCCAGACGGCCAGCAAGATCATCGATACGGACGCCCAGGAACTGTTCAA GAGTCTGGGTCTTTCCGCTCATCTGACGCCGCAGCGGACCAATGGCGTCCGGTCCATGGTCGAGCGGATCAAGAATGACG CGCGCGCCGCAGCCGCTGTCGCCTGA
Upstream 100 bases:
>100_bases ATCTTCAAAGATATCTTTGCCGCCGTTTCTTGTGGCACCTCTCTCCTCATACGCCTATATGATGCGGTAAAGAGAATTAA CTTCGAGCCTTCGGATCGCC
Downstream 100 bases:
>100_bases GCTCATCCTTCCTGTCATACCGTAGAATTAAACCCGAAAAGCCCTGCTTTTCGGGTTTAATAGCTTTTATAAAGGCGCTT ACAACAAAAGCCGCGTCCAT
Product: Fe-S metabolism associated SufE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MNLDEIIENFNYLDEWEDRYRYLIELGRTLEPLDEAAHNDQNKVLGCASQVWLETNVGADASGAPVLNLKGDSDAHIVRG LVALILALYSGQTASKIIDTDAQELFKSLGLSAHLTPQRTNGVRSMVERIKNDARAAAAVA
Sequences:
>Translated_141_residues MNLDEIIENFNYLDEWEDRYRYLIELGRTLEPLDEAAHNDQNKVLGCASQVWLETNVGADASGAPVLNLKGDSDAHIVRG LVALILALYSGQTASKIIDTDAQELFKSLGLSAHLTPQRTNGVRSMVERIKNDARAAAAVA >Mature_141_residues MNLDEIIENFNYLDEWEDRYRYLIELGRTLEPLDEAAHNDQNKVLGCASQVWLETNVGADASGAPVLNLKGDSDAHIVRG LVALILALYSGQTASKIIDTDAQELFKSLGLSAHLTPQRTNGVRSMVERIKNDARAAAAVA
Specific function: Unknown
COG id: COG2166
COG function: function code R; SufE protein probably involved in Fe-S center assembly
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sufE family [H]
Homologues:
Organism=Escherichia coli, GI1787969, Length=123, Percent_Identity=37.3983739837398, Blast_Score=101, Evalue=2e-23, Organism=Escherichia coli, GI1789176, Length=122, Percent_Identity=35.2459016393443, Blast_Score=82, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003808 [H]
Pfam domain/function: PF02657 SufE [H]
EC number: NA
Molecular weight: Translated: 15452; Mature: 15452
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLDEIIENFNYLDEWEDRYRYLIELGRTLEPLDEAAHNDQNKVLGCASQVWLETNVGAD CCHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC ASGAPVLNLKGDSDAHIVRGLVALILALYSGQTASKIIDTDAQELFKSLGLSAHLTPQRT CCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHCCCCCCCCCHHH NGVRSMVERIKNDARAAAAVA HHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNLDEIIENFNYLDEWEDRYRYLIELGRTLEPLDEAAHNDQNKVLGCASQVWLETNVGAD CCHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC ASGAPVLNLKGDSDAHIVRGLVALILALYSGQTASKIIDTDAQELFKSLGLSAHLTPQRT CCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHCCCCCCCCCHHH NGVRSMVERIKNDARAAAAVA HHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7756693; 11481430 [H]