Click here to switch to the map view.

The map label for this gene is ydaM [H]

Identifier: 182678592

GI number: 182678592

Start: 1828215

End: 1829129

Strand: Direct

Name: ydaM [H]

Synonym: Bind_1618

Alternate gene names: 182678592

Gene position: 1828215-1829129 (Clockwise)

Preceding gene: 182678591

Following gene: 182678594

Centisome position: 43.84

GC content: 53.88

Gene sequence:

>915_bases
ATGACGCATTACGTATCGGTGGTAATACCTTGCTATAATGCAGCCAATACCATCGGTGAATGTCTGTCTTCGCTGGAAGC
ACAAACCTATCCGCGCGAATTCTATGAGATTATCGTGGCGGATAATGGTTCGACGGATGGCTGCCTCGATTTAATCCGTC
AAAAGTTTCCACAAGTCCGCATCGTTCAAGCAGTCCAGAAGGGCTCCGGCTATGCGCGCAATGCCGGGATTGAAGCCGCG
GAAGGACAACTGATCGCGAGTATCGATGCAGATTGTGTGGCGGACTCCAAATGGATCGCAACTTTGGTCGAAGCGATCGA
AAGGGTATCGGACGAGGTCGCGGCGATCGGCGGGATGATCGAGCCTTATTCCTACAAAACGACCATCGAACATTTCGAGG
ATTTCTGGATCAAGCAGGAAAATTTGCGCCAGGGCAAAGGTCTCGTGCGCTATGCCGAAACGCCCAATGCTATTTTCCGC
ATTGGTCCCTTACGCGTCATGGGGGGATTTGACGGAACCATGGGTTTCGATGACGCGGATCTCGGCATCAGGCTCCAAAA
GGCTGGTTTCCGGATCGAGTTTGCGCCCGGCGCCATCGTCAAGCACCGTAATCCCTCCACTTGGCATGAATTGTTTCGGC
ACCGCCGTAAATATGGCGCGTTCAATTTCAAGCTGGCGCAAAAATATCCGGAATTATTGGGCGATGTCACAGATCCGCGA
ACCGCGCGGCGCGTCCAATTGGAAACGATCAGACGTGTCTGTGGCGGAATCGTCATCAAGTTTCCCCTCGCCTTGCTGAC
AAAGTGGGATAAGCCTTCGCGTTTGTGGCCCCTCGCCGATGCCGTCGCGGCCCTCGCCAATTATCTTGGCTACCGCGACG
CCTATGTGGCGTTTCAACGCTCTTCTCACCACTGA

Upstream 100 bases:

>100_bases
TATCTGATTTTATCTTTGGATCTGAGCCATTGGAATCCATGTATACTTTTTTCTTTAAATAAAAAGATAATTTACGGCGT
AATTCTCGTGAGGAATCGTA

Downstream 100 bases:

>100_bases
CAGAACTTGGCTAACCCAGCTTGAACCATAAGGTGGCGATGCCGAGAAAAGAGAAGAAACCAACGACATCGGTGACCGTC
GTGACGAAGGCGCCTGACGA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MTHYVSVVIPCYNAANTIGECLSSLEAQTYPREFYEIIVADNGSTDGCLDLIRQKFPQVRIVQAVQKGSGYARNAGIEAA
EGQLIASIDADCVADSKWIATLVEAIERVSDEVAAIGGMIEPYSYKTTIEHFEDFWIKQENLRQGKGLVRYAETPNAIFR
IGPLRVMGGFDGTMGFDDADLGIRLQKAGFRIEFAPGAIVKHRNPSTWHELFRHRRKYGAFNFKLAQKYPELLGDVTDPR
TARRVQLETIRRVCGGIVIKFPLALLTKWDKPSRLWPLADAVAALANYLGYRDAYVAFQRSSHH

Sequences:

>Translated_304_residues
MTHYVSVVIPCYNAANTIGECLSSLEAQTYPREFYEIIVADNGSTDGCLDLIRQKFPQVRIVQAVQKGSGYARNAGIEAA
EGQLIASIDADCVADSKWIATLVEAIERVSDEVAAIGGMIEPYSYKTTIEHFEDFWIKQENLRQGKGLVRYAETPNAIFR
IGPLRVMGGFDGTMGFDDADLGIRLQKAGFRIEFAPGAIVKHRNPSTWHELFRHRRKYGAFNFKLAQKYPELLGDVTDPR
TARRVQLETIRRVCGGIVIKFPLALLTKWDKPSRLWPLADAVAALANYLGYRDAYVAFQRSSHH
>Mature_303_residues
THYVSVVIPCYNAANTIGECLSSLEAQTYPREFYEIIVADNGSTDGCLDLIRQKFPQVRIVQAVQKGSGYARNAGIEAAE
GQLIASIDADCVADSKWIATLVEAIERVSDEVAAIGGMIEPYSYKTTIEHFEDFWIKQENLRQGKGLVRYAETPNAIFRI
GPLRVMGGFDGTMGFDDADLGIRLQKAGFRIEFAPGAIVKHRNPSTWHELFRHRRKYGAFNFKLAQKYPELLGDVTDPRT
ARRVQLETIRRVCGGIVIKFPLALLTKWDKPSRLWPLADAVAALANYLGYRDAYVAFQRSSHH

Specific function: Unknown

COG id: COG1216

COG function: function code R; Predicted glycosyltransferases

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=93, Percent_Identity=38.7096774193548, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 34076; Mature: 33945

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHYVSVVIPCYNAANTIGECLSSLEAQTYPREFYEIIVADNGSTDGCLDLIRQKFPQVR
CCCEEEEEEECCCHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCHHHHHHHHHHCCHHH
IVQAVQKGSGYARNAGIEAAEGQLIASIDADCVADSKWIATLVEAIERVSDEVAAIGGMI
HHHHHHHCCCCCCCCCCCCCCCCEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC
EPYSYKTTIEHFEDFWIKQENLRQGKGLVRYAETPNAIFRIGPLRVMGGFDGTMGFDDAD
CCCCHHHHHHHHHHHHHCHHHHHCCCCEEEECCCCCCEEEECCEEEECCCCCCCCCCCCC
LGIRLQKAGFRIEFAPGAIVKHRNPSTWHELFRHRRKYGAFNFKLAQKYPELLGDVTDPR
CCEEEECCCEEEEECCCCEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC
TARRVQLETIRRVCGGIVIKFPLALLTKWDKPSRLWPLADAVAALANYLGYRDAYVAFQR
HHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHEECC
SSHH
CCCC
>Mature Secondary Structure 
THYVSVVIPCYNAANTIGECLSSLEAQTYPREFYEIIVADNGSTDGCLDLIRQKFPQVR
CCEEEEEEECCCHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCHHHHHHHHHHCCHHH
IVQAVQKGSGYARNAGIEAAEGQLIASIDADCVADSKWIATLVEAIERVSDEVAAIGGMI
HHHHHHHCCCCCCCCCCCCCCCCEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC
EPYSYKTTIEHFEDFWIKQENLRQGKGLVRYAETPNAIFRIGPLRVMGGFDGTMGFDDAD
CCCCHHHHHHHHHHHHHCHHHHHCCCCEEEECCCCCCEEEECCEEEECCCCCCCCCCCCC
LGIRLQKAGFRIEFAPGAIVKHRNPSTWHELFRHRRKYGAFNFKLAQKYPELLGDVTDPR
CCEEEECCCEEEEECCCCEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC
TARRVQLETIRRVCGGIVIKFPLALLTKWDKPSRLWPLADAVAALANYLGYRDAYVAFQR
HHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHEECC
SSHH
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]