| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is pat [H]
Identifier: 182678581
GI number: 182678581
Start: 1813056
End: 1813598
Strand: Reverse
Name: pat [H]
Synonym: Bind_1606
Alternate gene names: 182678581
Gene position: 1813598-1813056 (Counterclockwise)
Preceding gene: 182678583
Following gene: 182678577
Centisome position: 43.49
GC content: 56.72
Gene sequence:
>543_bases TTGCCCACCAATGCACTCGTCGATGGCCTCGTTCTGCGTGATTGCGATGAGAACGATATTCCCGCCATTACAGCAATCTA TAGCCATCATGTGCTCAATGGCTTTGGCACTTTCGAGATCGTACCGCCCGGCGAGGCGGAGATGAAGATCCGCCGCAGGG TCATGTCCACCAATCGCTATCCCTATATCGTCGCCGAATTCGAGCGGAAGGTCGTGGGCTTTGCCTATGTCAACAGCTAC CGACAAAGGCCCGCTTATTCAAAGACCGTTGAGGATTCCATCTATATTCGCGATGGCCTGCAAGGGCAGGGCATTGGACA GCGCCTACTGTCCCGTCTGCTTGCAGAGACGGCTGGAGCGGGTTTTCGTCAAGTCGTCGCGGTCATCGGCGATTCCGAAA ATCACGCCTCGATCCGGCTACACGAGAAGCTCGGCTTCCAGCATGCCGGCACGCTCAAGACGGTAGGCTGGAAAAACGGC CGCTGGCTTGACACGGTCCTTATGCAATTACCGCTCGGCGATGGAGCCAGTACCCCGCTGTAA
Upstream 100 bases:
>100_bases ACCTTGCCACGCGCACGCAATTTGCACTAAATCCAAGTGCTGGCGTGACCCATTGGCTCCGTCCTGCACTGCAATTCTTC CTGTCAAGAAAGTAGCCTGC
Downstream 100 bases:
>100_bases TTACAGCGGGGTACTGGCTCCATCTCCACGCCTGCGATGCGCGTGCTCAGGAGCGCGCCATGAGTTCCACCGCCAATCCA TAAATACGGCTGCGCCCCGG
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: PPT N-acetyltransferase; Phosphinothricin-resistance protein [H]
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MPTNALVDGLVLRDCDENDIPAITAIYSHHVLNGFGTFEIVPPGEAEMKIRRRVMSTNRYPYIVAEFERKVVGFAYVNSY RQRPAYSKTVEDSIYIRDGLQGQGIGQRLLSRLLAETAGAGFRQVVAVIGDSENHASIRLHEKLGFQHAGTLKTVGWKNG RWLDTVLMQLPLGDGASTPL
Sequences:
>Translated_180_residues MPTNALVDGLVLRDCDENDIPAITAIYSHHVLNGFGTFEIVPPGEAEMKIRRRVMSTNRYPYIVAEFERKVVGFAYVNSY RQRPAYSKTVEDSIYIRDGLQGQGIGQRLLSRLLAETAGAGFRQVVAVIGDSENHASIRLHEKLGFQHAGTLKTVGWKNG RWLDTVLMQLPLGDGASTPL >Mature_179_residues PTNALVDGLVLRDCDENDIPAITAIYSHHVLNGFGTFEIVPPGEAEMKIRRRVMSTNRYPYIVAEFERKVVGFAYVNSYR QRPAYSKTVEDSIYIRDGLQGQGIGQRLLSRLLAETAGAGFRQVVAVIGDSENHASIRLHEKLGFQHAGTLKTVGWKNGR WLDTVLMQLPLGDGASTPL
Specific function: This enzyme is an effector of phosphinothricin tripeptide (PTT or bialaphos) resistance. Inactivates PTT by transfer of an acetyl group [H]
COG id: COG1247
COG function: function code M; Sortase and related acyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1787719, Length=167, Percent_Identity=35.3293413173653, Blast_Score=92, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.183 [H]
Molecular weight: Translated: 19957; Mature: 19826
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTNALVDGLVLRDCDENDIPAITAIYSHHVLNGFGTFEIVPPGEAEMKIRRRVMSTNRY CCCCHHHCCHHEECCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCC PYIVAEFERKVVGFAYVNSYRQRPAYSKTVEDSIYIRDGLQGQGIGQRLLSRLLAETAGA CEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCC GFRQVVAVIGDSENHASIRLHEKLGFQHAGTLKTVGWKNGRWLDTVLMQLPLGDGASTPL CHHHHHHHHCCCCCCCEEEEHHHCCCCCCCCEEECCCCCCCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure PTNALVDGLVLRDCDENDIPAITAIYSHHVLNGFGTFEIVPPGEAEMKIRRRVMSTNRY CCCHHHCCHHEECCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCC PYIVAEFERKVVGFAYVNSYRQRPAYSKTVEDSIYIRDGLQGQGIGQRLLSRLLAETAGA CEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCC GFRQVVAVIGDSENHASIRLHEKLGFQHAGTLKTVGWKNGRWLDTVLMQLPLGDGASTPL CHHHHHHHHCCCCCCCEEEEHHHCCCCCCCCEEECCCCCCCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA