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The map label for this gene is aapJ [H]

Identifier: 182678577

GI number: 182678577

Start: 1807404

End: 1808414

Strand: Reverse

Name: aapJ [H]

Synonym: Bind_1602

Alternate gene names: 182678577

Gene position: 1808414-1807404 (Counterclockwise)

Preceding gene: 182678581

Following gene: 182678576

Centisome position: 43.37

GC content: 57.17

Gene sequence:

>1011_bases
ATGTTCAAATCCATCGTTTCCGCGGGCCTGTTCAGCCTCTGCGTGACGACCGGCGCCCTCGCCGGCACACTCGACGAAGT
CAAGGGACGCGGTTTCCTGAATTGTGGCTCCAACCCCGGTCTCGCGGGCTTCGGCCTGCCGGACGACAAGGGTCAATGGG
TCGGTTTCGATATCGATTTCTGCCGTGCCGTCGCGGCGGCGATTTTCGATGATCCCACCAAGGTCAAATTCCTGCCGCTC
AGCGGCAAGGATCGTTTCACCGCGCTGCAATCAGGCGAAATCGATATTCTCTCGCGGAATACGACCTGGACCCAATCCCG
CGAAGTGGGGCAGGGGTTCCTGTTTACCGGCATTACCTATTATGACGGTCAGGGTTTTATGACCCATCGCAAGCTCAACC
TGACGTCCGCGCTTGAACTTGCTGGAGCCTCGATCTGTGTTCAGCAGGGAACGACGACGGAACTCAATCTCGCCGATTTC
TTCCGCGCCAATAATCTGCAGTATGAGCCAGTGAATTTCGCGACTGGCGATGAAGCCCTGAAAGCCTATGATACCGGCCG
TTGCGATGCTCTGACCACGGATGCATCCGGCCTTTACGCCCAGCGCGCCAAACTCGCCAATCCGGATGATCATGTCGTTC
TGCCCGAAATCATCTCCAAGGAGCCGCTCGGCCCCCTGGTGCGTCAAGGCGACGATCAATGGTTCAACCTTGTGAAATGG
GTGCATTTCGCCTGGCTCAACGCCGAGGAAGACGGCGTGACCTCGAAAAACCTGGACGAGAAGACGAAATCGGAAAGTCC
GGAGATCAAGCGCCTGCTCGGTTTCGAAGGCAATTTCGGCGAAGGACTCGGCCTGACGCGCGACTGGATCTATCGCATCA
TCAAACATGTCGGCAATTATGGCGAGGTTTTCGACCGCAATCTCGGCGAAGGCTCGAAACTGAAAATCAAGCGCGGCATC
AACAATCTCTGGACGAAGGGCGGATTGCATTATGCGCCGCCGGTCCGCTGA

Upstream 100 bases:

>100_bases
AGGGATTGCCGAGGTTCAAGTCTTTTCCGGAAAAGTGGAATTCACTCTTCCAGAAGGACTAGCCCACGGTGTCTTACTCG
ATCGAAACCGGATTGCCTTC

Downstream 100 bases:

>100_bases
TCCGGTCAAATAGCATGAGCCTGTCCGATCAATCCGCGACCGACCGCGCGACGCTCCTCGCCGTCTGGCGCGATCCACGT
AAACGCGGTTTCATCGTACA

Product: cationic amino acid ABC transporter periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MFKSIVSAGLFSLCVTTGALAGTLDEVKGRGFLNCGSNPGLAGFGLPDDKGQWVGFDIDFCRAVAAAIFDDPTKVKFLPL
SGKDRFTALQSGEIDILSRNTTWTQSREVGQGFLFTGITYYDGQGFMTHRKLNLTSALELAGASICVQQGTTTELNLADF
FRANNLQYEPVNFATGDEALKAYDTGRCDALTTDASGLYAQRAKLANPDDHVVLPEIISKEPLGPLVRQGDDQWFNLVKW
VHFAWLNAEEDGVTSKNLDEKTKSESPEIKRLLGFEGNFGEGLGLTRDWIYRIIKHVGNYGEVFDRNLGEGSKLKIKRGI
NNLWTKGGLHYAPPVR

Sequences:

>Translated_336_residues
MFKSIVSAGLFSLCVTTGALAGTLDEVKGRGFLNCGSNPGLAGFGLPDDKGQWVGFDIDFCRAVAAAIFDDPTKVKFLPL
SGKDRFTALQSGEIDILSRNTTWTQSREVGQGFLFTGITYYDGQGFMTHRKLNLTSALELAGASICVQQGTTTELNLADF
FRANNLQYEPVNFATGDEALKAYDTGRCDALTTDASGLYAQRAKLANPDDHVVLPEIISKEPLGPLVRQGDDQWFNLVKW
VHFAWLNAEEDGVTSKNLDEKTKSESPEIKRLLGFEGNFGEGLGLTRDWIYRIIKHVGNYGEVFDRNLGEGSKLKIKRGI
NNLWTKGGLHYAPPVR
>Mature_336_residues
MFKSIVSAGLFSLCVTTGALAGTLDEVKGRGFLNCGSNPGLAGFGLPDDKGQWVGFDIDFCRAVAAAIFDDPTKVKFLPL
SGKDRFTALQSGEIDILSRNTTWTQSREVGQGFLFTGITYYDGQGFMTHRKLNLTSALELAGASICVQQGTTTELNLADF
FRANNLQYEPVNFATGDEALKAYDTGRCDALTTDASGLYAQRAKLANPDDHVVLPEIISKEPLGPLVRQGDDQWFNLVKW
VHFAWLNAEEDGVTSKNLDEKTKSESPEIKRLLGFEGNFGEGLGLTRDWIYRIIKHVGNYGEVFDRNLGEGSKLKIKRGI
NNLWTKGGLHYAPPVR

Specific function: Part of a binding-protein-dependent transport system for L-amino acids, affects the uptake as well as efflux of these amino acids [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786876, Length=221, Percent_Identity=23.0769230769231, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005768
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 36915; Mature: 36915

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKSIVSAGLFSLCVTTGALAGTLDEVKGRGFLNCGSNPGLAGFGLPDDKGQWVGFDIDF
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCEEEECHHH
CRAVAAAIFDDPTKVKFLPLSGKDRFTALQSGEIDILSRNTTWTQSREVGQGFLFTGITY
HHHHHHHHHCCCCCEEEEECCCCCCEEEECCCCEEEEECCCCCCHHHHHCCCEEEEEEEE
YDGQGFMTHRKLNLTSALELAGASICVQQGTTTELNLADFFRANNLQYEPVNFATGDEAL
ECCCCEEEEEECCHHHHHHHHCCEEEEECCCCCEECHHHHHHCCCCEECCCCCCCCHHHH
KAYDTGRCDALTTDASGLYAQRAKLANPDDHVVLPEIISKEPLGPLVRQGDDQWFNLVKW
HHHCCCCCCEEECCCCCHHHHHHHCCCCCCCEECHHHHCCCCCCHHHHCCCHHHHHHHHH
VHFAWLNAEEDGVTSKNLDEKTKSESPEIKRLLGFEGNFGEGLGLTRDWIYRIIKHVGNY
HHHHEECCCCCCCCCCCCCHHHCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCH
GEVFDRNLGEGSKLKIKRGINNLWTKGGLHYAPPVR
HHHHHCCCCCCCEEEEECCCHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MFKSIVSAGLFSLCVTTGALAGTLDEVKGRGFLNCGSNPGLAGFGLPDDKGQWVGFDIDF
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCEEEECHHH
CRAVAAAIFDDPTKVKFLPLSGKDRFTALQSGEIDILSRNTTWTQSREVGQGFLFTGITY
HHHHHHHHHCCCCCEEEEECCCCCCEEEECCCCEEEEECCCCCCHHHHHCCCEEEEEEEE
YDGQGFMTHRKLNLTSALELAGASICVQQGTTTELNLADFFRANNLQYEPVNFATGDEAL
ECCCCEEEEEECCHHHHHHHHCCEEEEECCCCCEECHHHHHHCCCCEECCCCCCCCHHHH
KAYDTGRCDALTTDASGLYAQRAKLANPDDHVVLPEIISKEPLGPLVRQGDDQWFNLVKW
HHHCCCCCCEEECCCCCHHHHHHHCCCCCCCEECHHHHCCCCCCHHHHCCCHHHHHHHHH
VHFAWLNAEEDGVTSKNLDEKTKSESPEIKRLLGFEGNFGEGLGLTRDWIYRIIKHVGNY
HHHHEECCCCCCCCCCCCCHHHCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCH
GEVFDRNLGEGSKLKIKRGINNLWTKGGLHYAPPVR
HHHHHCCCCCCCEEEEECCCHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8898392 [H]