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The map label for this gene is bkdR [H]

Identifier: 182678506

GI number: 182678506

Start: 1733488

End: 1733961

Strand: Direct

Name: bkdR [H]

Synonym: Bind_1530

Alternate gene names: 182678506

Gene position: 1733488-1733961 (Clockwise)

Preceding gene: 182678502

Following gene: 182678515

Centisome position: 41.57

GC content: 55.91

Gene sequence:

>474_bases
ATGCCAAAACCAGACATTGACGAAATCGACCGGAAAATTCTGGCTGCTTTGCAGGCCGATGCGCATATGACGACGGAAAA
ATTGAGCGAGATCGTGGGGCTGTCCCCCTCTCCTTGCGCACGGCGGGTTCGGATGCTGGAAGCCGCCGGGGTGATCAAGG
CTTATGTCGCCGTCGTCGATCAGGTGAAAGTCGGTCTGCCGATCAGCGTCTTCGCGTCCATCAAATTGGAAAGGCAAAGG
GAGGAGGAGCTTGATCGGTTCGCCAGCGCGGTGATGCGCTGGCCCGAAATCGTCGAATGCTATCTCATGACCGGCCAGCG
CGATTATCTGCTTCGCATCGTGGTGAAGGATCTCGAAGCCTATGAGACCTTTTTGAAGCAGAAGCTGACCCGTCTGGAAG
GGGTTGCCTCGATTGAATCCAGTTTCGCGCTCGGCCAGATCAAGAATGCCCAGGCTTTGCCTATTCCCACATAG

Upstream 100 bases:

>100_bases
GACGATAAGTTTTTCTTGGAGGGGATTGCGACTAAATTGAGCTTAAACTAGCTTCATTAATAGCTTAAACAGCTAAAATT
ATTATTGAGATAACTCATTC

Downstream 100 bases:

>100_bases
ATCCTTTTCATGTTTCATCGAATTAGGCGTGGGCGAAACAAAGCTCACCCTCTGAGAGCCTGAGCGGCACTTTCCTCGGT
CCAGGCCTCGACGATCTGGC

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MPKPDIDEIDRKILAALQADAHMTTEKLSEIVGLSPSPCARRVRMLEAAGVIKAYVAVVDQVKVGLPISVFASIKLERQR
EEELDRFASAVMRWPEIVECYLMTGQRDYLLRIVVKDLEAYETFLKQKLTRLEGVASIESSFALGQIKNAQALPIPT

Sequences:

>Translated_157_residues
MPKPDIDEIDRKILAALQADAHMTTEKLSEIVGLSPSPCARRVRMLEAAGVIKAYVAVVDQVKVGLPISVFASIKLERQR
EEELDRFASAVMRWPEIVECYLMTGQRDYLLRIVVKDLEAYETFLKQKLTRLEGVASIESSFALGQIKNAQALPIPT
>Mature_156_residues
PKPDIDEIDRKILAALQADAHMTTEKLSEIVGLSPSPCARRVRMLEAAGVIKAYVAVVDQVKVGLPISVFASIKLERQRE
EELDRFASAVMRWPEIVECYLMTGQRDYLLRIVVKDLEAYETFLKQKLTRLEGVASIESSFALGQIKNAQALPIPT

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=38, Blast_Score=120, Evalue=5e-29,
Organism=Escherichia coli, GI1787116, Length=156, Percent_Identity=39.1025641025641, Blast_Score=117, Evalue=3e-28,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17572; Mature: 17441

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKPDIDEIDRKILAALQADAHMTTEKLSEIVGLSPSPCARRVRMLEAAGVIKAYVAVVD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QVKVGLPISVFASIKLERQREEELDRFASAVMRWPEIVECYLMTGQRDYLLRIVVKDLEA
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
YETFLKQKLTRLEGVASIESSFALGQIKNAQALPIPT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
PKPDIDEIDRKILAALQADAHMTTEKLSEIVGLSPSPCARRVRMLEAAGVIKAYVAVVD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QVKVGLPISVFASIKLERQREEELDRFASAVMRWPEIVECYLMTGQRDYLLRIVVKDLEA
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
YETFLKQKLTRLEGVASIESSFALGQIKNAQALPIPT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]