| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is hflX [H]
Identifier: 182678502
GI number: 182678502
Start: 1727458
End: 1728858
Strand: Direct
Name: hflX [H]
Synonym: Bind_1526
Alternate gene names: 182678502
Gene position: 1727458-1728858 (Clockwise)
Preceding gene: 182678501
Following gene: 182678506
Centisome position: 41.42
GC content: 61.03
Gene sequence:
>1401_bases TTGCCGGGTGAATCCAACAAGGGTTCACCCGCTCTTACGCGGGCCGCCAAGACCCGCGCTATGGTTGTCGGCCCTTATCT CAATCAGCGCGCAACGCAGCCCCATGGCCGATCGGCTGTTGCCCTTCCGGAGAAGGCGTTCCGGTCGCCGCAGGCGCGTT TCGACGAAGTGCTTGGCCTCGCCGAAGCGCTCGACCTCGATATTGTCGACCAGCGCCTTTTGACGCTGGCTGAGATCAAG CCCTCGACCTTCCTCGGCACCGGCAAGGTGGCCGAACTGGGTGAGGCCATCAAGGCCGCGGAGGCCGAGCTGGTCATCAT GGACTGCGCCTTGTCTCCCGTGCAGCAGCGCAATCTTGAAAAAGCGCTCGGGGCCAAGGTGATCGATAGGACCGGCCTGA TCCTCGAAATCTTCGGCCGCAGGGCGCGCACGCGCGAAGGCAGCTTGCAAGTCGAACTTGCTCATCTCGCCTATCAGAAA TCACGTTTGGTGCGGTCCTGGACCCATCTCGAACGCCAGCGCGGCGGTTTCGGCTTCCTCGGCGGTCCTGGCGAAACGCA AATCGAGGCCGACCGGCGCTTGTTGCAGGAACGCATGACGCGACTCGAGCAAGATCTTGCCGGAGTTAAGCGGACACGCG GCCTGCACCGCAAGACGCGGCGTGATGTGCCTTACCCGATCATTGCGCTTGTCGGTTACACCAATGCCGGCAAATCGACC CTGTTCAACCGTCTGACCGAGGCGGATGTGCTGGCGCAGAACATGCTCTTTGCGACGCTTGATCCGACCTTGCGGAGCCT CACCTTGCCGCATGGGGCCAAGGTGATTCTCTCCGATACGGTGGGGTTCATTTCGGATCTGCCGACGATGCTGGTTTCAG CTTTCCGCGCGACCCTTGAGGAGGTGCTGGAAGCCGATCTTATCCTGCACGTGCGCGATATCGCCCATCAGGATGCCGAG GCCCAGTGTCAGGATGTGGAAAGTGTGCTCGCCGAACTCGGCATTGACATGGCCGACGAGCAGAGAATTCTGGAAGTCTG GAACAAAGCTGATCTCCTCGATGAGGAGGCGCAAGCAGCAGCGCTCAATAATGCCAGGCGCTGGAAGAATGCCGAAAACC AGCCGATTCTCGTCTCAGCGCTGACAGGGCAGGGAGTCGCAACCCTGGAGGCTGAAATCGAGGCGAGGCTTGCGCGGGGA CGCCTGCTGTTCGATATCACGCTCGACCCGGCCAATGGCGAGGGCCTGCATTGGCTGCACGAACATACTGAGGTCATGCA CAAAAGCATTGATGAGGATGGCACCATCCATGTCTCAGTGAGGGTGGCGCCGGAACGAGCTGAGCCGATCAAGCGGCGCT TTGGCGCGATGCTGGTCGAGCGGGAAGGTTTAACCGCCTGA
Upstream 100 bases:
>100_bases GGGAGAATCGGCTTCTACCGGTTTATTTTTGCGGACACAGGAGTTTCCCATAGACGCACCGACCGTTTCACCTTCGGCCA GATTTTCGGGGACGAAGGGT
Downstream 100 bases:
>100_bases TTTCTCGCTTTCCTTGGCCTGTTGCCATAGGGCATCCATTTCGGCCAGGTTCGCCTCTTCCAGCGTTTTGCCTTGCTCTC TCAGCGCCGTTTCGATGAAA
Product: GTP-binding proten HflX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 466; Mature: 465
Protein sequence:
>466_residues MPGESNKGSPALTRAAKTRAMVVGPYLNQRATQPHGRSAVALPEKAFRSPQARFDEVLGLAEALDLDIVDQRLLTLAEIK PSTFLGTGKVAELGEAIKAAEAELVIMDCALSPVQQRNLEKALGAKVIDRTGLILEIFGRRARTREGSLQVELAHLAYQK SRLVRSWTHLERQRGGFGFLGGPGETQIEADRRLLQERMTRLEQDLAGVKRTRGLHRKTRRDVPYPIIALVGYTNAGKST LFNRLTEADVLAQNMLFATLDPTLRSLTLPHGAKVILSDTVGFISDLPTMLVSAFRATLEEVLEADLILHVRDIAHQDAE AQCQDVESVLAELGIDMADEQRILEVWNKADLLDEEAQAAALNNARRWKNAENQPILVSALTGQGVATLEAEIEARLARG RLLFDITLDPANGEGLHWLHEHTEVMHKSIDEDGTIHVSVRVAPERAEPIKRRFGAMLVEREGLTA
Sequences:
>Translated_466_residues MPGESNKGSPALTRAAKTRAMVVGPYLNQRATQPHGRSAVALPEKAFRSPQARFDEVLGLAEALDLDIVDQRLLTLAEIK PSTFLGTGKVAELGEAIKAAEAELVIMDCALSPVQQRNLEKALGAKVIDRTGLILEIFGRRARTREGSLQVELAHLAYQK SRLVRSWTHLERQRGGFGFLGGPGETQIEADRRLLQERMTRLEQDLAGVKRTRGLHRKTRRDVPYPIIALVGYTNAGKST LFNRLTEADVLAQNMLFATLDPTLRSLTLPHGAKVILSDTVGFISDLPTMLVSAFRATLEEVLEADLILHVRDIAHQDAE AQCQDVESVLAELGIDMADEQRILEVWNKADLLDEEAQAAALNNARRWKNAENQPILVSALTGQGVATLEAEIEARLARG RLLFDITLDPANGEGLHWLHEHTEVMHKSIDEDGTIHVSVRVAPERAEPIKRRFGAMLVEREGLTA >Mature_465_residues PGESNKGSPALTRAAKTRAMVVGPYLNQRATQPHGRSAVALPEKAFRSPQARFDEVLGLAEALDLDIVDQRLLTLAEIKP STFLGTGKVAELGEAIKAAEAELVIMDCALSPVQQRNLEKALGAKVIDRTGLILEIFGRRARTREGSLQVELAHLAYQKS RLVRSWTHLERQRGGFGFLGGPGETQIEADRRLLQERMTRLEQDLAGVKRTRGLHRKTRRDVPYPIIALVGYTNAGKSTL FNRLTEADVLAQNMLFATLDPTLRSLTLPHGAKVILSDTVGFISDLPTMLVSAFRATLEEVLEADLILHVRDIAHQDAEA QCQDVESVLAELGIDMADEQRILEVWNKADLLDEEAQAAALNNARRWKNAENQPILVSALTGQGVATLEAEIEARLARGR LLFDITLDPANGEGLHWLHEHTEVMHKSIDEDGTIHVSVRVAPERAEPIKRRFGAMLVEREGLTA
Specific function: Unknown
COG id: COG2262
COG function: function code R; GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI310133118, Length=289, Percent_Identity=37.0242214532872, Blast_Score=151, Evalue=2e-36, Organism=Homo sapiens, GI310133116, Length=298, Percent_Identity=35.9060402684564, Blast_Score=148, Evalue=9e-36, Organism=Homo sapiens, GI310124269, Length=266, Percent_Identity=37.218045112782, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI310124267, Length=266, Percent_Identity=37.218045112782, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI310124171, Length=266, Percent_Identity=37.218045112782, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI310124169, Length=266, Percent_Identity=37.218045112782, Blast_Score=147, Evalue=2e-35, Organism=Escherichia coli, GI1790615, Length=364, Percent_Identity=45.6043956043956, Blast_Score=286, Evalue=2e-78, Organism=Caenorhabditis elegans, GI17561038, Length=283, Percent_Identity=33.5689045936396, Blast_Score=142, Evalue=5e-34, Organism=Drosophila melanogaster, GI24650079, Length=468, Percent_Identity=30.1282051282051, Blast_Score=161, Evalue=1e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR016496 - InterPro: IPR006073 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 51390; Mature: 51258
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGESNKGSPALTRAAKTRAMVVGPYLNQRATQPHGRSAVALPEKAFRSPQARFDEVLGL CCCCCCCCCHHHHHHHHCCEEEECCCHHCCCCCCCCCCEEECCHHHHCCHHHHHHHHHHH AEALDLDIVDQRLLTLAEIKPSTFLGTGKVAELGEAIKAAEAELVIMDCALSPVQQRNLE HHHHCHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHH KALGAKVIDRTGLILEIFGRRARTREGSLQVELAHLAYQKSRLVRSWTHLERQRGGFGFL HHHHHHHHHCCCHHHHHHCCHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCC GGPGETQIEADRRLLQERMTRLEQDLAGVKRTRGLHRKTRRDVPYPIIALVGYTNAGKST CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHH LFNRLTEADVLAQNMLFATLDPTLRSLTLPHGAKVILSDTVGFISDLPTMLVSAFRATLE HHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH EVLEADLILHVRDIAHQDAEAQCQDVESVLAELGIDMADEQRILEVWNKADLLDEEAQAA HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHH ALNNARRWKNAENQPILVSALTGQGVATLEAEIEARLARGRLLFDITLDPANGEGLHWLH HHHHHHHHCCCCCCCEEEEEECCCCEEEHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHH EHTEVMHKSIDEDGTIHVSVRVAPERAEPIKRRFGAMLVEREGLTA HHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PGESNKGSPALTRAAKTRAMVVGPYLNQRATQPHGRSAVALPEKAFRSPQARFDEVLGL CCCCCCCCHHHHHHHHCCEEEECCCHHCCCCCCCCCCEEECCHHHHCCHHHHHHHHHHH AEALDLDIVDQRLLTLAEIKPSTFLGTGKVAELGEAIKAAEAELVIMDCALSPVQQRNLE HHHHCHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHH KALGAKVIDRTGLILEIFGRRARTREGSLQVELAHLAYQKSRLVRSWTHLERQRGGFGFL HHHHHHHHHCCCHHHHHHCCHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCC GGPGETQIEADRRLLQERMTRLEQDLAGVKRTRGLHRKTRRDVPYPIIALVGYTNAGKST CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHH LFNRLTEADVLAQNMLFATLDPTLRSLTLPHGAKVILSDTVGFISDLPTMLVSAFRATLE HHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH EVLEADLILHVRDIAHQDAEAQCQDVESVLAELGIDMADEQRILEVWNKADLLDEEAQAA HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHH ALNNARRWKNAENQPILVSALTGQGVATLEAEIEARLARGRLLFDITLDPANGEGLHWLH HHHHHHHHCCCCCCCEEEEEECCCCEEEHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHH EHTEVMHKSIDEDGTIHVSVRVAPERAEPIKRRFGAMLVEREGLTA HHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8248183; 7610040; 9278503; 2020545; 3040675 [H]