| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
Click here to switch to the map view.
The map label for this gene is 182678428
Identifier: 182678428
GI number: 182678428
Start: 1653554
End: 1654102
Strand: Direct
Name: 182678428
Synonym: Bind_1446
Alternate gene names: NA
Gene position: 1653554-1654102 (Clockwise)
Preceding gene: 182678424
Following gene: 182678432
Centisome position: 39.65
GC content: 51.37
Gene sequence:
>549_bases ATGCATCTGGTAAAAGACTGTTTCCGCCCATGGCGGCGTGGCGTTATTTTTTCTGGCGCGCTCGCCCTTTGTTTTGCTCT GAGCCAGGTTCAGGCCAAGGCGGCTGGTATCGTGAAGGTCATATTCCTGCATCCACAAAATTATTCGGATCCAGCTTTCC GTAATACCACAAGCGTGACGCCACCTTGGCAAGTGATGAACGAGCTCGGTCAGGCGATACAACGAATGGGACAGGTCTAT CTGTCAGATGACCAGACGCTCACTGTGGAAGTGCTGAATATTCAATTGGCTAGATATTACAATTCGTGGGCATTTCCCGG CAATCAAGCGCGCTATCTGAGCCATACGCGGCCGCCACCAAGCATCAGGTTGCGCTATACGCTGAAGGTCAATGGCGTGG TGATCATCGCCGCTGAGGAAACGCTCTCCGACATCAATTATTTGCTCGACCCGCTGGCCCCCCATTCAAGCAATGCGTTG TCTTATGAAAAAGCTTTGCTGGATGAATGGTTTCAGAAAAGATTCGTACGGATGGAACCCGCGATCTAG
Upstream 100 bases:
>100_bases GGCGAGATCATCGGTTGTCCCGAAAATCTTACCCGAGCGCATTCCCCTCTCGTCCACATCCTACCGTCACTTGTGGGTGG TCCCCACGGAGCCTTGATCA
Downstream 100 bases:
>100_bases AGCATCAGACCCAAAAGTGGTTTCCACTTTTGGGTCTGATGCGGTCAATAAAGTCTTGCAGCATCGCCCAAGAAACTGAA CGAACGAGCGATGCTGTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MHLVKDCFRPWRRGVIFSGALALCFALSQVQAKAAGIVKVIFLHPQNYSDPAFRNTTSVTPPWQVMNELGQAIQRMGQVY LSDDQTLTVEVLNIQLARYYNSWAFPGNQARYLSHTRPPPSIRLRYTLKVNGVVIIAAEETLSDINYLLDPLAPHSSNAL SYEKALLDEWFQKRFVRMEPAI
Sequences:
>Translated_182_residues MHLVKDCFRPWRRGVIFSGALALCFALSQVQAKAAGIVKVIFLHPQNYSDPAFRNTTSVTPPWQVMNELGQAIQRMGQVY LSDDQTLTVEVLNIQLARYYNSWAFPGNQARYLSHTRPPPSIRLRYTLKVNGVVIIAAEETLSDINYLLDPLAPHSSNAL SYEKALLDEWFQKRFVRMEPAI >Mature_182_residues MHLVKDCFRPWRRGVIFSGALALCFALSQVQAKAAGIVKVIFLHPQNYSDPAFRNTTSVTPPWQVMNELGQAIQRMGQVY LSDDQTLTVEVLNIQLARYYNSWAFPGNQARYLSHTRPPPSIRLRYTLKVNGVVIIAAEETLSDINYLLDPLAPHSSNAL SYEKALLDEWFQKRFVRMEPAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20724; Mature: 20724
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLVKDCFRPWRRGVIFSGALALCFALSQVQAKAAGIVKVIFLHPQNYSDPAFRNTTSVT CCHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCC PPWQVMNELGQAIQRMGQVYLSDDQTLTVEVLNIQLARYYNSWAFPGNQARYLSHTRPPP CCHHHHHHHHHHHHHHCCEEECCCCEEEEEEEHHHHHHHHCCCCCCCCCCHHCCCCCCCC SIRLRYTLKVNGVVIIAAEETLSDINYLLDPLAPHSSNALSYEKALLDEWFQKRFVRMEP CEEEEEEEEECCEEEEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC AI CC >Mature Secondary Structure MHLVKDCFRPWRRGVIFSGALALCFALSQVQAKAAGIVKVIFLHPQNYSDPAFRNTTSVT CCHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCC PPWQVMNELGQAIQRMGQVYLSDDQTLTVEVLNIQLARYYNSWAFPGNQARYLSHTRPPP CCHHHHHHHHHHHHHHCCEEECCCCEEEEEEEHHHHHHHHCCCCCCCCCCHHCCCCCCCC SIRLRYTLKVNGVVIIAAEETLSDINYLLDPLAPHSSNALSYEKALLDEWFQKRFVRMEP CEEEEEEEEECCEEEEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC AI CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA